RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 ZNF688P0C7X2 276 aa17.23■□□□□ 0.35
SUMO3-205ENST00000466861 ID1P41134 155 aa17.23■□□□□ 0.35
SUMO3-205ENST00000466861 PATE2Q6UY27 113 aa17.23■□□□□ 0.35
SUMO3-205ENST00000466861 RCHY1Q96PM5 261 aa17.23■□□□□ 0.35
SUMO3-205ENST00000466861 PFDN5Q99471 154 aa17.23■□□□□ 0.35
SUMO3-205ENST00000466861 SCRT1Q9BWW7 348 aa17.23■□□□□ 0.35
SUMO3-205ENST00000466861 SLC25A22Q9H936 323 aa17.23■□□□□ 0.35
SUMO3-205ENST00000466861 DNAJC4Q9NNZ3 241 aa17.23■□□□□ 0.35
SUMO3-205ENST00000466861 ISLRO14498 428 aa17.22■□□□□ 0.35
SUMO3-205ENST00000466861 COX7A2P2O60397 106 aa17.22■□□□□ 0.35
SUMO3-205ENST00000466861 PSMB3P49720 205 aa17.22■□□□□ 0.35
SUMO3-205ENST00000466861 B2MP61769 119 aa17.22■□□□□ 0.35
SUMO3-205ENST00000466861 Q6ZWC4 215 aa17.22■□□□□ 0.35
SUMO3-205ENST00000466861 ATP5SQ99766 215 aa17.22■□□□□ 0.35
SUMO3-205ENST00000466861 SLC39A9Q9NUM3 307 aa17.22■□□□□ 0.35
SUMO3-205ENST00000466861 SOCS3O14543 225 aa17.21■□□□□ 0.35
SUMO3-205ENST00000466861 CLINT1Q14677 625 aa17.21■□□□□ 0.35
SUMO3-205ENST00000466861 C10orf113Q5VZT2 155 aa17.21■□□□□ 0.35
SUMO3-205ENST00000466861 MIC13Q5XKP0 118 aa17.21■□□□□ 0.35
SUMO3-205ENST00000466861 NPCDR1Q9BY65 106 aa17.21■□□□□ 0.35
SUMO3-205ENST00000466861 PARD6GQ9BYG4 376 aaPredicted RBP17.21■□□□□ 0.35
SUMO3-205ENST00000466861 WDR61Q9GZS3 305 aaKnown RBP17.21■□□□□ 0.35
SUMO3-205ENST00000466861 LINC00305Q7Z4B0 112 aa17.2■□□□□ 0.34
SUMO3-205ENST00000466861 ZNF709Q8N972 641 aa17.2■□□□□ 0.34
SUMO3-205ENST00000466861 GATAD1Q8WUU5 269 aa17.2■□□□□ 0.34
SUMO3-205ENST00000466861 TMEM37Q8WXS4 190 aa17.2■□□□□ 0.34
SUMO3-205ENST00000466861 UHRF2Q96PU4 802 aa17.2■□□□□ 0.34
SUMO3-205ENST00000466861 TP53TG1Q9Y2A0 90 aa17.2■□□□□ 0.34
SUMO3-205ENST00000466861 PXMP4Q9Y6I8 212 aa17.2■□□□□ 0.34
SUMO3-205ENST00000466861 ZNF124Q15973 351 aa17.19■□□□□ 0.34
SUMO3-205ENST00000466861 PSMG4Q5JS54 123 aa17.19■□□□□ 0.34
SUMO3-205ENST00000466861 LEMD1Q68G75 181 aa17.19■□□□□ 0.34
SUMO3-205ENST00000466861 STHQ8IWL8 128 aa17.19■□□□□ 0.34
SUMO3-205ENST00000466861 RSG1Q9BU20 258 aa17.19■□□□□ 0.34
SUMO3-205ENST00000466861 AGRNO00468 2067 aa17.18■□□□□ 0.34
SUMO3-205ENST00000466861 A0A087X0K7 114 aa17.18■□□□□ 0.34
SUMO3-205ENST00000466861 C17orf112F2Z3M2 114 aa17.18■□□□□ 0.34
SUMO3-205ENST00000466861 WWC2-AS2Q96NR7 200 aa17.18■□□□□ 0.34
SUMO3-205ENST00000466861 AQP10Q96PS8 301 aa17.18■□□□□ 0.34
SUMO3-205ENST00000466861 CSTL1Q9H114 145 aa17.18■□□□□ 0.34
SUMO3-205ENST00000466861 IFNA5P01569 189 aa17.17■□□□□ 0.34
SUMO3-205ENST00000466861 ATF4P18848 351 aaPredicted RBP17.17■□□□□ 0.34
SUMO3-205ENST00000466861 TMEM41BQ5BJD5 291 aa17.17■□□□□ 0.34
SUMO3-205ENST00000466861 SPATA31B1PQ5VZV4 182 aa17.17■□□□□ 0.34
SUMO3-205ENST00000466861 BPIFA4PQ86YQ2 179 aa17.17■□□□□ 0.34
SUMO3-205ENST00000466861 HUWE1Q7Z6Z7 4374 aaKnown RBP17.17■□□□□ 0.34
SUMO3-205ENST00000466861 MRPS12O15235 138 aaKnown RBP17.16■□□□□ 0.34
SUMO3-205ENST00000466861 RPL35AP18077 110 aaKnown RBP17.16■□□□□ 0.34
SUMO3-205ENST00000466861 CXCL2P19875 107 aa17.16■□□□□ 0.34
SUMO3-205ENST00000466861 MORN3Q6PF18 240 aaPredicted RBP17.16■□□□□ 0.34
SUMO3-205ENST00000466861 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.16■□□□□ 0.34
SUMO3-205ENST00000466861 TRPT1Q86TN4 253 aaKnown RBP17.16■□□□□ 0.34
SUMO3-205ENST00000466861 C16orf92Q96LL3 132 aa17.16■□□□□ 0.34
SUMO3-205ENST00000466861 STAB2Q8WWQ8 2551 aa17.15■□□□□ 0.34
SUMO3-205ENST00000466861 SPP1P10451 314 aa17.15■□□□□ 0.34
SUMO3-205ENST00000466861 OR2T35Q8NGX2 323 aa17.15■□□□□ 0.34
SUMO3-205ENST00000466861 SCGB1C1Q8TD33 95 aa17.15■□□□□ 0.34
SUMO3-205ENST00000466861 C17orf77Q96MU5 243 aa17.15■□□□□ 0.34
SUMO3-205ENST00000466861 CLUHP3Q96NS8 147 aa17.15■□□□□ 0.34
SUMO3-205ENST00000466861 FOXI2Q6ZQN5 318 aa17.14■□□□□ 0.33
SUMO3-205ENST00000466861 HLA-DRB4P13762 266 aa17.13■□□□□ 0.33
SUMO3-205ENST00000466861 ZNF266Q14584 549 aa17.13■□□□□ 0.33
SUMO3-205ENST00000466861 ACTL10Q5JWF8 245 aa17.13■□□□□ 0.33
SUMO3-205ENST00000466861 INO80EQ8NBZ0 244 aaPredicted RBP17.13■□□□□ 0.33
SUMO3-205ENST00000466861 RNF183Q96D59 192 aa17.13■□□□□ 0.33
SUMO3-205ENST00000466861 LINC00052Q96N35 136 aa17.13■□□□□ 0.33
SUMO3-205ENST00000466861 OVOL2Q9BRP0 275 aa17.13■□□□□ 0.33
SUMO3-205ENST00000466861 RPRMQ9NS64 109 aa17.13■□□□□ 0.33
SUMO3-205ENST00000466861 HLA-DRB4X5D2U9 266 aa17.13■□□□□ 0.33
SUMO3-205ENST00000466861 KNCNA6PVL3 124 aa17.12■□□□□ 0.33
SUMO3-205ENST00000466861 H3BMM0 161 aa17.12■□□□□ 0.33
SUMO3-205ENST00000466861 Q5BKY6 102 aa17.12■□□□□ 0.33
SUMO3-205ENST00000466861 LCN15Q6UWW0 184 aa17.12■□□□□ 0.33
SUMO3-205ENST00000466861 SMIM3Q9BZL3 60 aa17.12■□□□□ 0.33
SUMO3-205ENST00000466861 SAV1Q9H4B6 383 aaPredicted RBP17.12■□□□□ 0.33
SUMO3-205ENST00000466861 CLEC5AQ9NY25 188 aa17.12■□□□□ 0.33
SUMO3-205ENST00000466861 TENM3Q9P273 2699 aa17.12■□□□□ 0.33
SUMO3-205ENST00000466861 SPRY2O43597 315 aa17.11■□□□□ 0.33
SUMO3-205ENST00000466861 NUTF2P61970 127 aaKnown RBP17.11■□□□□ 0.33
SUMO3-205ENST00000466861 GUK1Q16774 197 aa17.11■□□□□ 0.33
SUMO3-205ENST00000466861 SLC50A1Q9BRV3 221 aa17.11■□□□□ 0.33
SUMO3-205ENST00000466861 MRPL32Q9BYC8 188 aaKnown RBP17.11■□□□□ 0.33
SUMO3-205ENST00000466861 HRH4Q9H3N8 390 aa17.11■□□□□ 0.33
SUMO3-205ENST00000466861 TMEM14CQ9P0S9 112 aa17.11■□□□□ 0.33
SUMO3-205ENST00000466861 TNFSF18Q9UNG2 199 aa17.11■□□□□ 0.33
SUMO3-205ENST00000466861 MORN5Q5VZ52 161 aa17.1■□□□□ 0.33
SUMO3-205ENST00000466861 WFDC1Q9HC57 220 aa17.1■□□□□ 0.33
SUMO3-205ENST00000466861 TIMM9Q9Y5J7 89 aa17.1■□□□□ 0.33
SUMO3-205ENST00000466861 IGLC2P0DOY2 106 aa17.09■□□□□ 0.33
SUMO3-205ENST00000466861 EBLN2Q6P2I7 272 aa17.09■□□□□ 0.33
SUMO3-205ENST00000466861 LRRC20Q8TCA0 184 aa17.09■□□□□ 0.33
SUMO3-205ENST00000466861 RETNQ9HD89 108 aa17.09■□□□□ 0.33
SUMO3-205ENST00000466861 NBEAL2Q6ZNJ1 2754 aa17.09■□□□□ 0.33
SUMO3-205ENST00000466861 FXYD6-FXYD2A0A087WZ82 144 aa17.08■□□□□ 0.32
SUMO3-205ENST00000466861 TRAV8-2A0A0B4J237 113 aa17.08■□□□□ 0.32
SUMO3-205ENST00000466861 ZNF253O75346 499 aa17.08■□□□□ 0.32
SUMO3-205ENST00000466861 CA1P00915 261 aaPredicted RBP17.08■□□□□ 0.32
SUMO3-205ENST00000466861 DEFB135Q30KP9 77 aa17.08■□□□□ 0.32
SUMO3-205ENST00000466861 FAM78BQ5VT40 261 aa17.08■□□□□ 0.32
SUMO3-205ENST00000466861 C1QTNF4Q9BXJ3 329 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms