RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 ID1P41134 155 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 DEFB1P60022 68 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 PLP1P60201 277 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 DEFB135Q30KP9 77 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 Q5BKY6 102 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 PXDC1Q5TGL8 231 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 IGFL4Q6B9Z1 124 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 S100A7AQ86SG5 101 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 ZNF709Q8N972 641 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 TMEM37Q8WXS4 190 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 C16orf92Q96LL3 132 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 NPCDR1Q9BY65 106 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 DNAJC4Q9NNZ3 241 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 SLC39A9Q9NUM3 307 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
SHROOM3-202ENST00000466541 FXYD6-FXYD2A0A087WZ82 144 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 TRAV5A0A0B4J249 113 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 MPDU1O75352 247 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 IFNA5P01569 189 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 GIPP09681 153 aaPredicted RBP8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 PRB4P10163 310 aaPredicted RBP8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 OPCMLQ14982 345 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 MORN5Q5VZ52 161 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 OR1L4Q8NGR5 311 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 LRRC20Q8TCA0 184 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 SCGB1C1Q8TD33 95 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 ATP5SQ99766 215 aa8.88□□□□□ -0.99
SHROOM3-202ENST00000466541 ELOA3CA0A087WX78 387 aaPredicted RBP8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 H3BTX0 84 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 IGKV3-20P01619 116 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 RPL7P18124 248 aaKnown RBP8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 RPL29P47914 159 aaKnown RBP8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 PRR20EP86478 221 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 PRR20CP86479 221 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 PRR20DP86480 221 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 PRR20BP86481 221 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 PRR20AP86496 221 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 GCSAMLQ5JQS6 135 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 OR2T35Q8NGX2 323 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 C20orf173Q96LM9 149 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 GPR82Q96P67 336 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 CSTL1Q9H114 145 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 WFDC1Q9HC57 220 aa8.87□□□□□ -0.99
SHROOM3-202ENST00000466541 SMLR1H3BR10 107 aa8.86□□□□□ -0.99
SHROOM3-202ENST00000466541 CA1P00915 261 aaPredicted RBP8.86□□□□□ -0.99
SHROOM3-202ENST00000466541 LYL1P12980 280 aa8.86□□□□□ -0.99
SHROOM3-202ENST00000466541 PSMB3P49720 205 aa8.86□□□□□ -0.99
SHROOM3-202ENST00000466541 RNF182Q8N6D2 247 aa8.86□□□□□ -0.99
SHROOM3-202ENST00000466541 WWC2-AS2Q96NR7 200 aa8.86□□□□□ -0.99
SHROOM3-202ENST00000466541 PFDN5Q99471 154 aa8.86□□□□□ -0.99
SHROOM3-202ENST00000466541 WDR61Q9GZS3 305 aaKnown RBP8.86□□□□□ -0.99
SHROOM3-202ENST00000466541 RFNGQ9Y644 331 aa8.86□□□□□ -0.99
SHROOM3-202ENST00000466541 C17orf112F2Z3M2 114 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 F6UB75 175 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 ISLRO14498 428 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 SOCS3O14543 225 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 SPRY2O43597 315 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 MEOX2P50222 304 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 FXYD7P58549 80 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 GDF5OSQ5U4N7 250 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 BPIFA4PQ86YQ2 179 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 INO80EQ8NBZ0 244 aaPredicted RBP8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 OR4B1Q8NGF8 309 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 CHAC2Q8WUX2 184 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 C17orf77Q96MU5 243 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 OVOL2Q9BRP0 275 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 CLEC5AQ9NY25 188 aa8.85□□□□□ -0.99
SHROOM3-202ENST00000466541 KIR2DL5BA0A0G2JN68 375 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 KIR2DL5BA0A0G2JPC4 375 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 UBE2CO00762 179 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 ZNF705DP0CH99 300 aaPredicted RBP8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 ZNF705BP0CI00 300 aaPredicted RBP8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 HLA-DMBP28068 263 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 FFAR4Q5NUL3 377 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 FAM78BQ5VT40 261 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 SPATA31B1PQ5VZV4 182 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 EBLN2Q6P2I7 272 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 TRPT1Q86TN4 253 aaKnown RBP8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 KIR2DL5AQ8N109 375 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 ZNF738Q8NE65 137 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 KIR2DL5BQ8NHK3 375 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 ASB13Q8WXK3 278 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 SEPSECSQ9HD40 501 aaKnown RBP8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 KCNIP2Q9NS61 270 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 RPRMQ9NS64 109 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 RNF24Q9Y225 148 aa8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 HUWE1Q7Z6Z7 4374 aaKnown RBP8.84□□□□□ -0.99
SHROOM3-202ENST00000466541 TRAV8-2A0A0B4J237 113 aa8.83□□□□□ -1
SHROOM3-202ENST00000466541 H3BMM0 161 aa8.83□□□□□ -1
SHROOM3-202ENST00000466541 Q6ZWC4 215 aa8.83□□□□□ -1
SHROOM3-202ENST00000466541 MIR17HGQ75NE6 70 aa8.83□□□□□ -1
SHROOM3-202ENST00000466541 GATAD1Q8WUU5 269 aa8.83□□□□□ -1
SHROOM3-202ENST00000466541 H3BQ15 152 aa8.82□□□□□ -1
SHROOM3-202ENST00000466541 EIF3GO75821 320 aaKnown RBP eCLIP8.82□□□□□ -1
SHROOM3-202ENST00000466541 PYYP10082 97 aa8.82□□□□□ -1
SHROOM3-202ENST00000466541 HLA-DRB4P13762 266 aa8.82□□□□□ -1
SHROOM3-202ENST00000466541 SAMD13Q5VXD3 122 aa8.82□□□□□ -1
SHROOM3-202ENST00000466541 HSD17B11Q8NBQ5 300 aa8.82□□□□□ -1
SHROOM3-202ENST00000466541 BLNKQ8WV28 456 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms