RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 COX7A2P2O60397 106 aa18.8■□□□□ 0.6
PAXBP1-206ENST00000464256 AP2S1P53680 142 aaPredicted RBP18.8■□□□□ 0.6
PAXBP1-206ENST00000464256 NRN1Q9NPD7 142 aa18.8■□□□□ 0.6
PAXBP1-206ENST00000464256 A8MZ25 164 aa18.79■□□□□ 0.6
PAXBP1-206ENST00000464256 SNRPCP09234 159 aaKnown RBP18.79■□□□□ 0.6
PAXBP1-206ENST00000464256 NUP62P37198 522 aaPredicted RBP18.79■□□□□ 0.6
PAXBP1-206ENST00000464256 DEFB131AP59861 70 aa18.79■□□□□ 0.6
PAXBP1-206ENST00000464256 OR11H4Q8NGC9 324 aa18.79■□□□□ 0.6
PAXBP1-206ENST00000464256 TRAV5A0A0B4J249 113 aa18.79■□□□□ 0.6
PAXBP1-206ENST00000464256 MPDU1O75352 247 aa18.79■□□□□ 0.6
PAXBP1-206ENST00000464256 PFDN2Q9UHV9 154 aa18.79■□□□□ 0.6
PAXBP1-206ENST00000464256 STAB2Q8WWQ8 2551 aa18.78■□□□□ 0.6
PAXBP1-206ENST00000464256 DEFB1P60022 68 aa18.78■□□□□ 0.6
PAXBP1-206ENST00000464256 C10orf113Q5VZT2 155 aa18.78■□□□□ 0.6
PAXBP1-206ENST00000464256 LINC00322Q6ZN03 302 aaPredicted RBP18.78■□□□□ 0.6
PAXBP1-206ENST00000464256 Q6ZRG5 221 aa18.78■□□□□ 0.6
PAXBP1-206ENST00000464256 TRAV2A0A0B4J234 112 aa18.77■□□□□ 0.6
PAXBP1-206ENST00000464256 ARPC5O15511 151 aa18.77■□□□□ 0.6
PAXBP1-206ENST00000464256 DNAJC4Q9NNZ3 241 aa18.77■□□□□ 0.6
PAXBP1-206ENST00000464256 SOCS3O14543 225 aa18.76■□□□□ 0.59
PAXBP1-206ENST00000464256 MRPS12O15235 138 aaKnown RBP18.76■□□□□ 0.59
PAXBP1-206ENST00000464256 PXDC1Q5TGL8 231 aa18.76■□□□□ 0.59
PAXBP1-206ENST00000464256 SPATA31B1PQ5VZV4 182 aa18.76■□□□□ 0.59
PAXBP1-206ENST00000464256 ST6GAL2Q96JF0 529 aa18.76■□□□□ 0.59
PAXBP1-206ENST00000464256 IGFL4Q6B9Z1 124 aa18.76■□□□□ 0.59
PAXBP1-206ENST00000464256 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.76■□□□□ 0.59
PAXBP1-206ENST00000464256 INO80EQ8NBZ0 244 aaPredicted RBP18.76■□□□□ 0.59
PAXBP1-206ENST00000464256 IFNA5P01569 189 aa18.75■□□□□ 0.59
PAXBP1-206ENST00000464256 HAGHQ16775 308 aa18.75■□□□□ 0.59
PAXBP1-206ENST00000464256 PSMG4Q5JS54 123 aa18.75■□□□□ 0.59
PAXBP1-206ENST00000464256 FAM110AQ9BQ89 295 aa18.75■□□□□ 0.59
PAXBP1-206ENST00000464256 ELOA3CA0A087WX78 387 aaPredicted RBP18.74■□□□□ 0.59
PAXBP1-206ENST00000464256 H3BTX0 84 aa18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 EIF3GO75821 320 aaKnown RBP eCLIP18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 PRB4P10163 310 aaPredicted RBP18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 RPL35AP18077 110 aaKnown RBP18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 GALR1P47211 349 aa18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 ZNF709Q8N972 641 aa18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 SCGB1C1Q8TD33 95 aa18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 KNCNA6PVL3 124 aa18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 HSD17B11Q8NBQ5 300 aa18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 OR1L4Q8NGR5 311 aa18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 C20orf173Q96LM9 149 aa18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 SEPSECSQ9HD40 501 aaKnown RBP18.73■□□□□ 0.59
PAXBP1-206ENST00000464256 FFAR4Q5NUL3 377 aa18.72■□□□□ 0.59
PAXBP1-206ENST00000464256 RPL7L1Q6DKI1 246 aaKnown RBP18.72■□□□□ 0.59
PAXBP1-206ENST00000464256 PFDN5Q99471 154 aa18.72■□□□□ 0.59
PAXBP1-206ENST00000464256 PARD6GQ9BYG4 376 aaPredicted RBP18.72■□□□□ 0.59
PAXBP1-206ENST00000464256 CD300CQ08708 224 aa18.71■□□□□ 0.59
PAXBP1-206ENST00000464256 MIR17HGQ75NE6 70 aa18.71■□□□□ 0.59
PAXBP1-206ENST00000464256 RETNQ9HD89 108 aa18.71■□□□□ 0.59
PAXBP1-206ENST00000464256 TRAV8-2A0A0B4J237 113 aa18.7■□□□□ 0.58
PAXBP1-206ENST00000464256 RPL7P18124 248 aaKnown RBP18.7■□□□□ 0.58
PAXBP1-206ENST00000464256 FAM78BQ5VT40 261 aa18.7■□□□□ 0.58
PAXBP1-206ENST00000464256 LINC00052Q96N35 136 aa18.7■□□□□ 0.58
PAXBP1-206ENST00000464256 GPR82Q96P67 336 aa18.7■□□□□ 0.58
PAXBP1-206ENST00000464256 MFFQ9GZY8 342 aa18.7■□□□□ 0.58
PAXBP1-206ENST00000464256 SH3BGRL3Q9H299 93 aa18.7■□□□□ 0.58
PAXBP1-206ENST00000464256 C17orf112F2Z3M2 114 aa18.69■□□□□ 0.58
PAXBP1-206ENST00000464256 HLA-DMBP28068 263 aa18.69■□□□□ 0.58
PAXBP1-206ENST00000464256 GDF5OSQ5U4N7 250 aa18.69■□□□□ 0.58
PAXBP1-206ENST00000464256 RNF182Q8N6D2 247 aa18.69■□□□□ 0.58
PAXBP1-206ENST00000464256 GATAD1Q8WUU5 269 aa18.69■□□□□ 0.58
PAXBP1-206ENST00000464256 LOC102724200A0A096LPH7 203 aaPredicted RBP18.69■□□□□ 0.58
PAXBP1-206ENST00000464256 H3BQ15 152 aa18.69■□□□□ 0.58
PAXBP1-206ENST00000464256 ATF4P18848 351 aaPredicted RBP18.69■□□□□ 0.58
PAXBP1-206ENST00000464256 ATP6V0CP27449 155 aa18.68■□□□□ 0.58
PAXBP1-206ENST00000464256 S100A7P31151 101 aa18.68■□□□□ 0.58
PAXBP1-206ENST00000464256 ZNF266Q14584 549 aa18.68■□□□□ 0.58
PAXBP1-206ENST00000464256 C16orf92Q96LL3 132 aa18.68■□□□□ 0.58
PAXBP1-206ENST00000464256 SLC17A3O00476 420 aa18.67■□□□□ 0.58
PAXBP1-206ENST00000464256 PYYP10082 97 aa18.67■□□□□ 0.58
PAXBP1-206ENST00000464256 CXCL2P19875 107 aa18.67■□□□□ 0.58
PAXBP1-206ENST00000464256 SNRPD3P62318 126 aaKnown RBP18.67■□□□□ 0.58
PAXBP1-206ENST00000464256 ACTL10Q5JWF8 245 aa18.67■□□□□ 0.58
PAXBP1-206ENST00000464256 FAM167A-AS1Q96KT0 104 aa18.67■□□□□ 0.58
PAXBP1-206ENST00000464256 SLC25A2Q9BXI2 301 aa18.67■□□□□ 0.58
PAXBP1-206ENST00000464256 CYTL1Q9NRR1 136 aa18.67■□□□□ 0.58
PAXBP1-206ENST00000464256 F6UB75 175 aa18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 IGLC2P0DOY2 106 aa18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 CMC4P56277 68 aaPredicted RBP18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 RAB2AP61019 212 aa18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 BPIFA4PQ86YQ2 179 aa18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 TM2D3Q9BRN9 247 aa18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 KCNIP2Q9NS61 270 aa18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 A0A087X0K7 114 aa18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 PSMB3P49720 205 aa18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 S100A7AQ86SG5 101 aa18.66■□□□□ 0.58
PAXBP1-206ENST00000464256 ISLRO14498 428 aa18.65■□□□□ 0.58
PAXBP1-206ENST00000464256 DNAH7Q8WXX0 4024 aa18.64■□□□□ 0.58
PAXBP1-206ENST00000464256 HMSDA8MTL9 139 aa18.64■□□□□ 0.57
PAXBP1-206ENST00000464256 ZNF586Q9NXT0 402 aa18.64■□□□□ 0.57
PAXBP1-206ENST00000464256 MEOX2P50222 304 aa18.63■□□□□ 0.57
PAXBP1-206ENST00000464256 TCTE3Q8IZS6 198 aa18.63■□□□□ 0.57
PAXBP1-206ENST00000464256 KCNRGQ8N5I3 272 aa18.63■□□□□ 0.57
PAXBP1-206ENST00000464256 FUT9Q9Y231 359 aa18.63■□□□□ 0.57
PAXBP1-206ENST00000464256 TIMM9Q9Y5J7 89 aa18.63■□□□□ 0.57
PAXBP1-206ENST00000464256 ID1P41134 155 aa18.63■□□□□ 0.57
PAXBP1-206ENST00000464256 TRPT1Q86TN4 253 aaKnown RBP18.63■□□□□ 0.57
PAXBP1-206ENST00000464256 ZNF503Q96F45 646 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms