RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SLC25A22Q9H936 323 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 MBD2Q9UBB5 411 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 KMT2CQ8NEZ4 4911 aaKnown RBP12.99□□□□□ -0.33
VPS52-214ENST00000463486 KNCNA6PVL3 124 aa12.98□□□□□ -0.33
VPS52-214ENST00000463486 UBE2CO00762 179 aa12.98□□□□□ -0.33
VPS52-214ENST00000463486 APOC4P55056 127 aa12.98□□□□□ -0.33
VPS52-214ENST00000463486 RAP2BP61225 183 aa12.98□□□□□ -0.33
VPS52-214ENST00000463486 Q5BKY6 102 aa12.98□□□□□ -0.33
VPS52-214ENST00000463486 MORN5Q5VZ52 161 aa12.98□□□□□ -0.33
VPS52-214ENST00000463486 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.98□□□□□ -0.33
VPS52-214ENST00000463486 TRPT1Q86TN4 253 aaKnown RBP12.98□□□□□ -0.33
VPS52-214ENST00000463486 RSG1Q9BU20 258 aa12.98□□□□□ -0.33
VPS52-214ENST00000463486 RAB31Q13636 194 aa12.97□□□□□ -0.33
VPS52-214ENST00000463486 GPR82Q96P67 336 aa12.97□□□□□ -0.33
VPS52-214ENST00000463486 CSTL1Q9H114 145 aa12.97□□□□□ -0.33
VPS52-214ENST00000463486 HSPB11Q9Y547 144 aa12.97□□□□□ -0.33
VPS52-214ENST00000463486 STARD9Q9P2P6 4700 aa12.97□□□□□ -0.33
VPS52-214ENST00000463486 DYNC2H1Q8NCM8 4307 aaKnown RBP12.96□□□□□ -0.33
VPS52-214ENST00000463486 ISLRO14498 428 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 PET100P0DJ07 73 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 FGF7P21781 194 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 RPL12P30050 165 aaKnown RBP12.96□□□□□ -0.33
VPS52-214ENST00000463486 GALR1P47211 349 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 PSMB3P49720 205 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 DEFB1P60022 68 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 SNRPD3P62318 126 aaKnown RBP12.96□□□□□ -0.33
VPS52-214ENST00000463486 CLINT1Q14677 625 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 LINC00305Q7Z4B0 112 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 THAP6Q8TBB0 222 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 RNF183Q96D59 192 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 C20orf173Q96LM9 149 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 NPCDR1Q9BY65 106 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 DNAJC4Q9NNZ3 241 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 SLC39A9Q9NUM3 307 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 TP53TG1Q9Y2A0 90 aa12.96□□□□□ -0.33
VPS52-214ENST00000463486 ELOA3CA0A087WX78 387 aaPredicted RBP12.95□□□□□ -0.34
VPS52-214ENST00000463486 TRAV8-2A0A0B4J237 113 aa12.95□□□□□ -0.34
VPS52-214ENST00000463486 MPDU1O75352 247 aa12.95□□□□□ -0.34
VPS52-214ENST00000463486 S100A7P31151 101 aa12.95□□□□□ -0.34
VPS52-214ENST00000463486 DEFB135Q30KP9 77 aa12.95□□□□□ -0.34
VPS52-214ENST00000463486 ACTL10Q5JWF8 245 aa12.95□□□□□ -0.34
VPS52-214ENST00000463486 GDF5OSQ5U4N7 250 aa12.95□□□□□ -0.34
VPS52-214ENST00000463486 WDR61Q9GZS3 305 aaKnown RBP12.95□□□□□ -0.34
VPS52-214ENST00000463486 WFDC1Q9HC57 220 aa12.95□□□□□ -0.34
VPS52-214ENST00000463486 A0A087X0K7 114 aa12.94□□□□□ -0.34
VPS52-214ENST00000463486 H3BMM0 161 aa12.94□□□□□ -0.34
VPS52-214ENST00000463486 COX7A2P2O60397 106 aa12.94□□□□□ -0.34
VPS52-214ENST00000463486 GIPP09681 153 aaPredicted RBP12.94□□□□□ -0.34
VPS52-214ENST00000463486 RPL7P18124 248 aaKnown RBP12.94□□□□□ -0.34
VPS52-214ENST00000463486 MEOX2P50222 304 aa12.94□□□□□ -0.34
VPS52-214ENST00000463486 B2MP61769 119 aa12.94□□□□□ -0.34
VPS52-214ENST00000463486 C10orf113Q5VZT2 155 aa12.94□□□□□ -0.34
VPS52-214ENST00000463486 STHQ8IWL8 128 aa12.94□□□□□ -0.34
VPS52-214ENST00000463486 PXMP4Q9Y6I8 212 aa12.94□□□□□ -0.34
VPS52-214ENST00000463486 TRAV5A0A0B4J249 113 aa12.93□□□□□ -0.34
VPS52-214ENST00000463486 G3V3Q6 166 aa12.93□□□□□ -0.34
VPS52-214ENST00000463486 SPRY2O43597 315 aa12.93□□□□□ -0.34
VPS52-214ENST00000463486 GCSAMLQ5JQS6 135 aa12.93□□□□□ -0.34
VPS52-214ENST00000463486 Q6ZRG5 221 aa12.93□□□□□ -0.34
VPS52-214ENST00000463486 ATP5SQ99766 215 aa12.93□□□□□ -0.34
VPS52-214ENST00000463486 HLA-DRB4P13762 266 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 C4BPBP20851 252 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 ID1P41134 155 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 IGFL4Q6B9Z1 124 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 S100A7AQ86SG5 101 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 ASB13Q8WXK3 278 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 LINC00052Q96N35 136 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 SAV1Q9H4B6 383 aaPredicted RBP12.92□□□□□ -0.34
VPS52-214ENST00000463486 HLA-DRB4X5D2U9 266 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 TENM2Q9NT68 2774 aa12.92□□□□□ -0.34
VPS52-214ENST00000463486 FOXI2Q6ZQN5 318 aa12.91□□□□□ -0.34
VPS52-214ENST00000463486 CSNK1G2-AS1Q8NCQ2 148 aa12.91□□□□□ -0.34
VPS52-214ENST00000463486 OR1L4Q8NGR5 311 aa12.91□□□□□ -0.34
VPS52-214ENST00000463486 GATAD1Q8WUU5 269 aa12.91□□□□□ -0.34
VPS52-214ENST00000463486 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
VPS52-214ENST00000463486 SMIM3Q9BZL3 60 aa12.91□□□□□ -0.34
VPS52-214ENST00000463486 F6UB75 175 aa12.9□□□□□ -0.34
VPS52-214ENST00000463486 H3BQ15 152 aa12.9□□□□□ -0.34
VPS52-214ENST00000463486 CA1P00915 261 aaPredicted RBP12.9□□□□□ -0.34
VPS52-214ENST00000463486 IGLC2P0DOY2 106 aa12.9□□□□□ -0.34
VPS52-214ENST00000463486 SPP1P10451 314 aa12.9□□□□□ -0.34
VPS52-214ENST00000463486 CLUHP3Q96NS8 147 aa12.9□□□□□ -0.34
VPS52-214ENST00000463486 AQP10Q96PS8 301 aa12.9□□□□□ -0.34
VPS52-214ENST00000463486 PFDN5Q99471 154 aa12.9□□□□□ -0.34
VPS52-214ENST00000463486 PLECQ15149 4684 aaKnown RBP12.89□□□□□ -0.35
VPS52-214ENST00000463486 A0A0J9YX75 114 aa12.89□□□□□ -0.35
VPS52-214ENST00000463486 A8MTW9 85 aa12.89□□□□□ -0.35
VPS52-214ENST00000463486 ATF4P18848 351 aaPredicted RBP12.89□□□□□ -0.35
VPS52-214ENST00000463486 HLA-DMBP28068 263 aa12.89□□□□□ -0.35
VPS52-214ENST00000463486 MORN3Q6PF18 240 aaPredicted RBP12.89□□□□□ -0.35
VPS52-214ENST00000463486 BPIFA4PQ86YQ2 179 aa12.89□□□□□ -0.35
VPS52-214ENST00000463486 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
VPS52-214ENST00000463486 MUC7Q8TAX7 377 aa12.89□□□□□ -0.35
VPS52-214ENST00000463486 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
VPS52-214ENST00000463486 PARD6GQ9BYG4 376 aaPredicted RBP12.89□□□□□ -0.35
VPS52-214ENST00000463486 RNF24Q9Y225 148 aa12.89□□□□□ -0.35
VPS52-214ENST00000463486 RFNGQ9Y644 331 aa12.89□□□□□ -0.35
VPS52-214ENST00000463486 SNRPCP09234 159 aaKnown RBP12.88□□□□□ -0.35
VPS52-214ENST00000463486 FGL1Q08830 312 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms