RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 WFDC3Q8IUB2 231 aa10.15□□□□□ -0.78
SEMA3D-203ENST00000463315 OR11H7Q8NGC8 314 aa10.15□□□□□ -0.78
SEMA3D-203ENST00000463315 OR5C1Q8NGR4 320 aa10.15□□□□□ -0.78
SEMA3D-203ENST00000463315 THAP6Q8TBB0 222 aa10.15□□□□□ -0.78
SEMA3D-203ENST00000463315 ARL6Q9H0F7 186 aa10.15□□□□□ -0.78
SEMA3D-203ENST00000463315 ISLRO14498 428 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 OR5G3P0C626 314 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 RPL12P30050 165 aaKnown RBP10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 ID1P41134 155 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 PSMB3P49720 205 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 DEFB131AP59861 70 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 APRG1Q8IVJ8 170 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 OR1L4Q8NGR5 311 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 RCHY1Q96PM5 261 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 PFDN5Q99471 154 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 ARV1Q9H2C2 271 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 KCNIP2Q9NS61 270 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 TP53TG1Q9Y2A0 90 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 TENM3Q9P273 2699 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 DNAH9Q9NYC9 4486 aa10.14□□□□□ -0.79
SEMA3D-203ENST00000463315 UBE2L5PA0A1B0GUS4 154 aa10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 OPCMLQ14982 345 aa10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 TMEM41BQ5BJD5 291 aa10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 PATE2Q6UY27 113 aa10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 FAM24BQ8N5W8 94 aa10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 PARD6GQ9BYG4 376 aaPredicted RBP10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 SLC25A22Q9H936 323 aa10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 DNAJC4Q9NNZ3 241 aa10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 MBD2Q9UBB5 411 aa10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 HSPB11Q9Y547 144 aa10.13□□□□□ -0.79
SEMA3D-203ENST00000463315 SOCS3O14543 225 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 COX7A2P2O60397 106 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 ZNF688P0C7X2 276 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 FGF7P21781 194 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 C10orf113Q5VZT2 155 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 SPATA31B1PQ5VZV4 182 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 GATAD1Q8WUU5 269 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 TMEM37Q8WXS4 190 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 WWC2-AS2Q96NR7 200 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 ATP5SQ99766 215 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 NPCDR1Q9BY65 106 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 SLC25A32Q9H2D1 315 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 SLC39A9Q9NUM3 307 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 DOK5Q9P104 306 aa10.12□□□□□ -0.79
SEMA3D-203ENST00000463315 A0A087X0K7 114 aa10.11□□□□□ -0.79
SEMA3D-203ENST00000463315 B2MP61769 119 aa10.11□□□□□ -0.79
SEMA3D-203ENST00000463315 LINC00305Q7Z4B0 112 aa10.11□□□□□ -0.79
SEMA3D-203ENST00000463315 BPIFA4PQ86YQ2 179 aa10.11□□□□□ -0.79
SEMA3D-203ENST00000463315 STHQ8IWL8 128 aa10.11□□□□□ -0.79
SEMA3D-203ENST00000463315 CLUHP3Q96NS8 147 aa10.11□□□□□ -0.79
SEMA3D-203ENST00000463315 SCRT1Q9BWW7 348 aa10.11□□□□□ -0.79
SEMA3D-203ENST00000463315 WDR61Q9GZS3 305 aaKnown RBP10.11□□□□□ -0.79
SEMA3D-203ENST00000463315 C17orf112F2Z3M2 114 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 IFNA5P01569 189 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 SPP1P10451 314 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 CXCL2P19875 107 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 CLINT1Q14677 625 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 PSMG4Q5JS54 123 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 MIC13Q5XKP0 118 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 MORN3Q6PF18 240 aaPredicted RBP10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 TRPT1Q86TN4 253 aaKnown RBP10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 ZNF709Q8N972 641 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 AQP10Q96PS8 301 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 UHRF2Q96PU4 802 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 RSG1Q9BU20 258 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 PXMP4Q9Y6I8 212 aa10.1□□□□□ -0.79
SEMA3D-203ENST00000463315 ATF4P18848 351 aaPredicted RBP10.09□□□□□ -0.79
SEMA3D-203ENST00000463315 ZNF124Q15973 351 aa10.09□□□□□ -0.79
SEMA3D-203ENST00000463315 LEMD1Q68G75 181 aa10.09□□□□□ -0.79
SEMA3D-203ENST00000463315 C16orf92Q96LL3 132 aa10.09□□□□□ -0.79
SEMA3D-203ENST00000463315 C17orf77Q96MU5 243 aa10.09□□□□□ -0.79
SEMA3D-203ENST00000463315 CLEC5AQ9NY25 188 aa10.09□□□□□ -0.79
SEMA3D-203ENST00000463315 MRPS12O15235 138 aaKnown RBP10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 HLA-DRB4P13762 266 aa10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 RPL35AP18077 110 aaKnown RBP10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 NUTF2P61970 127 aaKnown RBP10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 GUK1Q16774 197 aa10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 FOXI2Q6ZQN5 318 aa10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 SCGB1C1Q8TD33 95 aa10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 RNF183Q96D59 192 aa10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 OVOL2Q9BRP0 275 aa10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 RPRMQ9NS64 109 aa10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 HLA-DRB4X5D2U9 266 aa10.08□□□□□ -0.8
SEMA3D-203ENST00000463315 H3BMM0 161 aa10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 SPRY2O43597 315 aa10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 ZNF266Q14584 549 aa10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 ACTL10Q5JWF8 245 aa10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 LCN15Q6UWW0 184 aa10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 INO80EQ8NBZ0 244 aaPredicted RBP10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 OR2T35Q8NGX2 323 aa10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 SLC50A1Q9BRV3 221 aa10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 HRH4Q9H3N8 390 aa10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 SAV1Q9H4B6 383 aaPredicted RBP10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
SEMA3D-203ENST00000463315 ZNF253O75346 499 aa10.06□□□□□ -0.8
SEMA3D-203ENST00000463315 LINC00052Q96N35 136 aa10.06□□□□□ -0.8
SEMA3D-203ENST00000463315 C1QTNF4Q9BXJ3 329 aa10.06□□□□□ -0.8
SEMA3D-203ENST00000463315 MRPL32Q9BYC8 188 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms