RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 H3BRN7 92 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 SOCS3O14543 225 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 GIG44P09565 113 aaPredicted RBP9.53□□□□□ -0.88
HDAC1-203ENST00000463172 TCTAP57738 103 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 S100A10P60903 97 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 HBG1P69891 147 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 HBG2P69892 147 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 STX12Q86Y82 276 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 Q8NAQ8 132 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 LRRC20Q8TCA0 184 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 SHANK2-AS3Q9BTD1 123 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 ARL6Q9H0F7 186 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 XCL2Q9UBD3 114 aa9.53□□□□□ -0.88
HDAC1-203ENST00000463172 SMIM9A6NGZ8 99 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 A6NHS1 94 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 DEFB4AO15263 64 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 PRAF2O60831 178 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 UPK1BO75841 260 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 DUSP14O95147 198 aaKnown RBP9.52□□□□□ -0.89
HDAC1-203ENST00000463172 LY6G6CO95867 125 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 DEFA1P59665 94 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 DEFA3P59666 94 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 NANOS2P60321 138 aaKnown RBP9.52□□□□□ -0.89
HDAC1-203ENST00000463172 PSG9Q00887 426 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 FGL1Q08830 312 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 SLC38A11Q08AI6 406 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 CSNK1G2-AS1Q8NCQ2 148 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 C2CD4CQ8TF44 421 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 LINC00476Q8WZB0 136 aa9.52□□□□□ -0.89
HDAC1-203ENST00000463172 ELOA3CA0A087WX78 387 aaPredicted RBP9.51□□□□□ -0.89
HDAC1-203ENST00000463172 TMEM189A5PLL7 270 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 AGPAT2O15120 278 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 COX7A2P2O60397 106 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 CCNKO75909 580 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 IGKV3-20P01619 116 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 AMBPP02760 352 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 RLN2P04090 185 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 TMEM182Q6ZP80 229 aaPredicted RBP9.51□□□□□ -0.89
HDAC1-203ENST00000463172 Q6ZRG5 221 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 SCRT1Q9BWW7 348 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 ARV1Q9H2C2 271 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 BATF3Q9NR55 127 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 GOLT1BQ9Y3E0 138 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 X6R8D5 127 aa9.51□□□□□ -0.89
HDAC1-203ENST00000463172 A0A0J9YX75 114 aa9.5□□□□□ -0.89
HDAC1-203ENST00000463172 TEX48A0A1B0GUV7 120 aa9.5□□□□□ -0.89
HDAC1-203ENST00000463172 S100A11P31949 105 aa9.5□□□□□ -0.89
HDAC1-203ENST00000463172 SULT1A1P50225 295 aa9.5□□□□□ -0.89
HDAC1-203ENST00000463172 FAM78BQ5VT40 261 aa9.5□□□□□ -0.89
HDAC1-203ENST00000463172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.5□□□□□ -0.89
HDAC1-203ENST00000463172 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
HDAC1-203ENST00000463172 NEU1Q99519 415 aa9.5□□□□□ -0.89
HDAC1-203ENST00000463172 LYRM2Q9NU23 88 aaPredicted RBP9.5□□□□□ -0.89
HDAC1-203ENST00000463172 UQCC1Q9NVA1 299 aa9.5□□□□□ -0.89
HDAC1-203ENST00000463172 TRAV10A0A0B4J240 114 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 CST7O76096 145 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 CXCL2P19875 107 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 CAMLGP49069 296 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 CYCSP99999 105 aaKnown RBP9.49□□□□□ -0.89
HDAC1-203ENST00000463172 ATP6V1FQ16864 119 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 GDF5OSQ5U4N7 250 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 LINC00305Q7Z4B0 112 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 BPIFA4PQ86YQ2 179 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 OR1L4Q8NGR5 311 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 UHRF2Q96PU4 802 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 PFDN5Q99471 154 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 PPP1R14DQ9NXH3 145 aa9.49□□□□□ -0.89
HDAC1-203ENST00000463172 ALMS1Q8TCU4 4167 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 IGHV3OR16-12A0A075B7B8 117 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 A0A087X0K7 114 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 FAM24AA6NFZ4 105 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 RBMY1A1P0DJD3 496 aaKnown RBP9.48□□□□□ -0.89
HDAC1-203ENST00000463172 RBMY1CP0DJD4 496 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 HLA-DMBP28068 263 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 ARL16Q0P5N6 197 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 RAB32Q13637 225 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 RBMY1FQ15415 496 aaKnown RBP9.48□□□□□ -0.89
HDAC1-203ENST00000463172 C10orf113Q5VZT2 155 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 LCN15Q6UWW0 184 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 ZNF705AQ6ZN79 300 aaPredicted RBP9.48□□□□□ -0.89
HDAC1-203ENST00000463172 TMEM208Q9BTX3 173 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 SLC25A31Q9H0C2 315 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 RFNGQ9Y644 331 aa9.48□□□□□ -0.89
HDAC1-203ENST00000463172 F6UB75 175 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 INMT-MINDY4F8WBC2 141 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 MPDU1O75352 247 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 HBE1P02100 147 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 FXYD7P58549 80 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 B2MP61769 119 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 BAXQ07812 192 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 NRARPQ7Z6K4 114 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 TMEM252Q8N6L7 170 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 MGST2Q99735 147 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 SLC50A1Q9BRV3 221 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 DNAJC4Q9NNZ3 241 aa9.47□□□□□ -0.89
HDAC1-203ENST00000463172 DNAH1Q9P2D7 4330 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 UBE2L5PA0A1B0GUS4 154 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 ZNF705FA8MVS1 300 aaPredicted RBP9.46□□□□□ -0.9
HDAC1-203ENST00000463172 E5RGE8 158 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 INSP01308 110 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms