RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 FANCMQ8IYD8 2048 aa0.3□□□□□ -2.36
KDM3A-208ENST00000463013 ARAP2Q8WZ64 1704 aa0.3□□□□□ -2.36
KDM3A-208ENST00000463013 BCL9O00512 1426 aa0.3□□□□□ -2.36
KDM3A-208ENST00000463013 TNS3Q68CZ2 1445 aa0.3□□□□□ -2.36
KDM3A-208ENST00000463013 FAT2Q9NYQ8 4349 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 DNAH7Q8WXX0 4024 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 MUC22E2RYF6 1773 aaPredicted RBP0.29□□□□□ -2.36
KDM3A-208ENST00000463013 VPS13DQ5THJ4 4388 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 MBD5Q9P267 1494 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 AFDNP55196 1824 aaKnown RBP0.29□□□□□ -2.36
KDM3A-208ENST00000463013 MED13LQ71F56 2210 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 ZFC3H1O60293 1989 aaKnown RBP0.29□□□□□ -2.36
KDM3A-208ENST00000463013 EML6Q6ZMW3 1958 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 LRP1Q07954 4544 aaKnown RBP0.29□□□□□ -2.36
KDM3A-208ENST00000463013 GOLGA8KD6RF30 607 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 PFDN6O15212 129 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 OR2T1O43869 369 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 HYPMO75409 117 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 UBE2G2P60604 165 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 CCL20P78556 96 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 Q8N6K4 173 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 Q8N814 137 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 OR4D11Q8NGI4 311 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 RASSF5Q8WWW0 418 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 CMTM5Q96DZ9 223 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 DIRAS2Q96HU8 199 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 SLC50A1Q9BRV3 221 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 IMP3Q9NV31 184 aaKnown RBP0.29□□□□□ -2.36
KDM3A-208ENST00000463013 FAT3Q8TDW7 4589 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 MGAM2Q2M2H8 2515 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 DNAH11Q96DT5 4516 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 A0A1B0GUL6 1792 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 LOC285556D6RIA3 1793 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 PPLO60437 1756 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 ZFYVE9O95405 1425 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 NSD3Q9BZ95 1437 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 PRXQ9BXM0 1461 aa0.29□□□□□ -2.36
KDM3A-208ENST00000463013 ATG2AQ2TAZ0 1938 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 PKHD1P08F94 4074 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 DUOX1Q9NRD9 1551 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 NRXN2Q9P2S2 1712 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 IGKV1D-42A0A075B6H8 117 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 HTR1AP08908 422 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 FKBP2P26885 142 aaKnown RBP0.28□□□□□ -2.36
KDM3A-208ENST00000463013 RPL12P30050 165 aaKnown RBP0.28□□□□□ -2.36
KDM3A-208ENST00000463013 Q6ZQT0 140 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 PLEKHG7Q6ZR37 379 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 DEFB128Q7Z7B8 93 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 DEFB125Q8N687 156 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 ZNF418Q8TF45 676 aaPredicted RBP0.28□□□□□ -2.36
KDM3A-208ENST00000463013 CNBD2Q96M20 576 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 TRIM4Q9C037 500 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 FAM96AQ9H5X1 160 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 CISHQ9NSE2 258 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 CKLFQ9UBR5 152 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 PTPRQQ9UMZ3 2332 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 MGAMO43451 1857 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 ANKRD31Q8N7Z5 1873 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 ARHGEF10O15013 1369 aa0.28□□□□□ -2.36
KDM3A-208ENST00000463013 TNRC6AQ8NDV7 1962 aaKnown RBP0.28□□□□□ -2.36
KDM3A-208ENST00000463013 RIC1Q4ADV7 1423 aa0.28□□□□□ -2.37
KDM3A-208ENST00000463013 CASKIN1Q8WXD9 1431 aa0.28□□□□□ -2.37
KDM3A-208ENST00000463013 USH2AO75445 5202 aa0.28□□□□□ -2.37
KDM3A-208ENST00000463013 IQGAP3Q86VI3 1631 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 DNAH17Q9UFH2 4485 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 SIP14410 1827 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 PATJQ8NI35 1801 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 MUC12Q9UKN1 5478 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 DNAH2Q9P225 4427 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 TRBV20OR9-2A0A075B6H5 130 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 C2orf70A6NJV1 201 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 GOLGA6L19H0YKK7 550 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 M0R2N4 97 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 CTSDP07339 412 aaPredicted RBP0.27□□□□□ -2.37
KDM3A-208ENST00000463013 C8orf88P0DMB2 117 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 PDE6HQ13956 83 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 C1orf195Q5TG92 126 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 GDF5OSQ5U4N7 250 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 PHF13Q86YI8 300 aaPredicted RBP0.27□□□□□ -2.37
KDM3A-208ENST00000463013 LINC00311Q8N616 119 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 PIK3R4Q99570 1358 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 CSPG4Q6UVK1 2322 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 PKD1P98161 4303 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 ACANP16112 2415 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 DNAH6Q9C0G6 4158 aa0.27□□□□□ -2.37
KDM3A-208ENST00000463013 SCN10AQ9Y5Y9 1956 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 APC2O95996 2303 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 CACNA1EQ15878 2313 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 NBASA2RRP1 2371 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 SPTBN1Q01082 2364 aaKnown RBP0.26□□□□□ -2.37
KDM3A-208ENST00000463013 DNAH3Q8TD57 4116 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 ALMS1Q8TCU4 4167 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 LPAP08519 4548 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 A0A0J9YY10 115 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 A0A1B0GX78 115 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 FAM25EA8MYX2 175 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 OR1I1O60431 355 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 ASAH2BP0C7U1 165 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 MARCKSL1P49006 195 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms