RNA–Protein interactions for RNA: ENST00000462817.5

LIMS1-211, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-211ENST00000462817 CSNK1G2-AS1Q8NCQ2 148 aa11.26□□□□□ -0.61
LIMS1-211ENST00000462817 LRRC20Q8TCA0 184 aa11.26□□□□□ -0.61
LIMS1-211ENST00000462817 C2orf50Q96LR7 162 aa11.26□□□□□ -0.61
LIMS1-211ENST00000462817 GGACTQ9BVM4 153 aa11.26□□□□□ -0.61
LIMS1-211ENST00000462817 SCRT1Q9BWW7 348 aa11.26□□□□□ -0.61
LIMS1-211ENST00000462817 SLC25A39Q9BZJ4 359 aaPredicted RBP11.26□□□□□ -0.61
LIMS1-211ENST00000462817 ALMS1Q8TCU4 4167 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 IGHV3OR16-12A0A075B7B8 117 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 H3BRN7 92 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 K7EPK0 472 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 DEDDO75618 318 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 RBMY1A1P0DJD3 496 aaKnown RBP11.25□□□□□ -0.61
LIMS1-211ENST00000462817 RBMY1CP0DJD4 496 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
LIMS1-211ENST00000462817 SLC38A11Q08AI6 406 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 ASAH1Q13510 395 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 RAB31Q13636 194 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 RBMY1FQ15415 496 aaKnown RBP11.25□□□□□ -0.61
LIMS1-211ENST00000462817 ZNF546Q86UE3 836 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 C2CD4CQ8TF44 421 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 SHANK2-AS3Q9BTD1 123 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 HRH4Q9H3N8 390 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 X6R8D5 127 aa11.25□□□□□ -0.61
LIMS1-211ENST00000462817 PLECQ15149 4684 aaKnown RBP11.24□□□□□ -0.61
LIMS1-211ENST00000462817 DNAH1Q9P2D7 4330 aa11.24□□□□□ -0.61
LIMS1-211ENST00000462817 C11orf94C9JXX5 98 aa11.24□□□□□ -0.61
LIMS1-211ENST00000462817 F6UB75 175 aa11.24□□□□□ -0.61
LIMS1-211ENST00000462817 PSG9Q00887 426 aa11.24□□□□□ -0.61
LIMS1-211ENST00000462817 FAM78BQ5VT40 261 aa11.24□□□□□ -0.61
LIMS1-211ENST00000462817 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.24□□□□□ -0.61
LIMS1-211ENST00000462817 GPN1Q9HCN4 374 aaPredicted RBP11.24□□□□□ -0.61
LIMS1-211ENST00000462817 HYDINQ4G0P3 5121 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 A0A0J9YX75 114 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 AGPAT2O15120 278 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 PLP1P60201 277 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 ARL16Q0P5N6 197 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 UHRF2Q96PU4 802 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 ARV1Q9H2C2 271 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 GOLT1BQ9Y3E0 138 aa11.23□□□□□ -0.61
LIMS1-211ENST00000462817 ELOA3CA0A087WX78 387 aaPredicted RBP11.22□□□□□ -0.61
LIMS1-211ENST00000462817 FAM24AA6NFZ4 105 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 A6NHS1 94 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 IGLL5B9A064 214 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 COX7A2P2O60397 106 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 UPK1BO75841 260 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 CST7O76096 145 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 STX12Q86Y82 276 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 C20orf173Q96LM9 149 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 SLC35B3Q9H1N7 401 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 PTTG2Q9NZH5 202 aa11.22□□□□□ -0.61
LIMS1-211ENST00000462817 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.61
LIMS1-211ENST00000462817 CAMLGP49069 296 aa11.21□□□□□ -0.61
LIMS1-211ENST00000462817 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
LIMS1-211ENST00000462817 Q6ZRG5 221 aa11.21□□□□□ -0.61
LIMS1-211ENST00000462817 LINC00305Q7Z4B0 112 aa11.21□□□□□ -0.61
LIMS1-211ENST00000462817 ZNF738Q8NE65 137 aa11.21□□□□□ -0.61
LIMS1-211ENST00000462817 TMEM208Q9BTX3 173 aa11.21□□□□□ -0.61
LIMS1-211ENST00000462817 UQCC1Q9NVA1 299 aa11.21□□□□□ -0.61
LIMS1-211ENST00000462817 PPP1R14DQ9NXH3 145 aa11.21□□□□□ -0.61
LIMS1-211ENST00000462817 TRAV10A0A0B4J240 114 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 S100A11P31949 105 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 EMP1P54849 157 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 TCTAP57738 103 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 HBG1P69891 147 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 HBG2P69892 147 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 RAB32Q13637 225 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 Q6ZTC4 211 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 RNF182Q8N6D2 247 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 NEU1Q99519 415 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 MGST2Q99735 147 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
LIMS1-211ENST00000462817 HBE1P02100 147 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 RLN2P04090 185 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 SULT1A1P50225 295 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 DEFA1P59665 94 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 DEFA3P59666 94 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 BAXQ07812 192 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 C10orf113Q5VZT2 155 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 PATE2Q6UY27 113 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 ZNF705AQ6ZN79 300 aaPredicted RBP11.19□□□□□ -0.62
LIMS1-211ENST00000462817 NRARPQ7Z6K4 114 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 BPIFA4PQ86YQ2 179 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 ZNF709Q8N972 641 aa11.19□□□□□ -0.62
LIMS1-211ENST00000462817 LYRM2Q9NU23 88 aaPredicted RBP11.19□□□□□ -0.62
LIMS1-211ENST00000462817 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
LIMS1-211ENST00000462817 PRAF2O60831 178 aa11.18□□□□□ -0.62
LIMS1-211ENST00000462817 AMBPP02760 352 aa11.18□□□□□ -0.62
LIMS1-211ENST00000462817 SPART-AS1P0CW21 52 aa11.18□□□□□ -0.62
LIMS1-211ENST00000462817 CNN1P51911 297 aaKnown RBP11.18□□□□□ -0.62
LIMS1-211ENST00000462817 RHOBP62745 196 aa11.18□□□□□ -0.62
LIMS1-211ENST00000462817 LGALS9CQ6DKI2 356 aa11.18□□□□□ -0.62
LIMS1-211ENST00000462817 TMEM252Q8N6L7 170 aa11.18□□□□□ -0.62
LIMS1-211ENST00000462817 OR1L4Q8NGR5 311 aa11.18□□□□□ -0.62
LIMS1-211ENST00000462817 C17orf77Q96MU5 243 aa11.18□□□□□ -0.62
LIMS1-211ENST00000462817 CELA1Q9UNI1 258 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms