RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 ZNF705AQ6ZN79 300 aaPredicted RBP11.13□□□□□ -0.63
NUP50-213ENST00000461437 SMIM8Q96KF7 97 aa11.13□□□□□ -0.63
NUP50-213ENST00000461437 C7orf50Q9BRJ6 194 aaKnown RBP11.13□□□□□ -0.63
NUP50-213ENST00000461437 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
NUP50-213ENST00000461437 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 TRAV8-2A0A0B4J237 113 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 TRAV10A0A0B4J240 114 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 C11orf94C9JXX5 98 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 LYRM1O43325 122 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 MBPP02686 304 aaPredicted RBP11.12□□□□□ -0.63
NUP50-213ENST00000461437 PRM2P04554 102 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 SNRPCP09234 159 aaKnown RBP11.12□□□□□ -0.63
NUP50-213ENST00000461437 OR5G3P0C626 314 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 LINC00869P0C866 280 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 EBLN2Q6P2I7 272 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 MITD1Q8WV92 249 aa11.12□□□□□ -0.63
NUP50-213ENST00000461437 ZNF705FA8MVS1 300 aaPredicted RBP11.11□□□□□ -0.63
NUP50-213ENST00000461437 FAM25EA8MYX2 175 aa11.11□□□□□ -0.63
NUP50-213ENST00000461437 CFDP00746 253 aaPredicted RBP11.11□□□□□ -0.63
NUP50-213ENST00000461437 DLK1P80370 383 aa11.11□□□□□ -0.63
NUP50-213ENST00000461437 PSG9Q00887 426 aa11.11□□□□□ -0.63
NUP50-213ENST00000461437 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
NUP50-213ENST00000461437 RPRMQ9NS64 109 aa11.11□□□□□ -0.63
NUP50-213ENST00000461437 HIGD1AQ9Y241 93 aa11.11□□□□□ -0.63
NUP50-213ENST00000461437 LSM5Q9Y4Y9 91 aaKnown RBP11.11□□□□□ -0.63
NUP50-213ENST00000461437 DEFB131BA0A096LNP1 70 aa11.1□□□□□ -0.63
NUP50-213ENST00000461437 C7orf66A4D0T2 115 aa11.1□□□□□ -0.63
NUP50-213ENST00000461437 TCRBP04435 133 aa11.1□□□□□ -0.63
NUP50-213ENST00000461437 PATE2Q6UY27 113 aa11.1□□□□□ -0.63
NUP50-213ENST00000461437 SHANK2-AS3Q9BTD1 123 aa11.1□□□□□ -0.63
NUP50-213ENST00000461437 ARL6Q9H0F7 186 aa11.1□□□□□ -0.63
NUP50-213ENST00000461437 SLC45A2Q9UMX9 530 aa11.1□□□□□ -0.63
NUP50-213ENST00000461437 M0R2Z0 102 aa11.09□□□□□ -0.63
NUP50-213ENST00000461437 HYPMO75409 117 aa11.09□□□□□ -0.63
NUP50-213ENST00000461437 MEOX2P50222 304 aa11.09□□□□□ -0.63
NUP50-213ENST00000461437 CNN1P51911 297 aaKnown RBP11.09□□□□□ -0.63
NUP50-213ENST00000461437 RAP2BP61225 183 aa11.09□□□□□ -0.63
NUP50-213ENST00000461437 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
NUP50-213ENST00000461437 AMTNQ6UX39 209 aa11.09□□□□□ -0.63
NUP50-213ENST00000461437 OR10P1Q8NGE3 313 aa11.09□□□□□ -0.63
NUP50-213ENST00000461437 NUDT15Q9NV35 164 aa11.09□□□□□ -0.63
NUP50-213ENST00000461437 H3BTX0 84 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 TSC22D2O75157 780 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 FAM222AQ5U5X8 452 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 ZNF738Q8NE65 137 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 OR11H7Q8NGC8 314 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 NEU1Q99519 415 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 ARV1Q9H2C2 271 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 NPVFQ9HCQ7 196 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 MGAT4CQ9UBM8 478 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 DNAH2Q9P225 4427 aa11.08□□□□□ -0.64
NUP50-213ENST00000461437 HERC2O95714 4834 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 TRAV12-2A0A075B6T6 113 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 FAM24AA6NFZ4 105 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 K7EPK0 472 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 BCAP31P51572 246 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 PLP1P60201 277 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 MORN5Q5VZ52 161 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 TEPPQ6URK8 271 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 BAP18Q8IXM2 172 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 ZNF431Q8TF32 576 aaPredicted RBP11.07□□□□□ -0.64
NUP50-213ENST00000461437 CLUHP3Q96NS8 147 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 MGST2Q99735 147 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 GOLT1BQ9Y3E0 138 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 RFNGQ9Y644 331 aa11.07□□□□□ -0.64
NUP50-213ENST00000461437 LOC102723971A0A1B0GUV8 181 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 C5orf51A6NDU8 294 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 A8MTW9 85 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 ZNF705GA8MUZ8 300 aaPredicted RBP11.06□□□□□ -0.64
NUP50-213ENST00000461437 L7N2F9 121 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 AGPAT2O15120 278 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 CRXO43186 299 aaPredicted RBP11.06□□□□□ -0.64
NUP50-213ENST00000461437 CST7O76096 145 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 SPART-AS1P0CW21 52 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 HTN3P15516 51 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 TCTAP57738 103 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 TAS2R30P59541 319 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 VAMP2P63027 116 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 SPATA31B1PQ5VZV4 182 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 GPR82Q96P67 336 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 RNF126Q9BV68 326 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 NDUFA13Q9P0J0 144 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 DKK2Q9UBU2 259 aa11.06□□□□□ -0.64
NUP50-213ENST00000461437 YTHDF2Q9Y5A9 579 aaKnown RBP11.06□□□□□ -0.64
NUP50-213ENST00000461437 SMIM9A6NGZ8 99 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 GOSR2O14653 212 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 MRPS12O15235 138 aaKnown RBP11.05□□□□□ -0.64
NUP50-213ENST00000461437 HBE1P02100 147 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 H2AFB2P0C5Z0 115 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 RPL7P18124 248 aaKnown RBP11.05□□□□□ -0.64
NUP50-213ENST00000461437 CXCL3P19876 107 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 CAV2P51636 162 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 SELENOTP62341 195 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 HIST1H1AQ02539 215 aaPredicted RBP11.05□□□□□ -0.64
NUP50-213ENST00000461437 ZNF846Q147U1 533 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 SAMD13Q5VXD3 122 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 C12orf45Q8N5I9 185 aaPredicted RBP11.05□□□□□ -0.64
NUP50-213ENST00000461437 TMEM208Q9BTX3 173 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 C11orf1Q9H5F2 150 aa11.05□□□□□ -0.64
NUP50-213ENST00000461437 FAT2Q9NYQ8 4349 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms