RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 KCNIP2Q9NS61 270 aa8.43□□□□□ -1.06
SSBP1-202ENST00000461433 C19orf73Q9NVV2 129 aa8.43□□□□□ -1.06
SSBP1-202ENST00000461433 MEGF8Q7Z7M0 2845 aa8.42□□□□□ -1.06
SSBP1-202ENST00000461433 BORCS7-ASMTA0A0B4J1R7 106 aa8.42□□□□□ -1.06
SSBP1-202ENST00000461433 TRAV5A0A0B4J249 113 aa8.42□□□□□ -1.06
SSBP1-202ENST00000461433 HELTA6NFD8 242 aa8.42□□□□□ -1.06
SSBP1-202ENST00000461433 MRPS12O15235 138 aaKnown RBP8.42□□□□□ -1.06
SSBP1-202ENST00000461433 JTBO76095 146 aa8.42□□□□□ -1.06
SSBP1-202ENST00000461433 CD7P09564 240 aa8.42□□□□□ -1.06
SSBP1-202ENST00000461433 RPL11P62913 178 aaKnown RBP8.42□□□□□ -1.06
SSBP1-202ENST00000461433 FFAR4Q5NUL3 377 aa8.42□□□□□ -1.06
SSBP1-202ENST00000461433 OR8I2Q8N0Y5 310 aa8.42□□□□□ -1.06
SSBP1-202ENST00000461433 PSMG3Q9BT73 122 aaPredicted RBP8.42□□□□□ -1.06
SSBP1-202ENST00000461433 SH3BGRL3Q9H299 93 aa8.42□□□□□ -1.06
SSBP1-202ENST00000461433 SEPSECSQ9HD40 501 aaKnown RBP8.42□□□□□ -1.06
SSBP1-202ENST00000461433 K7EQG2 157 aa8.41□□□□□ -1.06
SSBP1-202ENST00000461433 BCL2L11O43521 198 aa8.41□□□□□ -1.06
SSBP1-202ENST00000461433 TFPI2P48307 235 aa8.41□□□□□ -1.06
SSBP1-202ENST00000461433 DEFA6Q01524 100 aa8.41□□□□□ -1.06
SSBP1-202ENST00000461433 SPATA31B1PQ5VZV4 182 aa8.41□□□□□ -1.06
SSBP1-202ENST00000461433 FAM24BQ8N5W8 94 aa8.41□□□□□ -1.06
SSBP1-202ENST00000461433 STXBP6Q8NFX7 210 aa8.41□□□□□ -1.06
SSBP1-202ENST00000461433 OR2G3Q8NGZ4 309 aa8.41□□□□□ -1.06
SSBP1-202ENST00000461433 TRAV2A0A0B4J234 112 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 OR4C46A6NHA9 309 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 S100A7P31151 101 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 PAFAH1B2P68402 229 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 ZFP69Q49AA0 526 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 FAM78BQ5VT40 261 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 S100A7AQ86SG5 101 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 WFDC3Q8IUB2 231 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 C9orf62Q8N4C0 152 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 GPR82Q96P67 336 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 NRN1Q9NPD7 142 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 BOLA1Q9Y3E2 137 aa8.4□□□□□ -1.06
SSBP1-202ENST00000461433 KANTRA0A1W2PQU2 76 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 DNASE2O00115 360 aaPredicted RBP8.4□□□□□ -1.07
SSBP1-202ENST00000461433 SOCS3O14543 225 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 CD81P60033 236 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 RAB2AP61019 212 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 SERF2P84101 59 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 ODF3L2Q3SX64 289 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 MIR17HGQ75NE6 70 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 GTSCR1Q86UQ5 136 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 GNPNAT1Q96EK6 184 aaPredicted RBP8.4□□□□□ -1.07
SSBP1-202ENST00000461433 FAM167A-AS1Q96KT0 104 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 WFDC10AQ9H1F0 79 aa8.4□□□□□ -1.07
SSBP1-202ENST00000461433 SPP1P10451 314 aa8.39□□□□□ -1.07
SSBP1-202ENST00000461433 RPL7P18124 248 aaKnown RBP8.39□□□□□ -1.07
SSBP1-202ENST00000461433 M6PRP20645 277 aa8.39□□□□□ -1.07
SSBP1-202ENST00000461433 GALR1P47211 349 aa8.39□□□□□ -1.07
SSBP1-202ENST00000461433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.39□□□□□ -1.07
SSBP1-202ENST00000461433 FAM110AQ9BQ89 295 aa8.39□□□□□ -1.07
SSBP1-202ENST00000461433 SLC25A2Q9BXI2 301 aa8.39□□□□□ -1.07
SSBP1-202ENST00000461433 UBQLN2Q9UHD9 624 aa8.39□□□□□ -1.07
SSBP1-202ENST00000461433 FUT9Q9Y231 359 aa8.39□□□□□ -1.07
SSBP1-202ENST00000461433 A0A087X0K7 114 aa8.38□□□□□ -1.07
SSBP1-202ENST00000461433 PFDN1O60925 122 aa8.38□□□□□ -1.07
SSBP1-202ENST00000461433 IGLC2P0DOY2 106 aa8.38□□□□□ -1.07
SSBP1-202ENST00000461433 NKX2-5P52952 324 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-202ENST00000461433 ACOT6Q3I5F7 207 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-202ENST00000461433 BPIFA4PQ86YQ2 179 aa8.38□□□□□ -1.07
SSBP1-202ENST00000461433 RPP25LQ8N5L8 163 aaKnown RBP8.38□□□□□ -1.07
SSBP1-202ENST00000461433 CITED4Q96RK1 184 aa8.38□□□□□ -1.07
SSBP1-202ENST00000461433 ZNF471Q9BX82 626 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-202ENST00000461433 MRPL32Q9BYC8 188 aaKnown RBP8.38□□□□□ -1.07
SSBP1-202ENST00000461433 MAP6D1Q9H9H5 199 aa8.38□□□□□ -1.07
SSBP1-202ENST00000461433 RNF24Q9Y225 148 aa8.38□□□□□ -1.07
SSBP1-202ENST00000461433 OR11H12B2RN74 326 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 H3BQ15 152 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.077e-6■□□□□ 9.1
SSBP1-202ENST00000461433 SNRPCP09234 159 aaKnown RBP8.37□□□□□ -1.07
SSBP1-202ENST00000461433 ZNF124Q15973 351 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 DEFB125Q8N687 156 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 OR10G4Q8NGN3 311 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 OR10G9Q8NGN4 311 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 OR10G7Q8NGN6 311 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 STOML3Q8TAV4 291 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 ZNF503Q96F45 646 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 RPRMQ9NS64 109 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 TMEM14CQ9P0S9 112 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 TRAV8-2A0A0B4J237 113 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 A8MZ25 164 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 IGHV4-30-4P0DP06 118 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 PYYP10082 97 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 RHOBP62745 196 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 APRG1Q8IVJ8 170 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 BAP18Q8IXM2 172 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 SAT2Q96F10 170 aaPredicted RBP8.37□□□□□ -1.07
SSBP1-202ENST00000461433 HRH4Q9H3N8 390 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 ZNF586Q9NXT0 402 aa8.37□□□□□ -1.07
SSBP1-202ENST00000461433 MBP02144 154 aa8.36□□□□□ -1.07
SSBP1-202ENST00000461433 SEC11BP0C7V7 166 aa8.36□□□□□ -1.07
SSBP1-202ENST00000461433 ATF4P18848 351 aaPredicted RBP8.36□□□□□ -1.07
SSBP1-202ENST00000461433 MEOX2P50222 304 aa8.36□□□□□ -1.07
SSBP1-202ENST00000461433 DEFB131AP59861 70 aa8.36□□□□□ -1.07
SSBP1-202ENST00000461433 TMEM41BQ5BJD5 291 aa8.36□□□□□ -1.07
SSBP1-202ENST00000461433 IGFL4Q6B9Z1 124 aa8.36□□□□□ -1.07
SSBP1-202ENST00000461433 FAM122CQ6P4D5 195 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms