RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 RAB11AP62491 216 aa10.18□□□□□ -0.78
DNMT3A-207ENST00000461228 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.18□□□□□ -0.78
DNMT3A-207ENST00000461228 PPP1R14BQ96C90 147 aa10.18□□□□□ -0.78
DNMT3A-207ENST00000461228 C17orf77Q96MU5 243 aa10.18□□□□□ -0.78
DNMT3A-207ENST00000461228 CIB3Q96Q77 187 aaPredicted RBP10.18□□□□□ -0.78
DNMT3A-207ENST00000461228 RBKSQ9H477 322 aa10.18□□□□□ -0.78
DNMT3A-207ENST00000461228 RSL24D1Q9UHA3 163 aaKnown RBP10.18□□□□□ -0.78
DNMT3A-207ENST00000461228 CBY3A6NI87 242 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 ZNF98A6NK75 572 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 H3BNG1 76 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 TAS2R60P59551 318 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 FAAP20Q6NZ36 180 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 ZNF493Q6ZR52 646 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 C20orf173Q96LM9 149 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 C20orf144Q9BQM9 153 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 SCP2D1Q9UJQ7 156 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 MYCBP2O75592 4640 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 FAT1Q14517 4588 aa10.17□□□□□ -0.78
DNMT3A-207ENST00000461228 A0A087X0K7 114 aa10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 ANKRD20A5PA0PJZ0 165 aa10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 LINC00612Q8N6U2 182 aa10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 LRTM2Q8N967 370 aa10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 BPIFCQ8NFQ6 507 aa10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 OR1S1Q8NH92 325 aa10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 TMEM263Q8WUH6 116 aaKnown RBP10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 RBM38Q9H0Z9 239 aaKnown RBP10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 RNF24Q9Y225 148 aa10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 LINC00588Q9Y4M8 146 aa10.16□□□□□ -0.78
DNMT3A-207ENST00000461228 M0R2Z0 102 aa10.15□□□□□ -0.78
DNMT3A-207ENST00000461228 CXCL2P19875 107 aa10.15□□□□□ -0.78
DNMT3A-207ENST00000461228 RPP30P78346 268 aaKnown RBP10.15□□□□□ -0.78
DNMT3A-207ENST00000461228 SPINK13Q1W4C9 94 aa10.15□□□□□ -0.78
DNMT3A-207ENST00000461228 OR51S1Q8NGJ8 323 aa10.15□□□□□ -0.78
DNMT3A-207ENST00000461228 OR10J6PQ8NGY7 276 aa10.15□□□□□ -0.78
DNMT3A-207ENST00000461228 RNF141Q8WVD5 230 aa10.15□□□□□ -0.78
DNMT3A-207ENST00000461228 MIXL1Q9H2W2 232 aa10.15□□□□□ -0.78
DNMT3A-207ENST00000461228 H3BRN7 92 aa10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 MED6O75586 246 aa10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 RPL7P18124 248 aaKnown RBP10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 C4orf46Q504U0 113 aa10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 LYZL2Q7Z4W2 148 aa10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 S100A7AQ86SG5 101 aa10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 CLVS1Q8IUQ0 354 aaPredicted RBP10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 BAP18Q8IXM2 172 aa10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 TMEM147Q9BVK8 224 aa10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 TIMM8BQ9Y5J9 83 aaPredicted RBP10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 VPS13BQ7Z7G8 4022 aa10.14□□□□□ -0.79
DNMT3A-207ENST00000461228 TRAV8-2A0A0B4J237 113 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 F5H768 121 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 ADAP1O75689 374 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 DEFB130BP0DP73 79 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 DEFB130AP0DP74 79 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 PLP1P60201 277 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 SSX7Q7RTT5 188 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 SPATA12Q7Z6I5 190 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 DEDD2Q8WXF8 326 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 RSG1Q9BU20 258 aa10.13□□□□□ -0.79
DNMT3A-207ENST00000461228 ZNF705GA8MUZ8 300 aaPredicted RBP10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 H7BYZ3 331 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 K7EPK0 472 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 NUDT3O95989 172 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 OR2F1Q13607 317 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 CLINT1Q14677 625 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 TMEM128Q5BJH2 165 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 CDPF1Q6NVV7 123 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 ACOT7LQ6ZUV0 252 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 SHANK2-AS3Q9BTD1 123 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 KRTAP1-5Q9BYS1 174 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 SLC25A22Q9H936 323 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 SCRT2Q9NQ03 307 aa10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 MRPS16Q9Y3D3 137 aaKnown RBP10.12□□□□□ -0.79
DNMT3A-207ENST00000461228 RGS5O15539 181 aa10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 CXCL3P19876 107 aa10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 M6PRP20645 277 aa10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 CDKN1BP46527 198 aa10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 SELENOTP62341 195 aa10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 TMEM144Q7Z5S9 345 aa10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 OR8A1Q8NGG7 326 aa10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 RXFP4Q8TDU9 374 aa10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 Q9H8V8 135 aa10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 CCDC59Q9P031 241 aaKnown RBP10.11□□□□□ -0.79
DNMT3A-207ENST00000461228 FNDC10F2Z333 226 aa10.1□□□□□ -0.79
DNMT3A-207ENST00000461228 ZNF738Q8NE65 137 aa10.1□□□□□ -0.79
DNMT3A-207ENST00000461228 C18orf15Q96N68 181 aa10.1□□□□□ -0.79
DNMT3A-207ENST00000461228 BCL7BQ9BQE9 202 aa10.1□□□□□ -0.79
DNMT3A-207ENST00000461228 SLC25A39Q9BZJ4 359 aaPredicted RBP10.1□□□□□ -0.79
DNMT3A-207ENST00000461228 SYNGR2O43760 224 aa10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 AZU1P20160 251 aa10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 FAUP35544 74 aaKnown RBP10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 RAP2BP61225 183 aa10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 AKR1C1Q04828 323 aa10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 IL18Q14116 193 aa10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 LCN15Q6UWW0 184 aa10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 RNF182Q8N6D2 247 aa10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 GNPNAT1Q96EK6 184 aaPredicted RBP10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 ODF3Q96PU9 254 aa10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 NAA50Q9GZZ1 169 aaKnown RBP10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 PRR13Q9NZ81 148 aa10.09□□□□□ -0.79
DNMT3A-207ENST00000461228 PFDN1O60925 122 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms