RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 RPL35AP18077 110 aaKnown RBP7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 RPL7P18124 248 aaKnown RBP7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 GATA2P23769 480 aaPredicted RBP7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 CAMLGP49069 296 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 PSMB3P49720 205 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 BAXQ07812 192 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 Q6ZRG5 221 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 Q6ZWC4 215 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 PPP1R1CQ8WVI7 109 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 ARL6Q9H0F7 186 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 C11orf1Q9H5F2 150 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 KCNIP2Q9NS61 270 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 DOK5Q9P104 306 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 TP53TG1Q9Y2A0 90 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 ALG5Q9Y673 324 aa7.67□□□□□ -1.18
HLA-DQB1-207ENST00000460185 IGSF23A1L1A6 192 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 ZNF98A6NK75 572 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 COX7A2P2O60397 106 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 MPDU1O75352 247 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 ATF4P18848 351 aaPredicted RBP7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 H2BFSP57053 126 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 PLP1P60201 277 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 TMEM41BQ5BJD5 291 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 PSMG4Q5JS54 123 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 LEMD1Q68G75 181 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 PFDN5Q99471 154 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 SLC25A39Q9BZJ4 359 aaPredicted RBP7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 MED28Q9H204 178 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 WDR83OSQ9Y284 106 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 NBEAL2Q6ZNJ1 2754 aa7.66□□□□□ -1.18
HLA-DQB1-207ENST00000460185 H3BRN7 92 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 ISLRO14498 428 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 SPP1P10451 314 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 FGF7P21781 194 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 NUTF2P61970 127 aaKnown RBP7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 EWSR1Q01844 656 aaKnown RBP eCLIP7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 ARL16Q0P5N6 197 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 ZNF124Q15973 351 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 VWC2Q2TAL6 325 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 DEFB135Q30KP9 77 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 MORN3Q6PF18 240 aaPredicted RBP7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 FAM24BQ8N5W8 94 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 OR5C1Q8NGR4 320 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 OR1L4Q8NGR5 311 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 MGST2Q99735 147 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 SHANK2-AS3Q9BTD1 123 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 SCRT1Q9BWW7 348 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 CSTL1Q9H114 145 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 ARV1Q9H2C2 271 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 SLC25A32Q9H2D1 315 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 RETNQ9HD89 108 aa7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.65□□□□□ -1.18
HLA-DQB1-207ENST00000460185 SPRY2O43597 315 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 MPC2O95563 127 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 CA1P00915 261 aaPredicted RBP7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 C10orf113Q5VZT2 155 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 TMEM182Q6ZP80 229 aaPredicted RBP7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 IL17DQ8TAD2 202 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 THAP6Q8TBB0 222 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 GATAD1Q8WUU5 269 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 ASB13Q8WXK3 278 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 C16orf92Q96LL3 132 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 C1QTNF4Q9BXJ3 329 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 OR5AC2Q9NZP5 309 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 AGRNO00468 2067 aa7.64□□□□□ -1.19
HLA-DQB1-207ENST00000460185 C17orf112F2Z3M2 114 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 C3orf84H3BNL1 204 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 RPL29P47914 159 aaKnown RBP7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 B2MP61769 119 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 FGL1Q08830 312 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 OPCMLQ14982 345 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 ACTL10Q5JWF8 245 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 SPATA31B1PQ5VZV4 182 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 LINC00305Q7Z4B0 112 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 TRPT1Q86TN4 253 aaKnown RBP7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 BPIFA4PQ86YQ2 179 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 ZNF709Q8N972 641 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 MUC7Q8TAX7 377 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 LRRC20Q8TCA0 184 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 UHRF2Q96PU4 802 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 RPRMQ9NS64 109 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 MBD2Q9UBB5 411 aa7.63□□□□□ -1.19
HLA-DQB1-207ENST00000460185 RPL12P30050 165 aaKnown RBP7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 NHLH2Q02577 135 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 CLINT1Q14677 625 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 MIC13Q5XKP0 118 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 EBLN2Q6P2I7 272 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 LCN15Q6UWW0 184 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 FOXI2Q6ZQN5 318 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 RNF183Q96D59 192 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 LINC00052Q96N35 136 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 ATP5SQ99766 215 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 OVOL2Q9BRP0 275 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 RSG1Q9BU20 258 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 NPCDR1Q9BY65 106 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 EDA2RQ9HAV5 297 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 SLC39A9Q9NUM3 307 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 PXMP4Q9Y6I8 212 aa7.62□□□□□ -1.19
HLA-DQB1-207ENST00000460185 A0A087X0K7 114 aa7.61□□□□□ -1.19
HLA-DQB1-207ENST00000460185 KNCNA6PVL3 124 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms