RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 LINC00052Q96N35 136 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 ARV1Q9H2C2 271 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 SLC25A32Q9H2D1 315 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 OR5AC2Q9NZP5 309 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 UBE2L5PA0A1B0GUS4 154 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 RPL29P47914 159 aaKnown RBP11.89□□□□□ -0.51
CD28-203ENST00000458610 NHLH2Q02577 135 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 DEFB135Q30KP9 77 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 C10orf113Q5VZT2 155 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 SPATA31B1PQ5VZV4 182 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 TRPT1Q86TN4 253 aaKnown RBP11.89□□□□□ -0.51
CD28-203ENST00000458610 OR5C1Q8NGR4 320 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 THAP6Q8TBB0 222 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 PFDN5Q99471 154 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 SCRT1Q9BWW7 348 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 EDA2RQ9HAV5 297 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 DNAJC4Q9NNZ3 241 aa11.89□□□□□ -0.51
CD28-203ENST00000458610 KNCNA6PVL3 124 aa11.88□□□□□ -0.51
CD28-203ENST00000458610 H0YIZ8 118 aa11.88□□□□□ -0.51
CD28-203ENST00000458610 FGF7P21781 194 aa11.88□□□□□ -0.51
CD28-203ENST00000458610 LINC00305Q7Z4B0 112 aa11.88□□□□□ -0.51
CD28-203ENST00000458610 ZNF709Q8N972 641 aa11.88□□□□□ -0.51
CD28-203ENST00000458610 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
CD28-203ENST00000458610 RNF126Q9BV68 326 aa11.88□□□□□ -0.51
CD28-203ENST00000458610 CA1P00915 261 aaPredicted RBP11.87□□□□□ -0.51
CD28-203ENST00000458610 LYL1P12980 280 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 PRR20EP86478 221 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 PRR20CP86479 221 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 PRR20DP86480 221 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 PRR20BP86481 221 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 PRR20AP86496 221 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 FGL1Q08830 312 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 EBLN2Q6P2I7 272 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 PATE2Q6UY27 113 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 FOXI2Q6ZQN5 318 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 LRRC20Q8TCA0 184 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 UHRF2Q96PU4 802 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 C1QTNF4Q9BXJ3 329 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 KCNIP2Q9NS61 270 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 RPRMQ9NS64 109 aa11.87□□□□□ -0.51
CD28-203ENST00000458610 SOCS3O14543 225 aa11.86□□□□□ -0.51
CD28-203ENST00000458610 RPL12P30050 165 aaKnown RBP11.86□□□□□ -0.51
CD28-203ENST00000458610 B2MP61769 119 aa11.86□□□□□ -0.51
CD28-203ENST00000458610 OPCMLQ14982 345 aa11.86□□□□□ -0.51
CD28-203ENST00000458610 MIC13Q5XKP0 118 aa11.86□□□□□ -0.51
CD28-203ENST00000458610 BPIFA4PQ86YQ2 179 aa11.86□□□□□ -0.51
CD28-203ENST00000458610 SLC39A9Q9NUM3 307 aa11.86□□□□□ -0.51
CD28-203ENST00000458610 DNAH9Q9NYC9 4486 aa11.86□□□□□ -0.51
CD28-203ENST00000458610 C17orf112F2Z3M2 114 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 H3BMM0 161 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 HLA-DRB4P13762 266 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 CLINT1Q14677 625 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 TMEM37Q8WXS4 190 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 CLUHP3Q96NS8 147 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 RARRES2Q99969 163 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 SAV1Q9H4B6 383 aaPredicted RBP11.85□□□□□ -0.51
CD28-203ENST00000458610 PXMP4Q9Y6I8 212 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 HLA-DRB4X5D2U9 266 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 COL7A1Q02388 2944 aa11.85□□□□□ -0.51
CD28-203ENST00000458610 A0A087X0K7 114 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 IFNA5P01569 189 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 CXCL3P19876 107 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 FCN2Q15485 313 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 SCGB1C1Q8TD33 95 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 ATP5SQ99766 215 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 NPCDR1Q9BY65 106 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 MBD2Q9UBB5 411 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 HSPB11Q9Y547 144 aa11.84□□□□□ -0.51
CD28-203ENST00000458610 CXCL2P19875 107 aa11.83□□□□□ -0.52
CD28-203ENST00000458610 OR11H2Q8NH07 326 aa11.83□□□□□ -0.52
CD28-203ENST00000458610 WDR61Q9GZS3 305 aaKnown RBP11.83□□□□□ -0.52
CD28-203ENST00000458610 CLEC5AQ9NY25 188 aa11.83□□□□□ -0.52
CD28-203ENST00000458610 DUSP14O95147 198 aaKnown RBP11.82□□□□□ -0.52
CD28-203ENST00000458610 GIPP09681 153 aaPredicted RBP11.82□□□□□ -0.52
CD28-203ENST00000458610 OXA1LQ15070 435 aa11.82□□□□□ -0.52
CD28-203ENST00000458610 GUK1Q16774 197 aa11.82□□□□□ -0.52
CD28-203ENST00000458610 LCN15Q6UWW0 184 aa11.82□□□□□ -0.52
CD28-203ENST00000458610 OR11H7Q8NGC8 314 aa11.82□□□□□ -0.52
CD28-203ENST00000458610 OR4B1Q8NGF8 309 aa11.82□□□□□ -0.52
CD28-203ENST00000458610 SLC50A1Q9BRV3 221 aa11.82□□□□□ -0.52
CD28-203ENST00000458610 HRH4Q9H3N8 390 aa11.81□□□□□ -0.52
CD28-203ENST00000458610 STAB2Q8WWQ8 2551 aa11.8□□□□□ -0.52
CD28-203ENST00000458610 A0A0J9YWU9 116 aa11.8□□□□□ -0.52
CD28-203ENST00000458610 A0A0J9YX75 114 aa11.8□□□□□ -0.52
CD28-203ENST00000458610 MRPS12O15235 138 aaKnown RBP11.8□□□□□ -0.52
CD28-203ENST00000458610 PSG9Q00887 426 aa11.8□□□□□ -0.52
CD28-203ENST00000458610 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
CD28-203ENST00000458610 ZNF738Q8NE65 137 aa11.8□□□□□ -0.52
CD28-203ENST00000458610 C17orf77Q96MU5 243 aa11.8□□□□□ -0.52
CD28-203ENST00000458610 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
CD28-203ENST00000458610 GIG44P09565 113 aaPredicted RBP11.79□□□□□ -0.52
CD28-203ENST00000458610 PSG3Q16557 428 aa11.79□□□□□ -0.52
CD28-203ENST00000458610 FAM78BQ5VT40 261 aa11.79□□□□□ -0.52
CD28-203ENST00000458610 C20orf173Q96LM9 149 aa11.79□□□□□ -0.52
CD28-203ENST00000458610 PARD6GQ9BYG4 376 aaPredicted RBP11.79□□□□□ -0.52
CD28-203ENST00000458610 SMIM3Q9BZL3 60 aa11.79□□□□□ -0.52
CD28-203ENST00000458610 TMEM14CQ9P0S9 112 aa11.79□□□□□ -0.52
CD28-203ENST00000458610 IGKV3-20P01619 116 aa11.78□□□□□ -0.52
CD28-203ENST00000458610 AMBPP02760 352 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms