RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 MZT2BQ6NZ67 158 aa12.91□□□□□ -0.34
MSH6-207ENST00000456246 ZNF705AQ6ZN79 300 aaPredicted RBP12.91□□□□□ -0.34
MSH6-207ENST00000456246 OR4B1Q8NGF8 309 aa12.91□□□□□ -0.34
MSH6-207ENST00000456246 TRAV10A0A0B4J240 114 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 A0A0J9YX75 114 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 FAM240BA0A1B0GVZ2 78 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 TMEM189A5PLL7 270 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 DEDDO75618 318 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 CCNKO75909 580 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 IGKV3-20P01619 116 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 HLA-DMBP28068 263 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 PSG9Q00887 426 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 C12orf45Q8N5I9 185 aaPredicted RBP12.9□□□□□ -0.34
MSH6-207ENST00000456246 SCRT1Q9BWW7 348 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 DOK5Q9P104 306 aa12.9□□□□□ -0.34
MSH6-207ENST00000456246 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
MSH6-207ENST00000456246 C5orf51A6NDU8 294 aa12.89□□□□□ -0.35
MSH6-207ENST00000456246 A8MTW9 85 aa12.89□□□□□ -0.35
MSH6-207ENST00000456246 ZNF705FA8MVS1 300 aaPredicted RBP12.89□□□□□ -0.35
MSH6-207ENST00000456246 FAM25EA8MYX2 175 aa12.89□□□□□ -0.35
MSH6-207ENST00000456246 CCSO14618 274 aa12.89□□□□□ -0.35
MSH6-207ENST00000456246 OR5G3P0C626 314 aa12.89□□□□□ -0.35
MSH6-207ENST00000456246 ZNF705DP0CH99 300 aaPredicted RBP12.89□□□□□ -0.35
MSH6-207ENST00000456246 ZNF705BP0CI00 300 aaPredicted RBP12.89□□□□□ -0.35
MSH6-207ENST00000456246 PVALBP20472 110 aaPredicted RBP12.89□□□□□ -0.35
MSH6-207ENST00000456246 FAM78BQ5VT40 261 aa12.89□□□□□ -0.35
MSH6-207ENST00000456246 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
MSH6-207ENST00000456246 TEX48A0A1B0GUV7 120 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 GOSR2O14653 212 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 DUSP14O95147 198 aaKnown RBP12.88□□□□□ -0.35
MSH6-207ENST00000456246 AMBPP02760 352 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 DEFB1P60022 68 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 ASAH1Q13510 395 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 C2orf50Q96LR7 162 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 SEC22CQ9BRL7 303 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 ARL6Q9H0F7 186 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 GOLT1BQ9Y3E0 138 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 HYDINQ4G0P3 5121 aa12.88□□□□□ -0.35
MSH6-207ENST00000456246 A0A087X0K7 114 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 F6UB75 175 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 BCAP31P51572 246 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 RAB31Q13636 194 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 GSG1LQ6UXU4 331 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 Q6ZTC4 211 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 C17orf77Q96MU5 243 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 ARV1Q9H2C2 271 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 LSM5Q9Y4Y9 91 aaKnown RBP12.87□□□□□ -0.35
MSH6-207ENST00000456246 RFNGQ9Y644 331 aa12.87□□□□□ -0.35
MSH6-207ENST00000456246 IGLL5B9A064 214 aa12.86□□□□□ -0.35
MSH6-207ENST00000456246 AGPAT2O15120 278 aa12.86□□□□□ -0.35
MSH6-207ENST00000456246 CXCL2P19875 107 aa12.86□□□□□ -0.35
MSH6-207ENST00000456246 CAV2P51636 162 aa12.86□□□□□ -0.35
MSH6-207ENST00000456246 FXYD7P58549 80 aa12.86□□□□□ -0.35
MSH6-207ENST00000456246 FGL1Q08830 312 aa12.86□□□□□ -0.35
MSH6-207ENST00000456246 ARL16Q0P5N6 197 aa12.86□□□□□ -0.35
MSH6-207ENST00000456246 UHRF2Q96PU4 802 aa12.86□□□□□ -0.35
MSH6-207ENST00000456246 SLC35B3Q9H1N7 401 aa12.86□□□□□ -0.35
MSH6-207ENST00000456246 CELA1Q9UNI1 258 aa12.85□□□□□ -0.35
MSH6-207ENST00000456246 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 COX7A2P2O60397 106 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 HBE1P02100 147 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 SPART-AS1P0CW21 52 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 ZNF738Q8NE65 137 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 ENKURQ8TC29 256 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 LRRC20Q8TCA0 184 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 IGF2BP2-AS1Q96M15 143 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 RNF126Q9BV68 326 aa12.84□□□□□ -0.35
MSH6-207ENST00000456246 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
MSH6-207ENST00000456246 UPK1BO75841 260 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 CAMLGP49069 296 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 CNN1P51911 297 aaKnown RBP12.83□□□□□ -0.36
MSH6-207ENST00000456246 S100A10P60903 97 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 B2MP61769 119 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 HBG1P69891 147 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 HBG2P69892 147 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 C12orf74Q32Q52 190 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 LCN15Q6UWW0 184 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 AMTNQ6UX39 209 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 PATE2Q6UY27 113 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 Q6ZRG5 221 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 LINC00305Q7Z4B0 112 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 STX12Q86Y82 276 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 MGST2Q99735 147 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 C11orf1Q9H5F2 150 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 LYRM2Q9NU23 88 aaPredicted RBP12.83□□□□□ -0.36
MSH6-207ENST00000456246 UQCC1Q9NVA1 299 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 PTTG2Q9NZH5 202 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 APLNQ9ULZ1 77 aa12.83□□□□□ -0.36
MSH6-207ENST00000456246 DEFB131BA0A096LNP1 70 aa12.82□□□□□ -0.36
MSH6-207ENST00000456246 CST7O76096 145 aa12.82□□□□□ -0.36
MSH6-207ENST00000456246 CXCL3P19876 107 aa12.82□□□□□ -0.36
MSH6-207ENST00000456246 S100A11P31949 105 aa12.82□□□□□ -0.36
MSH6-207ENST00000456246 SULT1A1P50225 295 aa12.82□□□□□ -0.36
MSH6-207ENST00000456246 IL15RAQ13261 267 aa12.82□□□□□ -0.36
MSH6-207ENST00000456246 RRN3P1Q2M238 152 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms