RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SNRPD3P62318 126 aaKnown RBP10.41□□□□□ -0.74
HDAC4-205ENST00000454542 NHLH2Q02577 135 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 FCN2Q15485 313 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 PSMG4Q5JS54 123 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 OR5C1Q8NGR4 320 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 UHRF2Q96PU4 802 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 ARL6Q9H0F7 186 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 MBD2Q9UBB5 411 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 CSMD3Q7Z407 3707 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 A0A087X0K7 114 aa10.4□□□□□ -0.74
HDAC4-205ENST00000454542 ISLRO14498 428 aa10.4□□□□□ -0.74
HDAC4-205ENST00000454542 RPL7P18124 248 aaKnown RBP10.4□□□□□ -0.74
HDAC4-205ENST00000454542 MIC13Q5XKP0 118 aa10.4□□□□□ -0.74
HDAC4-205ENST00000454542 S100A7AQ86SG5 101 aa10.4□□□□□ -0.74
HDAC4-205ENST00000454542 ASB13Q8WXK3 278 aa10.4□□□□□ -0.74
HDAC4-205ENST00000454542 TMEM37Q8WXS4 190 aa10.4□□□□□ -0.74
HDAC4-205ENST00000454542 SLC25A22Q9H936 323 aa10.4□□□□□ -0.74
HDAC4-205ENST00000454542 HSPB11Q9Y547 144 aa10.4□□□□□ -0.74
HDAC4-205ENST00000454542 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
HDAC4-205ENST00000454542 GIG44P09565 113 aaPredicted RBP10.39□□□□□ -0.75
HDAC4-205ENST00000454542 OR5G3P0C626 314 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 FGF7P21781 194 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 RAB31Q13636 194 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 DEFB135Q30KP9 77 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 STHQ8IWL8 128 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 RNF183Q96D59 192 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 NPCDR1Q9BY65 106 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 CSTL1Q9H114 145 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 MED28Q9H204 178 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 RNF24Q9Y225 148 aa10.39□□□□□ -0.75
HDAC4-205ENST00000454542 ELOA3CA0A087WX78 387 aaPredicted RBP10.38□□□□□ -0.75
HDAC4-205ENST00000454542 KNCNA6PVL3 124 aa10.38□□□□□ -0.75
HDAC4-205ENST00000454542 GIPP09681 153 aaPredicted RBP10.38□□□□□ -0.75
HDAC4-205ENST00000454542 SPP1P10451 314 aa10.38□□□□□ -0.75
HDAC4-205ENST00000454542 HLA-DRB4P13762 266 aa10.38□□□□□ -0.75
HDAC4-205ENST00000454542 B2MP61769 119 aa10.38□□□□□ -0.75
HDAC4-205ENST00000454542 LINC00305Q7Z4B0 112 aa10.38□□□□□ -0.75
HDAC4-205ENST00000454542 WDR61Q9GZS3 305 aaKnown RBP10.38□□□□□ -0.75
HDAC4-205ENST00000454542 SLC39A9Q9NUM3 307 aa10.38□□□□□ -0.75
HDAC4-205ENST00000454542 PXMP4Q9Y6I8 212 aa10.38□□□□□ -0.75
HDAC4-205ENST00000454542 HLA-DRB4X5D2U9 266 aa10.38□□□□□ -0.75
HDAC4-205ENST00000454542 AGRNO00468 2067 aa10.38□□□□□ -0.75
HDAC4-205ENST00000454542 TRAV8-2A0A0B4J237 113 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 A8MTW9 85 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 SPRY2O43597 315 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 COX7A2P2O60397 106 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 C4BPBP20851 252 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
HDAC4-205ENST00000454542 ID1P41134 155 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 CLINT1Q14677 625 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 ACTL10Q5JWF8 245 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 MORN5Q5VZ52 161 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 MORN3Q6PF18 240 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-205ENST00000454542 FOXI2Q6ZQN5 318 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 OR1L4Q8NGR5 311 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 GATAD1Q8WUU5 269 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 C20orf173Q96LM9 149 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 CLUHP3Q96NS8 147 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 PFDN5Q99471 154 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 ATP5SQ99766 215 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 RSG1Q9BU20 258 aa10.37□□□□□ -0.75
HDAC4-205ENST00000454542 SAV1Q9H4B6 383 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-205ENST00000454542 H3BMM0 161 aa10.36□□□□□ -0.75
HDAC4-205ENST00000454542 CA1P00915 261 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-205ENST00000454542 CXCL2P19875 107 aa10.36□□□□□ -0.75
HDAC4-205ENST00000454542 TMEM41BQ5BJD5 291 aa10.36□□□□□ -0.75
HDAC4-205ENST00000454542 GDF5OSQ5U4N7 250 aa10.36□□□□□ -0.75
HDAC4-205ENST00000454542 C10orf113Q5VZT2 155 aa10.36□□□□□ -0.75
HDAC4-205ENST00000454542 Q6ZRG5 221 aa10.36□□□□□ -0.75
HDAC4-205ENST00000454542 THAP6Q8TBB0 222 aa10.36□□□□□ -0.75
HDAC4-205ENST00000454542 PARD6GQ9BYG4 376 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-205ENST00000454542 KMT2CQ8NEZ4 4911 aaKnown RBP10.35□□□□□ -0.75
HDAC4-205ENST00000454542 DYNC2H1Q8NCM8 4307 aaKnown RBP10.35□□□□□ -0.75
HDAC4-205ENST00000454542 C3orf84H3BNL1 204 aa10.35□□□□□ -0.75
HDAC4-205ENST00000454542 IGLC2P0DOY2 106 aa10.35□□□□□ -0.75
HDAC4-205ENST00000454542 ATF4P18848 351 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-205ENST00000454542 MUC7Q8TAX7 377 aa10.35□□□□□ -0.75
HDAC4-205ENST00000454542 C16orf92Q96LL3 132 aa10.35□□□□□ -0.75
HDAC4-205ENST00000454542 DNAJC4Q9NNZ3 241 aa10.35□□□□□ -0.75
HDAC4-205ENST00000454542 KCNIP2Q9NS61 270 aa10.35□□□□□ -0.75
HDAC4-205ENST00000454542 A0A0J9YX75 114 aa10.34□□□□□ -0.75
HDAC4-205ENST00000454542 G3V3Q6 166 aa10.34□□□□□ -0.75
HDAC4-205ENST00000454542 DEFB1P60022 68 aa10.34□□□□□ -0.75
HDAC4-205ENST00000454542 SPATA31B1PQ5VZV4 182 aa10.34□□□□□ -0.75
HDAC4-205ENST00000454542 LCN15Q6UWW0 184 aa10.34□□□□□ -0.75
HDAC4-205ENST00000454542 BPIFA4PQ86YQ2 179 aa10.34□□□□□ -0.75
HDAC4-205ENST00000454542 AQP10Q96PS8 301 aa10.34□□□□□ -0.75
HDAC4-205ENST00000454542 FGL1Q08830 312 aa10.33□□□□□ -0.76
HDAC4-205ENST00000454542 Q5BKY6 102 aa10.33□□□□□ -0.76
HDAC4-205ENST00000454542 GCSAMLQ5JQS6 135 aa10.33□□□□□ -0.76
HDAC4-205ENST00000454542 CSNK1G2-AS1Q8NCQ2 148 aa10.33□□□□□ -0.76
HDAC4-205ENST00000454542 LINC00052Q96N35 136 aa10.33□□□□□ -0.76
HDAC4-205ENST00000454542 WFDC1Q9HC57 220 aa10.33□□□□□ -0.76
HDAC4-205ENST00000454542 RPRMQ9NS64 109 aa10.33□□□□□ -0.76
HDAC4-205ENST00000454542 LYSTQ99698 3801 aa10.33□□□□□ -0.76
HDAC4-205ENST00000454542 ZNF709Q8N972 641 aa10.32□□□□□ -0.76
HDAC4-205ENST00000454542 SLC50A1Q9BRV3 221 aa10.32□□□□□ -0.76
HDAC4-205ENST00000454542 C11orf68Q9H3H3 251 aaKnown RBP10.32□□□□□ -0.76
HDAC4-205ENST00000454542 HRH4Q9H3N8 390 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms