RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 TNP2Q05952 138 aa16.72■□□□□ 0.27
LYSMD2-202ENST00000454181 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.72■□□□□ 0.27
LYSMD2-202ENST00000454181 PPP1R14DQ9NXH3 145 aa16.72■□□□□ 0.27
LYSMD2-202ENST00000454181 NACAE9PAV3 2078 aa16.71■□□□□ 0.27
LYSMD2-202ENST00000454181 NBDYA0A0U1RRE5 68 aa16.71■□□□□ 0.27
LYSMD2-202ENST00000454181 PRM2P04554 102 aa16.71■□□□□ 0.27
LYSMD2-202ENST00000454181 FAUP35544 74 aaKnown RBP16.71■□□□□ 0.27
LYSMD2-202ENST00000454181 AKR1C1Q04828 323 aa16.71■□□□□ 0.27
LYSMD2-202ENST00000454181 C6orf223Q8N319 242 aa16.71■□□□□ 0.27
LYSMD2-202ENST00000454181 ZNF738Q8NE65 137 aa16.71■□□□□ 0.27
LYSMD2-202ENST00000454181 KRTAP4-5Q9BYR2 181 aa16.71■□□□□ 0.27
LYSMD2-202ENST00000454181 WRBO00258 174 aa16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 ATP5G1P05496 136 aa16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 SLC25A6P12236 298 aa16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 VAMP1P23763 118 aa16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 GATA2P23769 480 aaPredicted RBP16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 TSPOP30536 169 aa16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 ATP5G3P48201 142 aa16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 TMEM128Q5BJH2 165 aa16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 IGFL4Q6B9Z1 124 aa16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 LINC01587Q99440 93 aa16.7■□□□□ 0.26
LYSMD2-202ENST00000454181 CRXO43186 299 aaPredicted RBP16.69■□□□□ 0.26
LYSMD2-202ENST00000454181 RHOBP62745 196 aa16.69■□□□□ 0.26
LYSMD2-202ENST00000454181 BAP18Q8IXM2 172 aa16.69■□□□□ 0.26
LYSMD2-202ENST00000454181 RNF182Q8N6D2 247 aa16.69■□□□□ 0.26
LYSMD2-202ENST00000454181 FABP12A6NFH5 140 aa16.68■□□□□ 0.26
LYSMD2-202ENST00000454181 BOLA2-SMG1P6H3BVE0 249 aa16.68■□□□□ 0.26
LYSMD2-202ENST00000454181 SYNGR2O43760 224 aa16.68■□□□□ 0.26
LYSMD2-202ENST00000454181 RAP2BP61225 183 aa16.68■□□□□ 0.26
LYSMD2-202ENST00000454181 SPANXN5Q5MJ07 72 aa16.68■□□□□ 0.26
LYSMD2-202ENST00000454181 ZNRF2Q8NHG8 242 aa16.68■□□□□ 0.26
LYSMD2-202ENST00000454181 C17orf77Q96MU5 243 aa16.68■□□□□ 0.26
LYSMD2-202ENST00000454181 MRPS26Q9BYN8 205 aaKnown RBP16.68■□□□□ 0.26
LYSMD2-202ENST00000454181 CCDC59Q9P031 241 aaKnown RBP16.68■□□□□ 0.26
LYSMD2-202ENST00000454181 TRAV12-2A0A075B6T6 113 aa16.67■□□□□ 0.26
LYSMD2-202ENST00000454181 CBY3A6NI87 242 aa16.67■□□□□ 0.26
LYSMD2-202ENST00000454181 CDK2AP2O75956 126 aa16.67■□□□□ 0.26
LYSMD2-202ENST00000454181 CLINT1Q14677 625 aa16.67■□□□□ 0.26
LYSMD2-202ENST00000454181 FCN2Q15485 313 aa16.67■□□□□ 0.26
LYSMD2-202ENST00000454181 SLC25A39Q9BZJ4 359 aaPredicted RBP16.67■□□□□ 0.26
LYSMD2-202ENST00000454181 TRAV8-2A0A0B4J237 113 aa16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 SMCO3A2RU48 225 aa16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 IL5P05113 134 aa16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 HTN1P15515 57 aa16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 RPL7P18124 248 aaKnown RBP16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 AZU1P20160 251 aa16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 HIST1H1AQ02539 215 aaPredicted RBP16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 TMEM182Q6ZP80 229 aaPredicted RBP16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 TMEM256Q8N2U0 113 aa16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 LRTM2Q8N967 370 aa16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 LRRC20Q8TCA0 184 aa16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 STRAPQ9Y3F4 350 aaKnown RBP16.66■□□□□ 0.26
LYSMD2-202ENST00000454181 ABCA13Q86UQ4 5058 aa16.65■□□□□ 0.26
LYSMD2-202ENST00000454181 AP3S2P59780 193 aa16.65■□□□□ 0.26
LYSMD2-202ENST00000454181 S100A7AQ86SG5 101 aa16.65■□□□□ 0.26
LYSMD2-202ENST00000454181 MAPKAPK5-AS1Q8N8E1 139 aa16.65■□□□□ 0.26
LYSMD2-202ENST00000454181 DYNC2LI1Q8TCX1 351 aa16.65■□□□□ 0.26
LYSMD2-202ENST00000454181 RAB2BQ8WUD1 216 aa16.65■□□□□ 0.26
LYSMD2-202ENST00000454181 HIGD1AQ9Y241 93 aa16.65■□□□□ 0.26
LYSMD2-202ENST00000454181 PRSS46E5RG02 174 aa16.64■□□□□ 0.25
LYSMD2-202ENST00000454181 H3BP45 60 aa16.64■□□□□ 0.25
LYSMD2-202ENST00000454181 HYPMO75409 117 aa16.64■□□□□ 0.25
LYSMD2-202ENST00000454181 TAS2R60P59551 318 aa16.64■□□□□ 0.25
LYSMD2-202ENST00000454181 ACOT7LQ6ZUV0 252 aa16.64■□□□□ 0.25
LYSMD2-202ENST00000454181 SHANK2-AS3Q9BTD1 123 aa16.64■□□□□ 0.25
LYSMD2-202ENST00000454181 H3BRN7 92 aa16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 HOXB5P09067 269 aa16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 OR5G3P0C626 314 aa16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 TNFSF8P32971 234 aa16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 CYP2G1PQ6ZSU1 146 aa16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 TMEM144Q7Z5S9 345 aa16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 OR8A1Q8NGG7 326 aa16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 C16orf74Q96GX8 76 aa16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 LINC00588Q9Y4M8 146 aa16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 TIMM8BQ9Y5J9 83 aaPredicted RBP16.63■□□□□ 0.25
LYSMD2-202ENST00000454181 TOMM5Q8N4H5 51 aa16.62■□□□□ 0.25
LYSMD2-202ENST00000454181 SLC25A21Q9BQT8 299 aaPredicted RBP16.62■□□□□ 0.25
LYSMD2-202ENST00000454181 PLAC8L1A1L4L8 177 aa16.61■□□□□ 0.25
LYSMD2-202ENST00000454181 NOL3O60936 208 aaKnown RBP16.61■□□□□ 0.25
LYSMD2-202ENST00000454181 SFT2D2O95562 160 aa16.61■□□□□ 0.25
LYSMD2-202ENST00000454181 SSX7Q7RTT5 188 aa16.61■□□□□ 0.25
LYSMD2-202ENST00000454181 RNF141Q8WVD5 230 aa16.61■□□□□ 0.25
LYSMD2-202ENST00000454181 SOSTQ9BQB4 213 aa16.61■□□□□ 0.25
LYSMD2-202ENST00000454181 TMBIM6P55061 237 aa16.6■□□□□ 0.25
LYSMD2-202ENST00000454181 SELENOTP62341 195 aa16.6■□□□□ 0.25
LYSMD2-202ENST00000454181 PSG3Q16557 428 aa16.6■□□□□ 0.25
LYSMD2-202ENST00000454181 PYDC2Q56P42 97 aa16.6■□□□□ 0.25
LYSMD2-202ENST00000454181 ZNF493Q6ZR52 646 aa16.6■□□□□ 0.25
LYSMD2-202ENST00000454181 BCL7BQ9BQE9 202 aa16.6■□□□□ 0.25
LYSMD2-202ENST00000454181 RNF24Q9Y225 148 aa16.6■□□□□ 0.25
LYSMD2-202ENST00000454181 LINC00869P0C866 280 aa16.59■□□□□ 0.25
LYSMD2-202ENST00000454181 CXCL3P19876 107 aa16.59■□□□□ 0.25
LYSMD2-202ENST00000454181 ANXA7P20073 488 aaKnown RBP16.59■□□□□ 0.25
LYSMD2-202ENST00000454181 PPP1R1AQ13522 171 aa16.59■□□□□ 0.25
LYSMD2-202ENST00000454181 OR5I1Q13606 314 aa16.59■□□□□ 0.25
LYSMD2-202ENST00000454181 OR10J6PQ8NGY7 276 aa16.59■□□□□ 0.25
LYSMD2-202ENST00000454181 MCFD2Q8NI22 146 aa16.59■□□□□ 0.25
LYSMD2-202ENST00000454181 Q9H8V8 135 aa16.59■□□□□ 0.25
LYSMD2-202ENST00000454181 NOP10Q9NPE3 64 aaKnown RBP16.59■□□□□ 0.25
LYSMD2-202ENST00000454181 CDKN1BP46527 198 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms