RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 KIR2DL5BQ8NHK3 375 aa14.72□□□□□ -0.05
COL9A3-202ENST00000452372 SCRT1Q9BWW7 348 aa14.72□□□□□ -0.05
COL9A3-202ENST00000452372 RPL35AP18077 110 aaKnown RBP14.71□□□□□ -0.05
COL9A3-202ENST00000452372 FGF7P21781 194 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 RPL12P30050 165 aaKnown RBP14.71□□□□□ -0.05
COL9A3-202ENST00000452372 RPL29P47914 159 aaKnown RBP14.71□□□□□ -0.05
COL9A3-202ENST00000452372 SNRPD3P62318 126 aaKnown RBP14.71□□□□□ -0.05
COL9A3-202ENST00000452372 PRR20EP86478 221 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 PRR20CP86479 221 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 PRR20DP86480 221 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 PRR20BP86481 221 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 PRR20AP86496 221 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 MIC13Q5XKP0 118 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 Q6ZRG5 221 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 THAP6Q8TBB0 222 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 ASB13Q8WXK3 278 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 UHRF2Q96PU4 802 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 HSPB11Q9Y547 144 aa14.71□□□□□ -0.05
COL9A3-202ENST00000452372 AGRNO00468 2067 aa14.7□□□□□ -0.06
COL9A3-202ENST00000452372 ELOA3CA0A087WX78 387 aaPredicted RBP14.7□□□□□ -0.06
COL9A3-202ENST00000452372 CLINT1Q14677 625 aa14.7□□□□□ -0.06
COL9A3-202ENST00000452372 OPCMLQ14982 345 aa14.7□□□□□ -0.06
COL9A3-202ENST00000452372 PSMG4Q5JS54 123 aa14.7□□□□□ -0.06
COL9A3-202ENST00000452372 TMEM37Q8WXS4 190 aa14.7□□□□□ -0.06
COL9A3-202ENST00000452372 RSG1Q9BU20 258 aa14.7□□□□□ -0.06
COL9A3-202ENST00000452372 DNAJC4Q9NNZ3 241 aa14.7□□□□□ -0.06
COL9A3-202ENST00000452372 RNF24Q9Y225 148 aa14.7□□□□□ -0.06
COL9A3-202ENST00000452372 UBE2CO00762 179 aa14.69□□□□□ -0.06
COL9A3-202ENST00000452372 GIPP09681 153 aaPredicted RBP14.69□□□□□ -0.06
COL9A3-202ENST00000452372 RPL7P18124 248 aaKnown RBP14.69□□□□□ -0.06
COL9A3-202ENST00000452372 MEOX2P50222 304 aa14.69□□□□□ -0.06
COL9A3-202ENST00000452372 SAMD13Q5VXD3 122 aa14.69□□□□□ -0.06
COL9A3-202ENST00000452372 LINC00305Q7Z4B0 112 aa14.69□□□□□ -0.06
COL9A3-202ENST00000452372 C17orf77Q96MU5 243 aa14.69□□□□□ -0.06
COL9A3-202ENST00000452372 EDA2RQ9HAV5 297 aa14.69□□□□□ -0.06
COL9A3-202ENST00000452372 SLC39A9Q9NUM3 307 aa14.69□□□□□ -0.06
COL9A3-202ENST00000452372 SOCS3O14543 225 aa14.68□□□□□ -0.06
COL9A3-202ENST00000452372 COX7A2P2O60397 106 aa14.68□□□□□ -0.06
COL9A3-202ENST00000452372 ID1P41134 155 aa14.68□□□□□ -0.06
COL9A3-202ENST00000452372 FGL1Q08830 312 aa14.68□□□□□ -0.06
COL9A3-202ENST00000452372 C10orf113Q5VZT2 155 aa14.68□□□□□ -0.06
COL9A3-202ENST00000452372 NPCDR1Q9BY65 106 aa14.68□□□□□ -0.06
COL9A3-202ENST00000452372 RETNQ9HD89 108 aa14.68□□□□□ -0.06
COL9A3-202ENST00000452372 ISLRO14498 428 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 PSMB3P49720 205 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 B2MP61769 119 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 Q6ZWC4 215 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 STHQ8IWL8 128 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 OR1L4Q8NGR5 311 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 PFDN5Q99471 154 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 ATP5SQ99766 215 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 WDR61Q9GZS3 305 aaKnown RBP14.67□□□□□ -0.06
COL9A3-202ENST00000452372 CSTL1Q9H114 145 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 PXMP4Q9Y6I8 212 aa14.67□□□□□ -0.06
COL9A3-202ENST00000452372 KNCNA6PVL3 124 aa14.65□□□□□ -0.06
COL9A3-202ENST00000452372 ATF4P18848 351 aaPredicted RBP14.65□□□□□ -0.06
COL9A3-202ENST00000452372 Q5BKY6 102 aa14.65□□□□□ -0.06
COL9A3-202ENST00000452372 ACTL10Q5JWF8 245 aa14.65□□□□□ -0.06
COL9A3-202ENST00000452372 TRPT1Q86TN4 253 aaKnown RBP14.65□□□□□ -0.06
COL9A3-202ENST00000452372 C16orf92Q96LL3 132 aa14.65□□□□□ -0.06
COL9A3-202ENST00000452372 LINC00052Q96N35 136 aa14.65□□□□□ -0.06
COL9A3-202ENST00000452372 OVOL2Q9BRP0 275 aa14.65□□□□□ -0.06
COL9A3-202ENST00000452372 MRPS12O15235 138 aaKnown RBP14.64□□□□□ -0.07
COL9A3-202ENST00000452372 ZNF709Q8N972 641 aa14.64□□□□□ -0.07
COL9A3-202ENST00000452372 GATAD1Q8WUU5 269 aa14.64□□□□□ -0.07
COL9A3-202ENST00000452372 SMIM3Q9BZL3 60 aa14.64□□□□□ -0.07
COL9A3-202ENST00000452372 TP53TG1Q9Y2A0 90 aa14.64□□□□□ -0.07
COL9A3-202ENST00000452372 A0A087X0K7 114 aa14.63□□□□□ -0.07
COL9A3-202ENST00000452372 MORN5Q5VZ52 161 aa14.63□□□□□ -0.07
COL9A3-202ENST00000452372 BPIFA4PQ86YQ2 179 aa14.63□□□□□ -0.07
COL9A3-202ENST00000452372 RNF183Q96D59 192 aa14.63□□□□□ -0.07
COL9A3-202ENST00000452372 C17orf112F2Z3M2 114 aa14.62□□□□□ -0.07
COL9A3-202ENST00000452372 SPRY2O43597 315 aa14.62□□□□□ -0.07
COL9A3-202ENST00000452372 IFNA5P01569 189 aa14.62□□□□□ -0.07
COL9A3-202ENST00000452372 DEFB135Q30KP9 77 aa14.62□□□□□ -0.07
COL9A3-202ENST00000452372 ZFAND6Q6FIF0 208 aa14.62□□□□□ -0.07
COL9A3-202ENST00000452372 OR2T35Q8NGX2 323 aa14.62□□□□□ -0.07
COL9A3-202ENST00000452372 AQP10Q96PS8 301 aa14.62□□□□□ -0.07
COL9A3-202ENST00000452372 WFDC1Q9HC57 220 aa14.62□□□□□ -0.07
COL9A3-202ENST00000452372 KCNIP2Q9NS61 270 aa14.62□□□□□ -0.07
COL9A3-202ENST00000452372 H3BMM0 161 aa14.61□□□□□ -0.07
COL9A3-202ENST00000452372 HLA-DRB4P13762 266 aa14.61□□□□□ -0.07
COL9A3-202ENST00000452372 MORN3Q6PF18 240 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-202ENST00000452372 FOXI2Q6ZQN5 318 aa14.61□□□□□ -0.07
COL9A3-202ENST00000452372 SCGB1C1Q8TD33 95 aa14.61□□□□□ -0.07
COL9A3-202ENST00000452372 PARD6GQ9BYG4 376 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-202ENST00000452372 SAV1Q9H4B6 383 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-202ENST00000452372 HLA-DRB4X5D2U9 266 aa14.61□□□□□ -0.07
COL9A3-202ENST00000452372 HYDINQ4G0P3 5121 aa14.61□□□□□ -0.07
COL9A3-202ENST00000452372 TRAV8-2A0A0B4J237 113 aa14.6□□□□□ -0.07
COL9A3-202ENST00000452372 TRAV5A0A0B4J249 113 aa14.6□□□□□ -0.07
COL9A3-202ENST00000452372 CA1P00915 261 aaPredicted RBP14.6□□□□□ -0.07
COL9A3-202ENST00000452372 SPP1P10451 314 aa14.6□□□□□ -0.07
COL9A3-202ENST00000452372 GCSAMLQ5JQS6 135 aa14.6□□□□□ -0.07
COL9A3-202ENST00000452372 C20orf173Q96LM9 149 aa14.6□□□□□ -0.07
COL9A3-202ENST00000452372 RPRMQ9NS64 109 aa14.6□□□□□ -0.07
COL9A3-202ENST00000452372 EPPK1P58107 5090 aaKnown RBP14.59□□□□□ -0.07
COL9A3-202ENST00000452372 LCE6AA0A183 80 aa14.59□□□□□ -0.07
COL9A3-202ENST00000452372 GIG44P09565 113 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms