RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 DEFB131AP59861 70 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 ZNF124Q15973 351 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 MIC13Q5XKP0 118 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 THAP6Q8TBB0 222 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 TMEM37Q8WXS4 190 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 UHRF2Q96PU4 802 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 ATP5SQ99766 215 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 NPCDR1Q9BY65 106 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 ZMAT4Q9H898 229 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 DOK5Q9P104 306 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 UBE2CO00762 179 aa10.59□□□□□ -0.71
COL3A1-203ENST00000450867 ISLRO14498 428 aa10.59□□□□□ -0.71
COL3A1-203ENST00000450867 MRPS12O15235 138 aaKnown RBP10.59□□□□□ -0.71
COL3A1-203ENST00000450867 RPL7P18124 248 aaKnown RBP10.59□□□□□ -0.71
COL3A1-203ENST00000450867 PSMB3P49720 205 aa10.59□□□□□ -0.71
COL3A1-203ENST00000450867 APOC4P55056 127 aa10.59□□□□□ -0.71
COL3A1-203ENST00000450867 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
COL3A1-203ENST00000450867 CLINT1Q14677 625 aa10.59□□□□□ -0.71
COL3A1-203ENST00000450867 RCHY1Q96PM5 261 aa10.59□□□□□ -0.71
COL3A1-203ENST00000450867 AQP10Q96PS8 301 aa10.59□□□□□ -0.71
COL3A1-203ENST00000450867 PARD6GQ9BYG4 376 aaPredicted RBP10.59□□□□□ -0.71
COL3A1-203ENST00000450867 WDR61Q9GZS3 305 aaKnown RBP10.59□□□□□ -0.71
COL3A1-203ENST00000450867 SLC25A22Q9H936 323 aa10.59□□□□□ -0.71
COL3A1-203ENST00000450867 SLC39A9Q9NUM3 307 aa10.59□□□□□ -0.71
COL3A1-203ENST00000450867 A0A087X0K7 114 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 COX7A2P2O60397 106 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 B2MP61769 119 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 C10orf113Q5VZT2 155 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 LEMD1Q68G75 181 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 Q6ZRG5 221 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 Q6ZWC4 215 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 LINC00305Q7Z4B0 112 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 OR1L4Q8NGR5 311 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 PFDN5Q99471 154 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 DNAJC4Q9NNZ3 241 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 KCNIP2Q9NS61 270 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 PXMP4Q9Y6I8 212 aa10.58□□□□□ -0.72
COL3A1-203ENST00000450867 G3V3Q6 166 aa10.57□□□□□ -0.72
COL3A1-203ENST00000450867 Q5BKY6 102 aa10.57□□□□□ -0.72
COL3A1-203ENST00000450867 PSMG4Q5JS54 123 aa10.57□□□□□ -0.72
COL3A1-203ENST00000450867 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.57□□□□□ -0.72
COL3A1-203ENST00000450867 TRPT1Q86TN4 253 aaKnown RBP10.57□□□□□ -0.72
COL3A1-203ENST00000450867 GATAD1Q8WUU5 269 aa10.57□□□□□ -0.72
COL3A1-203ENST00000450867 TP53TG1Q9Y2A0 90 aa10.57□□□□□ -0.72
COL3A1-203ENST00000450867 ID1P41134 155 aa10.56□□□□□ -0.72
COL3A1-203ENST00000450867 RSG1Q9BU20 258 aa10.56□□□□□ -0.72
COL3A1-203ENST00000450867 CXCL2P19875 107 aa10.55□□□□□ -0.72
COL3A1-203ENST00000450867 MORN5Q5VZ52 161 aa10.55□□□□□ -0.72
COL3A1-203ENST00000450867 BPIFA4PQ86YQ2 179 aa10.55□□□□□ -0.72
COL3A1-203ENST00000450867 OR2T35Q8NGX2 323 aa10.55□□□□□ -0.72
COL3A1-203ENST00000450867 CLUHP3Q96NS8 147 aa10.55□□□□□ -0.72
COL3A1-203ENST00000450867 OVOL2Q9BRP0 275 aa10.55□□□□□ -0.72
COL3A1-203ENST00000450867 WFDC1Q9HC57 220 aa10.55□□□□□ -0.72
COL3A1-203ENST00000450867 TNFSF18Q9UNG2 199 aa10.55□□□□□ -0.72
COL3A1-203ENST00000450867 C17orf112F2Z3M2 114 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 IFNA5P01569 189 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 HLA-DRB4P13762 266 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
COL3A1-203ENST00000450867 ATF4P18848 351 aaPredicted RBP10.54□□□□□ -0.72
COL3A1-203ENST00000450867 SPATA31B1PQ5VZV4 182 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 FOXI2Q6ZQN5 318 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 STHQ8IWL8 128 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 ZNF709Q8N972 641 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 WWC2-AS2Q96NR7 200 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 CSTL1Q9H114 145 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 HLA-DRB4X5D2U9 266 aa10.54□□□□□ -0.72
COL3A1-203ENST00000450867 TRAV8-2A0A0B4J237 113 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 RNF222A6NCQ9 220 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 KNCNA6PVL3 124 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 A8MTW9 85 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 H3BMM0 161 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 IGLC2P0DOY2 106 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 SPP1P10451 314 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 TMEM41BQ5BJD5 291 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 MORN3Q6PF18 240 aaPredicted RBP10.53□□□□□ -0.72
COL3A1-203ENST00000450867 LCN15Q6UWW0 184 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 RNF183Q96D59 192 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 C16orf92Q96LL3 132 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 SMIM3Q9BZL3 60 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 HRH4Q9H3N8 390 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 SAV1Q9H4B6 383 aaPredicted RBP10.53□□□□□ -0.72
COL3A1-203ENST00000450867 EDA2RQ9HAV5 297 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 RETNQ9HD89 108 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 TMEM14CQ9P0S9 112 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 TIMM9Q9Y5J7 89 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 CSMD3Q7Z407 3707 aa10.53□□□□□ -0.72
COL3A1-203ENST00000450867 GIG44P09565 113 aaPredicted RBP10.52□□□□□ -0.73
COL3A1-203ENST00000450867 ZNF266Q14584 549 aa10.52□□□□□ -0.73
COL3A1-203ENST00000450867 GCSAMLQ5JQS6 135 aa10.52□□□□□ -0.73
COL3A1-203ENST00000450867 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.73
COL3A1-203ENST00000450867 C20orf173Q96LM9 149 aa10.52□□□□□ -0.73
COL3A1-203ENST00000450867 RPRMQ9NS64 109 aa10.52□□□□□ -0.73
COL3A1-203ENST00000450867 A0A0J9YX75 114 aa10.51□□□□□ -0.73
COL3A1-203ENST00000450867 GUK1Q16774 197 aa10.51□□□□□ -0.73
COL3A1-203ENST00000450867 DEFB135Q30KP9 77 aa10.51□□□□□ -0.73
COL3A1-203ENST00000450867 GDF5OSQ5U4N7 250 aa10.51□□□□□ -0.73
COL3A1-203ENST00000450867 Q6ZNX1 250 aa10.51□□□□□ -0.73
COL3A1-203ENST00000450867 INO80EQ8NBZ0 244 aaPredicted RBP10.51□□□□□ -0.73
COL3A1-203ENST00000450867 SCGB1C1Q8TD33 95 aa10.51□□□□□ -0.73
COL3A1-203ENST00000450867 SAT2Q96F10 170 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms