RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CDKN1BP46527 198 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 PSG3Q16557 428 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 ECSCRQ19T08 205 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 ORMDL3Q8N138 153 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 TPSG1Q9NRR2 321 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 MYO9AB2RTY4 2548 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 TMEM265A0A087WTH1 108 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 K7ERJ3 54 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 HTN1P15515 57 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 LEPP41159 167 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 PSMB2P49721 201 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 MEF2CQ06413 473 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-204ENST00000449510 RABAC1Q9UI14 185 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 SMIM27A0A1W2PRY6 76 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 K7EP13 123 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 CD5LO43866 347 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 RBX1P62877 108 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 Q6ZSR3 168 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 PRR20EP86478 221 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 PRR20CP86479 221 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 PRR20DP86480 221 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 PRR20BP86481 221 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 PRR20AP86496 221 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 LYZL1Q6UWQ5 148 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 AMTNQ6UX39 209 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 MAP1LC3AQ9H492 121 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 PSG8Q9UQ74 426 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 LY96Q9Y6Y9 160 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 CACNA1AO00555 2505 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 IGKV2-40A0A087WW87 121 aaPredicted RBP10.04□□□□□ -0.8
UBE3B-204ENST00000449510 TRGV8A0A0C4DH27 118 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 C15orf65H3BRN8 121 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 IGKV2D-40P01614 121 aaPredicted RBP10.04□□□□□ -0.8
UBE3B-204ENST00000449510 SLC25A2Q9BXI2 301 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 TMEM14BQ9NUH8 114 aa10.04□□□□□ -0.8
UBE3B-204ENST00000449510 GLRXP35754 106 aa10.03□□□□□ -0.8
UBE3B-204ENST00000449510 WT1-ASQ06250 92 aa10.03□□□□□ -0.8
UBE3B-204ENST00000449510 RNF138Q8WVD3 245 aa10.03□□□□□ -0.8
UBE3B-204ENST00000449510 BEX4Q9NWD9 120 aaPredicted RBP10.03□□□□□ -0.8
UBE3B-204ENST00000449510 TRIP6Q15654 476 aaKnown RBP10.03□□□□□ -0.8
UBE3B-204ENST00000449510 ETDBQ3ZM63 59 aa10.03□□□□□ -0.8
UBE3B-204ENST00000449510 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
UBE3B-204ENST00000449510 C11orf53Q8IXP5 236 aa10.03□□□□□ -0.8
UBE3B-204ENST00000449510 OR4A5Q8NH83 315 aa10.03□□□□□ -0.8
UBE3B-204ENST00000449510 C11orf52Q96A22 123 aa10.03□□□□□ -0.8
UBE3B-204ENST00000449510 NEUROG1Q92886 237 aa10.03□□□□□ -0.8
UBE3B-204ENST00000449510 CHCHD1Q96BP2 118 aaKnown RBP10.03□□□□□ -0.8
UBE3B-204ENST00000449510 FMC1Q96HJ9 113 aa10.03□□□□□ -0.8
UBE3B-204ENST00000449510 LOC105371242A0A075B767 164 aa10.02□□□□□ -0.8
UBE3B-204ENST00000449510 PPIAL4CA0A0B4J2A2 164 aa10.02□□□□□ -0.8
UBE3B-204ENST00000449510 NTN3O00634 580 aaPredicted RBP10.02□□□□□ -0.8
UBE3B-204ENST00000449510 PPIAL4GP0DN37 164 aa10.02□□□□□ -0.8
UBE3B-204ENST00000449510 CNTFRP26992 372 aa10.02□□□□□ -0.8
UBE3B-204ENST00000449510 GDF5OSQ5U4N7 250 aa10.02□□□□□ -0.8
UBE3B-204ENST00000449510 PCP2Q8IVA1 136 aa10.02□□□□□ -0.8
UBE3B-204ENST00000449510 C17orf77Q96MU5 243 aa10.02□□□□□ -0.8
UBE3B-204ENST00000449510 TAX1BP3O14907 124 aa10.02□□□□□ -0.81
UBE3B-204ENST00000449510 RPRMLQ8N4K4 120 aa10.02□□□□□ -0.81
UBE3B-204ENST00000449510 FAM208BQ5VWN6 2430 aa10.02□□□□□ -0.81
UBE3B-204ENST00000449510 FAM90A27PA6NNH2 459 aa10.02□□□□□ -0.81
UBE3B-204ENST00000449510 M0R381 172 aa10.02□□□□□ -0.81
UBE3B-204ENST00000449510 NGBQ9NPG2 151 aa10.02□□□□□ -0.81
UBE3B-204ENST00000449510 KMT2EQ8IZD2 1858 aa10.02□□□□□ -0.81
UBE3B-204ENST00000449510 C19orf67A6NJJ6 358 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 E7EUB6 86 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 GFRALQ6UXV0 394 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 UBALD2Q8IYN6 164 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 DEFB123Q8N688 67 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 TMEM133Q9H2Q1 129 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 HBDP02042 147 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 MC5RP33032 325 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 OR5AN1Q8NGI8 311 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 MRPL16Q9NX20 251 aaKnown RBP10.01□□□□□ -0.81
UBE3B-204ENST00000449510 NUP210LQ5VU65 1888 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 ESDP10768 282 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 SEC11AP67812 179 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 ANKRD39Q53RE8 183 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 SIGMAR1Q99720 223 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 VKORC1Q9BQB6 163 aa10.01□□□□□ -0.81
UBE3B-204ENST00000449510 A0A1W2PPI3 338 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 TMEM238C9JI98 176 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 IGHV1-46P01743 117 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 PAX2Q02962 417 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 ZC2HC1BQ5TFG8 222 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 TMEM131Q92545 1883 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 C16orf97H3BN30 126 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 J3QW42 95 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 JMJD8Q96S16 334 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 CHODLQ9H9P2 273 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 MRPL36Q9P0J6 103 aaKnown RBP10□□□□□ -0.81
UBE3B-204ENST00000449510 TMEM75Q8N9X5 138 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 PRR7Q8TB68 274 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 ZNF503Q96F45 646 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 C1RLQ9NZP8 487 aa10□□□□□ -0.81
UBE3B-204ENST00000449510 EMP1P54849 157 aa9.99□□□□□ -0.81
UBE3B-204ENST00000449510 C17orf58Q2M2W7 97 aa9.99□□□□□ -0.81
UBE3B-204ENST00000449510 C1orf229Q6ZS94 237 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-204ENST00000449510 ATP5L2Q7Z4Y8 100 aa9.99□□□□□ -0.81
UBE3B-204ENST00000449510 DEFB125Q8N687 156 aa9.99□□□□□ -0.81
UBE3B-204ENST00000449510 SLC25A39Q9BZJ4 359 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms