RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 DEFB1P60022 68 aa18.33■□□□□ 0.52
HTATSF1-203ENST00000448450 SHANK2-AS3Q9BTD1 123 aa18.33■□□□□ 0.52
HTATSF1-203ENST00000448450 E5RGE8 158 aa18.32■□□□□ 0.52
HTATSF1-203ENST00000448450 CAMLGP49069 296 aa18.32■□□□□ 0.52
HTATSF1-203ENST00000448450 HBG1P69891 147 aa18.32■□□□□ 0.52
HTATSF1-203ENST00000448450 HBG2P69892 147 aa18.32■□□□□ 0.52
HTATSF1-203ENST00000448450 ALG5Q9Y673 324 aa18.32■□□□□ 0.52
HTATSF1-203ENST00000448450 UBE2L5PA0A1B0GUS4 154 aa18.31■□□□□ 0.52
HTATSF1-203ENST00000448450 SOCS3O14543 225 aa18.31■□□□□ 0.52
HTATSF1-203ENST00000448450 PTTG1O95997 202 aa18.31■□□□□ 0.52
HTATSF1-203ENST00000448450 NHLH2Q02577 135 aa18.31■□□□□ 0.52
HTATSF1-203ENST00000448450 RAB31Q13636 194 aa18.31■□□□□ 0.52
HTATSF1-203ENST00000448450 PPP1R1CQ8WVI7 109 aa18.31■□□□□ 0.52
HTATSF1-203ENST00000448450 ARV1Q9H2C2 271 aa18.31■□□□□ 0.52
HTATSF1-203ENST00000448450 WDR83OSQ9Y284 106 aa18.31■□□□□ 0.52
HTATSF1-203ENST00000448450 A0A0J9YWU9 116 aa18.3■□□□□ 0.52
HTATSF1-203ENST00000448450 PSMB3P49720 205 aa18.3■□□□□ 0.52
HTATSF1-203ENST00000448450 BAXQ07812 192 aa18.3■□□□□ 0.52
HTATSF1-203ENST00000448450 FGL1Q08830 312 aa18.3■□□□□ 0.52
HTATSF1-203ENST00000448450 VWC2Q2TAL6 325 aa18.3■□□□□ 0.52
HTATSF1-203ENST00000448450 MIC13Q5XKP0 118 aa18.3■□□□□ 0.52
HTATSF1-203ENST00000448450 C16orf92Q96LL3 132 aa18.3■□□□□ 0.52
HTATSF1-203ENST00000448450 C17orf77Q96MU5 243 aa18.3■□□□□ 0.52
HTATSF1-203ENST00000448450 GPR82Q96P67 336 aa18.3■□□□□ 0.52
HTATSF1-203ENST00000448450 EWSR1Q01844 656 aaKnown RBP eCLIP18.29■□□□□ 0.52
HTATSF1-203ENST00000448450 ATP6V1FQ16864 119 aa18.29■□□□□ 0.52
HTATSF1-203ENST00000448450 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.29■□□□□ 0.52
HTATSF1-203ENST00000448450 RARRES2Q99969 163 aa18.29■□□□□ 0.52
HTATSF1-203ENST00000448450 SLC25A31Q9H0C2 315 aa18.29■□□□□ 0.52
HTATSF1-203ENST00000448450 H3BMM0 161 aa18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 ISLRO14498 428 aa18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 COX7A2P2O60397 106 aa18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 GIG44P09565 113 aaPredicted RBP18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 ATF4P18848 351 aaPredicted RBP18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 MEOX2P50222 304 aa18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 PXDC1Q5TGL8 231 aa18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 GDF5OSQ5U4N7 250 aa18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 MORN3Q6PF18 240 aaPredicted RBP18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 S100A7AQ86SG5 101 aa18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 OR11H2Q8NH07 326 aa18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 GATAD1Q8WUU5 269 aa18.28■□□□□ 0.52
HTATSF1-203ENST00000448450 IGKV3-20P01619 116 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 SPP1P10451 314 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 RPL7P18124 248 aaKnown RBP18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 C4BPBP20851 252 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 FGF7P21781 194 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 IGFL4Q6B9Z1 124 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 LINC00305Q7Z4B0 112 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 OR5C1Q8NGR4 320 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 LINC00476Q8WZB0 136 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 C20orf173Q96LM9 149 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 RNF126Q9BV68 326 aa18.27■□□□□ 0.52
HTATSF1-203ENST00000448450 MPC2O95563 127 aa18.26■□□□□ 0.51
HTATSF1-203ENST00000448450 Q6ZRG5 221 aa18.26■□□□□ 0.51
HTATSF1-203ENST00000448450 TMEM37Q8WXS4 190 aa18.26■□□□□ 0.51
HTATSF1-203ENST00000448450 CLEC5AQ9NY25 188 aa18.26■□□□□ 0.51
HTATSF1-203ENST00000448450 F6UB75 175 aa18.25■□□□□ 0.51
HTATSF1-203ENST00000448450 HLA-DRB4P13762 266 aa18.25■□□□□ 0.51
HTATSF1-203ENST00000448450 SAMD13Q5VXD3 122 aa18.25■□□□□ 0.51
HTATSF1-203ENST00000448450 C10orf113Q5VZT2 155 aa18.25■□□□□ 0.51
HTATSF1-203ENST00000448450 DNAJC4Q9NNZ3 241 aa18.25■□□□□ 0.51
HTATSF1-203ENST00000448450 HLA-DRB4X5D2U9 266 aa18.25■□□□□ 0.51
HTATSF1-203ENST00000448450 CXCL3P19876 107 aa18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 PRR20EP86478 221 aa18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 PRR20CP86479 221 aa18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 PRR20DP86480 221 aa18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 PRR20BP86481 221 aa18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 PRR20AP86496 221 aa18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 CLINT1Q14677 625 aa18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 OPCMLQ14982 345 aa18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 THAP6Q8TBB0 222 aa18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 SAV1Q9H4B6 383 aaPredicted RBP18.24■□□□□ 0.51
HTATSF1-203ENST00000448450 ELOA3CA0A087WX78 387 aaPredicted RBP18.23■□□□□ 0.51
HTATSF1-203ENST00000448450 SNRPCP09234 159 aaKnown RBP18.23■□□□□ 0.51
HTATSF1-203ENST00000448450 RPL29P47914 159 aaKnown RBP18.23■□□□□ 0.51
HTATSF1-203ENST00000448450 MORN5Q5VZ52 161 aa18.23■□□□□ 0.51
HTATSF1-203ENST00000448450 FOXI2Q6ZQN5 318 aa18.23■□□□□ 0.51
HTATSF1-203ENST00000448450 OR4B1Q8NGF8 309 aa18.23■□□□□ 0.51
HTATSF1-203ENST00000448450 RPRMQ9NS64 109 aa18.23■□□□□ 0.51
HTATSF1-203ENST00000448450 SLC39A9Q9NUM3 307 aa18.23■□□□□ 0.51
HTATSF1-203ENST00000448450 TRAV8-2A0A0B4J237 113 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 FXYD7P58549 80 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 B2MP61769 119 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 EBLN2Q6P2I7 272 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 RNF182Q8N6D2 247 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 MED28Q9H204 178 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 MBD2Q9UBB5 411 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 XCL2Q9UBD3 114 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 RNF24Q9Y225 148 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 PXMP4Q9Y6I8 212 aa18.22■□□□□ 0.51
HTATSF1-203ENST00000448450 FRAS1Q86XX4 4008 aa18.21■□□□□ 0.51
HTATSF1-203ENST00000448450 LY6G6CO95867 125 aa18.21■□□□□ 0.51
HTATSF1-203ENST00000448450 PET100P0DJ07 73 aa18.21■□□□□ 0.51
HTATSF1-203ENST00000448450 NUTF2P61970 127 aaKnown RBP18.21■□□□□ 0.51
HTATSF1-203ENST00000448450 FCN2Q15485 313 aa18.21■□□□□ 0.51
HTATSF1-203ENST00000448450 TMEM41BQ5BJD5 291 aa18.21■□□□□ 0.51
HTATSF1-203ENST00000448450 OR1L4Q8NGR5 311 aa18.21■□□□□ 0.51
HTATSF1-203ENST00000448450 LRRC20Q8TCA0 184 aa18.21■□□□□ 0.51
HTATSF1-203ENST00000448450 TRAV5A0A0B4J249 113 aa18.2■□□□□ 0.5
HTATSF1-203ENST00000448450 MRPS12O15235 138 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms