RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 FAM231AP0DMU4 169 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 FAM231CP0DMU5 169 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 INPP1P49441 399 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 TRIQKQ629K1 86 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 AMTNQ6UX39 209 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 CYP2G1PQ6ZSU1 146 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 DNAH17Q9UFH2 4485 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 TRAV8-2A0A0B4J237 113 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 LOC102723971A0A1B0GUV8 181 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 LINC00854A0A1B0GVQ3 168 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 NAP1L6A6NFF2 107 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 HBE1P02100 147 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 OR4E1P0C645 316 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 RNF182Q8N6D2 247 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 POM121L12Q8N7R1 296 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 SDHCQ99643 169 aaPredicted RBP12.96□□□□□ -0.33
COL9A1-205ENST00000447041 NIPSNAP3BQ9BS92 247 aa12.96□□□□□ -0.33
COL9A1-205ENST00000447041 SLC25A39Q9BZJ4 359 aaPredicted RBP12.96□□□□□ -0.33
COL9A1-205ENST00000447041 YTHDF2Q9Y5A9 579 aaKnown RBP12.96□□□□□ -0.33
COL9A1-205ENST00000447041 TEX48A0A1B0GUV7 120 aa12.95□□□□□ -0.34
COL9A1-205ENST00000447041 IL5P05113 134 aa12.95□□□□□ -0.34
COL9A1-205ENST00000447041 ANXA7P20073 488 aaKnown RBP12.95□□□□□ -0.34
COL9A1-205ENST00000447041 BTCP35070 178 aa12.95□□□□□ -0.34
COL9A1-205ENST00000447041 CNN1P51911 297 aaKnown RBP12.95□□□□□ -0.34
COL9A1-205ENST00000447041 RRAS2P62070 204 aaPredicted RBP12.95□□□□□ -0.34
COL9A1-205ENST00000447041 FGL1Q08830 312 aa12.95□□□□□ -0.34
COL9A1-205ENST00000447041 GPR82Q96P67 336 aa12.95□□□□□ -0.34
COL9A1-205ENST00000447041 ZNF701M0R085 212 aaPredicted RBP12.94□□□□□ -0.34
COL9A1-205ENST00000447041 M0R2Z0 102 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 IFNA21P01568 189 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 LINC00869P0C866 280 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 HTN3P15516 51 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 SPINK13Q1W4C9 94 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 RRN3P1Q2M238 152 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 OR11H7Q8NGC8 314 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 IGF2BP2-AS1Q96M15 143 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 UHRF2Q96PU4 802 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 SHANK2-AS3Q9BTD1 123 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 HIGD1AQ9Y241 93 aa12.94□□□□□ -0.34
COL9A1-205ENST00000447041 M0R2N4 97 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 SCGB1D2O95969 90 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 PRM2P04554 102 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 METTL15P1P0C7V9 234 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 S100A7P31151 101 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 RAP2BP61225 183 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 C4orf46Q504U0 113 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 TMEM14EPQ6UXP3 125 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 SMIM8Q96KF7 97 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 TMEM208Q9BTX3 173 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 KRTAP17-1Q9BYP8 105 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 KIAA1109Q2LD37 5005 aa12.93□□□□□ -0.34
COL9A1-205ENST00000447041 CRXO43186 299 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-205ENST00000447041 HYPMO75409 117 aa12.92□□□□□ -0.34
COL9A1-205ENST00000447041 OR5G3P0C626 314 aa12.92□□□□□ -0.34
COL9A1-205ENST00000447041 PLP1P60201 277 aa12.92□□□□□ -0.34
COL9A1-205ENST00000447041 DLK1P80370 383 aa12.92□□□□□ -0.34
COL9A1-205ENST00000447041 LINC00336Q6ZUF6 198 aa12.92□□□□□ -0.34
COL9A1-205ENST00000447041 BAP18Q8IXM2 172 aa12.92□□□□□ -0.34
COL9A1-205ENST00000447041 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
COL9A1-205ENST00000447041 DUSP14O95147 198 aaKnown RBP12.91□□□□□ -0.34
COL9A1-205ENST00000447041 INSP01308 110 aa12.91□□□□□ -0.34
COL9A1-205ENST00000447041 PRB4P10163 310 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-205ENST00000447041 RPL7P18124 248 aaKnown RBP12.91□□□□□ -0.34
COL9A1-205ENST00000447041 SLC38A11Q08AI6 406 aa12.91□□□□□ -0.34
COL9A1-205ENST00000447041 OXA1LQ15070 435 aa12.91□□□□□ -0.34
COL9A1-205ENST00000447041 IAH1Q2TAA2 248 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-205ENST00000447041 RCL1Q9Y2P8 373 aaKnown RBP12.91□□□□□ -0.34
COL9A1-205ENST00000447041 TRAV12-2A0A075B6T6 113 aa12.9□□□□□ -0.34
COL9A1-205ENST00000447041 ZNF705GA8MUZ8 300 aaPredicted RBP12.9□□□□□ -0.34
COL9A1-205ENST00000447041 DAD1P61803 113 aa12.9□□□□□ -0.34
COL9A1-205ENST00000447041 SELENOTP62341 195 aa12.9□□□□□ -0.34
COL9A1-205ENST00000447041 PATE2Q6UY27 113 aa12.9□□□□□ -0.34
COL9A1-205ENST00000447041 UBE2DNLQ8IWF7 75 aa12.9□□□□□ -0.34
COL9A1-205ENST00000447041 ZBTB8BQ8NAP8 495 aaPredicted RBP12.9□□□□□ -0.34
COL9A1-205ENST00000447041 FAM210BQ96KR6 192 aa12.9□□□□□ -0.34
COL9A1-205ENST00000447041 ARL6Q9H0F7 186 aa12.9□□□□□ -0.34
COL9A1-205ENST00000447041 PKHD1P08F94 4074 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 A0A087X0K7 114 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 A0A1B0GVY2 172 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 CENPXA8MT69 81 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 RTL8CO15255 209 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 IL7P13232 177 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 ARL16Q0P5N6 197 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 TMEM88Q6PEY1 159 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 OR10P1Q8NGE3 313 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 NPVFQ9HCQ7 196 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 GSKIPQ9P0R6 139 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 MGAT4CQ9UBM8 478 aa12.89□□□□□ -0.35
COL9A1-205ENST00000447041 IGLV2-18A0A075B6J9 118 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 FNDC10F2Z333 226 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 BOLA2-SMG1P6H3BVE0 249 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 K7EPK0 472 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 CCSO14618 274 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 TSC22D2O75157 780 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 CXCL3P19876 107 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 HIST1H1AQ02539 215 aaPredicted RBP12.88□□□□□ -0.35
COL9A1-205ENST00000447041 TEPPQ6URK8 271 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 MITD1Q8WV92 249 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 ARV1Q9H2C2 271 aa12.88□□□□□ -0.35
COL9A1-205ENST00000447041 PKD1P98161 4303 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms