RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 SLC25A22Q9H936 323 aa16.31■□□□□ 0.2
APOE-204ENST00000446996 PXMP4Q9Y6I8 212 aa16.31■□□□□ 0.2
APOE-204ENST00000446996 LOC102724200A0A096LPH7 203 aaPredicted RBP16.3■□□□□ 0.2
APOE-204ENST00000446996 C17orf112F2Z3M2 114 aa16.3■□□□□ 0.2
APOE-204ENST00000446996 SNRPD3P62318 126 aaKnown RBP16.3■□□□□ 0.2
APOE-204ENST00000446996 C10orf113Q5VZT2 155 aa16.3■□□□□ 0.2
APOE-204ENST00000446996 LINC00305Q7Z4B0 112 aa16.3■□□□□ 0.2
APOE-204ENST00000446996 ZNF709Q8N972 641 aa16.3■□□□□ 0.2
APOE-204ENST00000446996 SCRT1Q9BWW7 348 aa16.3■□□□□ 0.2
APOE-204ENST00000446996 ID1P41134 155 aa16.29■□□□□ 0.2
APOE-204ENST00000446996 DEFB131AP59861 70 aa16.29■□□□□ 0.2
APOE-204ENST00000446996 HAGHQ16775 308 aa16.29■□□□□ 0.2
APOE-204ENST00000446996 Q6ZNX1 250 aa16.29■□□□□ 0.2
APOE-204ENST00000446996 FAM24BQ8N5W8 94 aa16.29■□□□□ 0.2
APOE-204ENST00000446996 INO80EQ8NBZ0 244 aaPredicted RBP16.29■□□□□ 0.2
APOE-204ENST00000446996 SCGB1C1Q8TD33 95 aa16.29■□□□□ 0.2
APOE-204ENST00000446996 UHRF2Q96PU4 802 aa16.29■□□□□ 0.2
APOE-204ENST00000446996 TM2D3Q9BRN9 247 aa16.29■□□□□ 0.2
APOE-204ENST00000446996 ASCL2Q99929 193 aa16.28■□□□□ 0.2
APOE-204ENST00000446996 TNFSF18Q9UNG2 199 aa16.28■□□□□ 0.2
APOE-204ENST00000446996 KIR2DL5BA0A0G2JN68 375 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 KIR2DL5BA0A0G2JPC4 375 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 G3V3Q6 166 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 ISLRO14498 428 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 SOCS3O14543 225 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 PSMB3P49720 205 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 ZNF266Q14584 549 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 APRG1Q8IVJ8 170 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 KIR2DL5AQ8N109 375 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 KIR2DL5BQ8NHK3 375 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 RSG1Q9BU20 258 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 SMIM3Q9BZL3 60 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 ZMAT4Q9H898 229 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 WFDC1Q9HC57 220 aa16.27■□□□□ 0.2
APOE-204ENST00000446996 A0A087X0K7 114 aa16.26■□□□□ 0.19
APOE-204ENST00000446996 ZNF688P0C7X2 276 aa16.26■□□□□ 0.19
APOE-204ENST00000446996 LEMD1Q68G75 181 aa16.26■□□□□ 0.19
APOE-204ENST00000446996 BPIFA4PQ86YQ2 179 aa16.26■□□□□ 0.19
APOE-204ENST00000446996 FXYD6-FXYD2A0A087WZ82 144 aa16.25■□□□□ 0.19
APOE-204ENST00000446996 MRPS12O15235 138 aaKnown RBP16.25■□□□□ 0.19
APOE-204ENST00000446996 ATF4P18848 351 aaPredicted RBP16.25■□□□□ 0.19
APOE-204ENST00000446996 APOC4P55056 127 aa16.25■□□□□ 0.19
APOE-204ENST00000446996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.25■□□□□ 0.19
APOE-204ENST00000446996 C17orf77Q96MU5 243 aa16.25■□□□□ 0.19
APOE-204ENST00000446996 SPATA25Q9BR10 227 aa16.25■□□□□ 0.19
APOE-204ENST00000446996 RNF222A6NCQ9 220 aa16.24■□□□□ 0.19
APOE-204ENST00000446996 UBE2CO00762 179 aa16.24■□□□□ 0.19
APOE-204ENST00000446996 TIMM9Q9Y5J7 89 aa16.24■□□□□ 0.19
APOE-204ENST00000446996 CXCL2P19875 107 aa16.23■□□□□ 0.19
APOE-204ENST00000446996 PSMG4Q5JS54 123 aa16.23■□□□□ 0.19
APOE-204ENST00000446996 ZNF124Q15973 351 aa16.22■□□□□ 0.19
APOE-204ENST00000446996 C16orf92Q96LL3 132 aa16.22■□□□□ 0.19
APOE-204ENST00000446996 MRPL32Q9BYC8 188 aaKnown RBP16.22■□□□□ 0.19
APOE-204ENST00000446996 MORN5Q5VZ52 161 aa16.21■□□□□ 0.19
APOE-204ENST00000446996 SPATA31B1PQ5VZV4 182 aa16.21■□□□□ 0.19
APOE-204ENST00000446996 STHQ8IWL8 128 aa16.21■□□□□ 0.19
APOE-204ENST00000446996 U3KQK5 164 aa16.21■□□□□ 0.19
APOE-204ENST00000446996 AGRNO00468 2067 aa16.2■□□□□ 0.18
APOE-204ENST00000446996 HMSDA8MTL9 139 aa16.2■□□□□ 0.18
APOE-204ENST00000446996 TAAR5O14804 337 aa16.2■□□□□ 0.18
APOE-204ENST00000446996 GUK1Q16774 197 aa16.2■□□□□ 0.18
APOE-204ENST00000446996 FAM78BQ5VT40 261 aa16.2■□□□□ 0.18
APOE-204ENST00000446996 LCN15Q6UWW0 184 aa16.2■□□□□ 0.18
APOE-204ENST00000446996 CSTL1Q9H114 145 aa16.2■□□□□ 0.18
APOE-204ENST00000446996 TMEM14CQ9P0S9 112 aa16.2■□□□□ 0.18
APOE-204ENST00000446996 FFAR4Q5NUL3 377 aa16.19■□□□□ 0.18
APOE-204ENST00000446996 Q6ZWC4 215 aa16.19■□□□□ 0.18
APOE-204ENST00000446996 TRPT1Q86TN4 253 aaKnown RBP16.19■□□□□ 0.18
APOE-204ENST00000446996 SLC50A1Q9BRV3 221 aa16.19■□□□□ 0.18
APOE-204ENST00000446996 PSMG3Q9BT73 122 aaPredicted RBP16.19■□□□□ 0.18
APOE-204ENST00000446996 HRH4Q9H3N8 390 aa16.19■□□□□ 0.18
APOE-204ENST00000446996 RPRMQ9NS64 109 aa16.19■□□□□ 0.18
APOE-204ENST00000446996 CLEC5AQ9NY25 188 aa16.19■□□□□ 0.18
APOE-204ENST00000446996 COL7A1Q02388 2944 aa16.19■□□□□ 0.18
APOE-204ENST00000446996 HUWE1Q7Z6Z7 4374 aaKnown RBP16.18■□□□□ 0.18
APOE-204ENST00000446996 BORCS7-ASMTA0A0B4J1R7 106 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 TRAV5A0A0B4J249 113 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 IGLC2P0DOY2 106 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 RPL35AP18077 110 aaKnown RBP16.18■□□□□ 0.18
APOE-204ENST00000446996 ZNF345Q14585 488 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 GCSAMLQ5JQS6 135 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 MORN3Q6PF18 240 aaPredicted RBP16.18■□□□□ 0.18
APOE-204ENST00000446996 FOXI2Q6ZQN5 318 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 OR2G3Q8NGZ4 309 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 LINC00052Q96N35 136 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 CLUHP3Q96NS8 147 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 MFFQ9GZY8 342 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 FUT9Q9Y231 359 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 TP53TG1Q9Y2A0 90 aa16.18■□□□□ 0.18
APOE-204ENST00000446996 ARPC5O15511 151 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 ZNF253O75346 499 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 SPP1P10451 314 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 HLA-DRB4P13762 266 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 SERF2P84101 59 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 ACOT6Q3I5F7 207 aaPredicted RBP16.17■□□□□ 0.18
APOE-204ENST00000446996 TMEM41BQ5BJD5 291 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 ACTL10Q5JWF8 245 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 LRRC20Q8TCA0 184 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 RCHY1Q96PM5 261 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 SAV1Q9H4B6 383 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms