RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 C20orf173Q96LM9 149 aa10.86□□□□□ -0.67
HDAC4-204ENST00000446876 ARV1Q9H2C2 271 aa10.86□□□□□ -0.67
HDAC4-204ENST00000446876 A0A0J9YWU9 116 aa10.85□□□□□ -0.67
HDAC4-204ENST00000446876 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-204ENST00000446876 FGF7P21781 194 aa10.85□□□□□ -0.67
HDAC4-204ENST00000446876 PSMB3P49720 205 aa10.85□□□□□ -0.67
HDAC4-204ENST00000446876 CASC10Q5T4H9 136 aa10.85□□□□□ -0.67
HDAC4-204ENST00000446876 IGFL4Q6B9Z1 124 aa10.85□□□□□ -0.67
HDAC4-204ENST00000446876 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
HDAC4-204ENST00000446876 RNF126Q9BV68 326 aa10.85□□□□□ -0.67
HDAC4-204ENST00000446876 SEPSECSQ9HD40 501 aaKnown RBP10.85□□□□□ -0.67
HDAC4-204ENST00000446876 KMT2CQ8NEZ4 4911 aaKnown RBP10.84□□□□□ -0.67
HDAC4-204ENST00000446876 COX7A2P2O60397 106 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 MPC2O95563 127 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 CXCL3P19876 107 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 ID1P41134 155 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 FGL1Q08830 312 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 CLINT1Q14677 625 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 MORN5Q5VZ52 161 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 OR5C1Q8NGR4 320 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 TMEM37Q8WXS4 190 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 GPR82Q96P67 336 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 CLEC5AQ9NY25 188 aa10.84□□□□□ -0.67
HDAC4-204ENST00000446876 F6UB75 175 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 H3BMM0 161 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 ISLRO14498 428 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 IGKV3-20P01619 116 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 SNRPCP09234 159 aaKnown RBP10.83□□□□□ -0.68
HDAC4-204ENST00000446876 HLA-DRB4P13762 266 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 ATF4P18848 351 aaPredicted RBP10.83□□□□□ -0.68
HDAC4-204ENST00000446876 S100A7P31151 101 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 PRR20EP86478 221 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 PRR20CP86479 221 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 PRR20DP86480 221 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 PRR20BP86481 221 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 PRR20AP86496 221 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 RAB31Q13636 194 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 OPCMLQ14982 345 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 FCN2Q15485 313 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 ATP6V1FQ16864 119 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 PXDC1Q5TGL8 231 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 LINC00305Q7Z4B0 112 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 THAP6Q8TBB0 222 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 SLC25A31Q9H0C2 315 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 MBD2Q9UBB5 411 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 HLA-DRB4X5D2U9 266 aa10.83□□□□□ -0.68
HDAC4-204ENST00000446876 CSMD3Q7Z407 3707 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 TRAV8-2A0A0B4J237 113 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 PRB4P10163 310 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-204ENST00000446876 SPP1P10451 314 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 RPL7P18124 248 aaKnown RBP10.82□□□□□ -0.68
HDAC4-204ENST00000446876 MEOX2P50222 304 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 C10orf113Q5VZT2 155 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 MORN3Q6PF18 240 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-204ENST00000446876 RNF182Q8N6D2 247 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 OR11H7Q8NGC8 314 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 OR11H2Q8NH07 326 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 GATAD1Q8WUU5 269 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 RARRES2Q99969 163 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 SAV1Q9H4B6 383 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-204ENST00000446876 PXMP4Q9Y6I8 212 aa10.82□□□□□ -0.68
HDAC4-204ENST00000446876 MRPS12O15235 138 aaKnown RBP10.81□□□□□ -0.68
HDAC4-204ENST00000446876 HLA-DMBP28068 263 aa10.81□□□□□ -0.68
HDAC4-204ENST00000446876 RPL29P47914 159 aaKnown RBP10.81□□□□□ -0.68
HDAC4-204ENST00000446876 FXYD7P58549 80 aa10.81□□□□□ -0.68
HDAC4-204ENST00000446876 B2MP61769 119 aa10.81□□□□□ -0.68
HDAC4-204ENST00000446876 FOXI2Q6ZQN5 318 aa10.81□□□□□ -0.68
HDAC4-204ENST00000446876 NPCDR1Q9BY65 106 aa10.81□□□□□ -0.68
HDAC4-204ENST00000446876 SLC39A9Q9NUM3 307 aa10.81□□□□□ -0.68
HDAC4-204ENST00000446876 A0A087X0K7 114 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 TRAV5A0A0B4J249 113 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 H3BTX0 84 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 DEFB4AO15263 64 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 PET100P0DJ07 73 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 GCSAMLQ5JQS6 135 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 Q6ZRG5 221 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 OR4B1Q8NGF8 309 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 SMIM3Q9BZL3 60 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 MED28Q9H204 178 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 DNAJC4Q9NNZ3 241 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 XCL2Q9UBD3 114 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 HSPB11Q9Y547 144 aa10.8□□□□□ -0.68
HDAC4-204ENST00000446876 ELOA3CA0A087WX78 387 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-204ENST00000446876 A0A0J9YX75 114 aa10.79□□□□□ -0.68
HDAC4-204ENST00000446876 RPL12P30050 165 aaKnown RBP10.79□□□□□ -0.68
HDAC4-204ENST00000446876 RGS21Q2M5E4 152 aa10.79□□□□□ -0.68
HDAC4-204ENST00000446876 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
HDAC4-204ENST00000446876 S100A7AQ86SG5 101 aa10.79□□□□□ -0.68
HDAC4-204ENST00000446876 CSNK1G2-AS1Q8NCQ2 148 aa10.79□□□□□ -0.68
HDAC4-204ENST00000446876 IL17DQ8TAD2 202 aa10.79□□□□□ -0.68
HDAC4-204ENST00000446876 RPRMQ9NS64 109 aa10.79□□□□□ -0.68
HDAC4-204ENST00000446876 MPDU1O75352 247 aa10.78□□□□□ -0.68
HDAC4-204ENST00000446876 ZNF705DP0CH99 300 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-204ENST00000446876 ZNF705BP0CI00 300 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-204ENST00000446876 PMS2P11Q13670 270 aa10.78□□□□□ -0.68
HDAC4-204ENST00000446876 FAM78BQ5VT40 261 aa10.78□□□□□ -0.68
HDAC4-204ENST00000446876 EBLN2Q6P2I7 272 aa10.78□□□□□ -0.68
HDAC4-204ENST00000446876 OR1L4Q8NGR5 311 aa10.78□□□□□ -0.68
HDAC4-204ENST00000446876 CHAC2Q8WUX2 184 aa10.78□□□□□ -0.68
HDAC4-204ENST00000446876 ATP5SQ99766 215 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms