RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 SIT1Q9Y3P8 196 aa11.14□□□□□ -0.63
VPS52-212ENST00000445902 MBNL2Q5VZF2 373 aaKnown RBP11.14□□□□□ -0.63
VPS52-212ENST00000445902 MAP1BP46821 2468 aaKnown RBP11.14□□□□□ -0.63
VPS52-212ENST00000445902 ZNF785A8K8V0 405 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 NPIPB6E9PJ23 425 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 STXBP6Q8NFX7 210 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 OR5A1Q8NGJ0 315 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 DKK2Q9UBU2 259 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 TPRP12270 2363 aaKnown RBP11.13□□□□□ -0.63
VPS52-212ENST00000445902 GPR179Q6PRD1 2367 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 A0A1W2PPI3 338 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 TMEM213A2RRL7 107 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 SLC25A17O43808 307 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 CCL3L1P16619 93 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 LYZP61626 148 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 THAP8Q8NA92 274 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 TNFRSF14Q92956 283 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 RPUSD1Q9UJJ7 312 aaKnown RBP11.13□□□□□ -0.63
VPS52-212ENST00000445902 AGRNO00468 2067 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 SMKR1H3BMG3 65 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 APOBEC3AP31941 199 aaPredicted RBP11.13□□□□□ -0.63
VPS52-212ENST00000445902 FXYD2P54710 66 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 MZT1Q08AG7 82 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 RIGQ13278 110 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 PSG3Q16557 428 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 AMN1Q8IY45 258 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 ZCCHC24Q8N2G6 241 aaKnown RBP11.13□□□□□ -0.63
VPS52-212ENST00000445902 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 OSR1Q8TAX0 266 aaPredicted RBP11.13□□□□□ -0.63
VPS52-212ENST00000445902 RITA1Q96K30 269 aa11.13□□□□□ -0.63
VPS52-212ENST00000445902 A0A1W2PRD5 423 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 A0A1W2PRF3 423 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 A0A1W2PRM7 423 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 KIR2DL2P43627 348 aaPredicted RBP11.12□□□□□ -0.63
VPS52-212ENST00000445902 SUB1P53999 127 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPS52-212ENST00000445902 C9orf106Q8NAJ2 232 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 ZNF414Q96IQ9 312 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 TSSC4Q9Y5U2 329 aaPredicted RBP11.12□□□□□ -0.63
VPS52-212ENST00000445902 PKDREJQ9NTG1 2253 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 CEP250Q9BV73 2442 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 IGHV3-72A0A0B4J1Y9 119 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 DHRS13Q6UX07 377 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 MTURNQ8N3F0 131 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 C17orf77Q96MU5 243 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 GAFA1Q96PS6 74 aa11.12□□□□□ -0.63
VPS52-212ENST00000445902 OR9G4Q8NGQ1 327 aa11.11□□□□□ -0.63
VPS52-212ENST00000445902 RAB9BQ9NP90 201 aa11.11□□□□□ -0.63
VPS52-212ENST00000445902 CACNA1GO43497 2377 aa11.11□□□□□ -0.63
VPS52-212ENST00000445902 M0R1B8 84 aa11.11□□□□□ -0.63
VPS52-212ENST00000445902 LHBP01229 141 aa11.11□□□□□ -0.63
VPS52-212ENST00000445902 SMIM13P0DJ93 91 aa11.11□□□□□ -0.63
VPS52-212ENST00000445902 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
VPS52-212ENST00000445902 A0A1W2PNU3 283 aaPredicted RBP11.1□□□□□ -0.63
VPS52-212ENST00000445902 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 FAM222BQ8WU58 562 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 PRELID3AQ96N28 172 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 TACC2O95359 2948 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 CSMD1Q96PZ7 3565 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 ZZEF1O43149 2961 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 IGKV2D-26A0A0A0MRZ7 120 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 TNFRSF1AP19438 455 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 LGALS9BQ3B8N2 356 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 LGALS9CQ6DKI2 356 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 ZNF788Q6ZQV5 615 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 SIGMAR1Q99720 223 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 ENSAO43768 121 aaKnown RBP11.1□□□□□ -0.63
VPS52-212ENST00000445902 ZNF833PQ6ZTB9 187 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 IFI27L1Q96BM0 104 aa11.1□□□□□ -0.63
VPS52-212ENST00000445902 PPIAL4EA0A075B759 164 aa11.09□□□□□ -0.63
VPS52-212ENST00000445902 PPIAL4FP0DN26 164 aa11.09□□□□□ -0.63
VPS52-212ENST00000445902 TMEM167AQ8TBQ9 72 aa11.09□□□□□ -0.63
VPS52-212ENST00000445902 NHP2Q9NX24 153 aaKnown RBP11.09□□□□□ -0.63
VPS52-212ENST00000445902 CRIP1P50238 77 aa11.09□□□□□ -0.63
VPS52-212ENST00000445902 WFDC2Q14508 124 aa11.09□□□□□ -0.63
VPS52-212ENST00000445902 OR10X1Q8NGY0 326 aa11.09□□□□□ -0.63
VPS52-212ENST00000445902 C8orf49Q96NF6 230 aa11.09□□□□□ -0.63
VPS52-212ENST00000445902 RNF7Q9UBF6 113 aa11.09□□□□□ -0.63
VPS52-212ENST00000445902 IGLV1-44P01699 117 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 SMIM17P0DL12 118 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 LYZL1Q6UWQ5 148 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 OR4C13Q8NGP0 309 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 DPF1Q92782 380 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 OTORQ9NRC9 128 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 HIGD1AQ9Y241 93 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 MALRD1Q5VYJ5 2156 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 COL27A1Q8IZC6 1860 aaPredicted RBP11.08□□□□□ -0.64
VPS52-212ENST00000445902 HBDP02042 147 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 PRB3Q04118 309 aaPredicted RBP11.08□□□□□ -0.64
VPS52-212ENST00000445902 SH2D6Q7Z4S9 175 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 WFDC12Q8WWY7 111 aa11.08□□□□□ -0.64
VPS52-212ENST00000445902 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
VPS52-212ENST00000445902 SPAARA0A1B0GVQ0 90 aa11.07□□□□□ -0.64
VPS52-212ENST00000445902 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
VPS52-212ENST00000445902 C8orf46Q8TAG6 207 aa11.07□□□□□ -0.64
VPS52-212ENST00000445902 GAGE12HA6NDE8 117 aa11.07□□□□□ -0.64
VPS52-212ENST00000445902 M0R3E3 92 aa11.07□□□□□ -0.64
VPS52-212ENST00000445902 IGLV2-23P01705 113 aa11.07□□□□□ -0.64
VPS52-212ENST00000445902 SPRY4Q9C004 299 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms