RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 THAP6Q8TBB0 222 aa17.67■□□□□ 0.42
C9orf3-207ENST00000445181 RSG1Q9BU20 258 aa17.67■□□□□ 0.42
C9orf3-207ENST00000445181 SEPSECSQ9HD40 501 aaKnown RBP17.67■□□□□ 0.42
C9orf3-207ENST00000445181 UBE2CO00762 179 aa17.66■□□□□ 0.42
C9orf3-207ENST00000445181 PATE2Q6UY27 113 aa17.66■□□□□ 0.42
C9orf3-207ENST00000445181 LINC00052Q96N35 136 aa17.66■□□□□ 0.42
C9orf3-207ENST00000445181 EDA2RQ9HAV5 297 aa17.66■□□□□ 0.42
C9orf3-207ENST00000445181 RNF24Q9Y225 148 aa17.66■□□□□ 0.42
C9orf3-207ENST00000445181 KNCNA6PVL3 124 aa17.65■□□□□ 0.42
C9orf3-207ENST00000445181 MPDU1O75352 247 aa17.65■□□□□ 0.42
C9orf3-207ENST00000445181 ATF4P18848 351 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-207ENST00000445181 RPL12P30050 165 aaKnown RBP17.65■□□□□ 0.42
C9orf3-207ENST00000445181 MEOX2P50222 304 aa17.65■□□□□ 0.42
C9orf3-207ENST00000445181 ACTL10Q5JWF8 245 aa17.65■□□□□ 0.42
C9orf3-207ENST00000445181 SAMD13Q5VXD3 122 aa17.65■□□□□ 0.42
C9orf3-207ENST00000445181 C10orf113Q5VZT2 155 aa17.65■□□□□ 0.42
C9orf3-207ENST00000445181 LINC00305Q7Z4B0 112 aa17.65■□□□□ 0.42
C9orf3-207ENST00000445181 CSTL1Q9H114 145 aa17.65■□□□□ 0.42
C9orf3-207ENST00000445181 ELOA3CA0A087WX78 387 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-207ENST00000445181 RPL7P18124 248 aaKnown RBP17.64■□□□□ 0.41
C9orf3-207ENST00000445181 RPL29P47914 159 aaKnown RBP17.64■□□□□ 0.41
C9orf3-207ENST00000445181 B2MP61769 119 aa17.64■□□□□ 0.41
C9orf3-207ENST00000445181 C16orf92Q96LL3 132 aa17.64■□□□□ 0.41
C9orf3-207ENST00000445181 HSPB11Q9Y547 144 aa17.64■□□□□ 0.41
C9orf3-207ENST00000445181 PSMB3P49720 205 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 PRR20EP86478 221 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 PRR20CP86479 221 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 PRR20DP86480 221 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 PRR20BP86481 221 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 PRR20AP86496 221 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 FGL1Q08830 312 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 OPCMLQ14982 345 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 DEFB135Q30KP9 77 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 Q6ZWC4 215 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 OR1L4Q8NGR5 311 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 NPCDR1Q9BY65 106 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 DNAJC4Q9NNZ3 241 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 SLC39A9Q9NUM3 307 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 PXMP4Q9Y6I8 212 aa17.63■□□□□ 0.41
C9orf3-207ENST00000445181 ISLRO14498 428 aa17.62■□□□□ 0.41
C9orf3-207ENST00000445181 TMEM37Q8WXS4 190 aa17.62■□□□□ 0.41
C9orf3-207ENST00000445181 PFDN5Q99471 154 aa17.62■□□□□ 0.41
C9orf3-207ENST00000445181 ATP5SQ99766 215 aa17.62■□□□□ 0.41
C9orf3-207ENST00000445181 SMIM3Q9BZL3 60 aa17.62■□□□□ 0.41
C9orf3-207ENST00000445181 SOCS3O14543 225 aa17.61■□□□□ 0.41
C9orf3-207ENST00000445181 GIPP09681 153 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-207ENST00000445181 ZFAND6Q6FIF0 208 aa17.61■□□□□ 0.41
C9orf3-207ENST00000445181 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.61■□□□□ 0.41
C9orf3-207ENST00000445181 ZNF709Q8N972 641 aa17.61■□□□□ 0.41
C9orf3-207ENST00000445181 CHAC2Q8WUX2 184 aa17.61■□□□□ 0.41
C9orf3-207ENST00000445181 ASB13Q8WXK3 278 aa17.61■□□□□ 0.41
C9orf3-207ENST00000445181 OVOL2Q9BRP0 275 aa17.61■□□□□ 0.41
C9orf3-207ENST00000445181 SPRY2O43597 315 aa17.6■□□□□ 0.41
C9orf3-207ENST00000445181 CA1P00915 261 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-207ENST00000445181 TRPT1Q86TN4 253 aaKnown RBP17.6■□□□□ 0.41
C9orf3-207ENST00000445181 AGRNO00468 2067 aa17.59■□□□□ 0.41
C9orf3-207ENST00000445181 WDR61Q9GZS3 305 aaKnown RBP17.59■□□□□ 0.41
C9orf3-207ENST00000445181 TP53TG1Q9Y2A0 90 aa17.59■□□□□ 0.41
C9orf3-207ENST00000445181 DNAH7Q8WXX0 4024 aa17.58■□□□□ 0.4
C9orf3-207ENST00000445181 C17orf112F2Z3M2 114 aa17.58■□□□□ 0.4
C9orf3-207ENST00000445181 IFNA5P01569 189 aa17.58■□□□□ 0.4
C9orf3-207ENST00000445181 BPIFA4PQ86YQ2 179 aa17.58■□□□□ 0.4
C9orf3-207ENST00000445181 LRRC20Q8TCA0 184 aa17.58■□□□□ 0.4
C9orf3-207ENST00000445181 RNF183Q96D59 192 aa17.58■□□□□ 0.4
C9orf3-207ENST00000445181 KCNIP2Q9NS61 270 aa17.58■□□□□ 0.4
C9orf3-207ENST00000445181 SPP1P10451 314 aa17.57■□□□□ 0.4
C9orf3-207ENST00000445181 MORN3Q6PF18 240 aaPredicted RBP17.57■□□□□ 0.4
C9orf3-207ENST00000445181 SCGB1C1Q8TD33 95 aa17.57■□□□□ 0.4
C9orf3-207ENST00000445181 C17orf77Q96MU5 243 aa17.57■□□□□ 0.4
C9orf3-207ENST00000445181 RPRMQ9NS64 109 aa17.57■□□□□ 0.4
C9orf3-207ENST00000445181 DEFB1P60022 68 aa17.56■□□□□ 0.4
C9orf3-207ENST00000445181 MORN5Q5VZ52 161 aa17.56■□□□□ 0.4
C9orf3-207ENST00000445181 A0A087X0K7 114 aa17.55■□□□□ 0.4
C9orf3-207ENST00000445181 H3BMM0 161 aa17.55■□□□□ 0.4
C9orf3-207ENST00000445181 HLA-DRB4P13762 266 aa17.55■□□□□ 0.4
C9orf3-207ENST00000445181 IGFL4Q6B9Z1 124 aa17.55■□□□□ 0.4
C9orf3-207ENST00000445181 EBLN2Q6P2I7 272 aa17.55■□□□□ 0.4
C9orf3-207ENST00000445181 FOXI2Q6ZQN5 318 aa17.55■□□□□ 0.4
C9orf3-207ENST00000445181 GATAD1Q8WUU5 269 aa17.55■□□□□ 0.4
C9orf3-207ENST00000445181 C20orf173Q96LM9 149 aa17.55■□□□□ 0.4
C9orf3-207ENST00000445181 SAV1Q9H4B6 383 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-207ENST00000445181 HLA-DRB4X5D2U9 266 aa17.55■□□□□ 0.4
C9orf3-207ENST00000445181 TRAV5A0A0B4J249 113 aa17.54■□□□□ 0.4
C9orf3-207ENST00000445181 NUTF2P61970 127 aaKnown RBP17.54■□□□□ 0.4
C9orf3-207ENST00000445181 Q5BKY6 102 aa17.54■□□□□ 0.4
C9orf3-207ENST00000445181 GCSAMLQ5JQS6 135 aa17.54■□□□□ 0.4
C9orf3-207ENST00000445181 GDF5OSQ5U4N7 250 aa17.54■□□□□ 0.4
C9orf3-207ENST00000445181 MRPS12O15235 138 aaKnown RBP17.53■□□□□ 0.4
C9orf3-207ENST00000445181 IGKV3-20P01619 116 aa17.53■□□□□ 0.4
C9orf3-207ENST00000445181 SNRPCP09234 159 aaKnown RBP17.53■□□□□ 0.4
C9orf3-207ENST00000445181 TMEM41BQ5BJD5 291 aa17.53■□□□□ 0.4
C9orf3-207ENST00000445181 RNF182Q8N6D2 247 aa17.53■□□□□ 0.4
C9orf3-207ENST00000445181 OR4B1Q8NGF8 309 aa17.53■□□□□ 0.4
C9orf3-207ENST00000445181 OR2T35Q8NGX2 323 aa17.53■□□□□ 0.4
C9orf3-207ENST00000445181 TRAV8-2A0A0B4J237 113 aa17.52■□□□□ 0.4
C9orf3-207ENST00000445181 F6UB75 175 aa17.52■□□□□ 0.4
C9orf3-207ENST00000445181 SPATA31B1PQ5VZV4 182 aa17.52■□□□□ 0.4
C9orf3-207ENST00000445181 LCN15Q6UWW0 184 aa17.52■□□□□ 0.4
C9orf3-207ENST00000445181 INO80EQ8NBZ0 244 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-207ENST00000445181 WFDC1Q9HC57 220 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms