RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 SLC25A39Q9BZJ4 359 aaPredicted RBP7.66□□□□□ -1.18
HLA-DQB1-206ENST00000443574 MED28Q9H204 178 aa7.66□□□□□ -1.18
HLA-DQB1-206ENST00000443574 WDR83OSQ9Y284 106 aa7.66□□□□□ -1.18
HLA-DQB1-206ENST00000443574 NBEAL2Q6ZNJ1 2754 aa7.66□□□□□ -1.18
HLA-DQB1-206ENST00000443574 ELOA3CA0A087WX78 387 aaPredicted RBP7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 H3BRN7 92 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 ISLRO14498 428 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 SPP1P10451 314 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 FGF7P21781 194 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 NUTF2P61970 127 aaKnown RBP7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 EWSR1Q01844 656 aaKnown RBP eCLIP7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 ARL16Q0P5N6 197 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 ZNF124Q15973 351 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 VWC2Q2TAL6 325 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 DEFB135Q30KP9 77 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 MORN3Q6PF18 240 aaPredicted RBP7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 FAM24BQ8N5W8 94 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 OR5C1Q8NGR4 320 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 OR1L4Q8NGR5 311 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 MGST2Q99735 147 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 SHANK2-AS3Q9BTD1 123 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 SCRT1Q9BWW7 348 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 CSTL1Q9H114 145 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 ARV1Q9H2C2 271 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 SLC25A32Q9H2D1 315 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 RETNQ9HD89 108 aa7.65□□□□□ -1.18
HLA-DQB1-206ENST00000443574 SPRY2O43597 315 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 MPC2O95563 127 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 CA1P00915 261 aaPredicted RBP7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 C10orf113Q5VZT2 155 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 TMEM182Q6ZP80 229 aaPredicted RBP7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 IL17DQ8TAD2 202 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 THAP6Q8TBB0 222 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 GATAD1Q8WUU5 269 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 ASB13Q8WXK3 278 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 C16orf92Q96LL3 132 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 C1QTNF4Q9BXJ3 329 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 OR5AC2Q9NZP5 309 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 AGRNO00468 2067 aa7.64□□□□□ -1.19
HLA-DQB1-206ENST00000443574 C17orf112F2Z3M2 114 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 C3orf84H3BNL1 204 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 RPL29P47914 159 aaKnown RBP7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 B2MP61769 119 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 FGL1Q08830 312 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 OPCMLQ14982 345 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 ACTL10Q5JWF8 245 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 SPATA31B1PQ5VZV4 182 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 LINC00305Q7Z4B0 112 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 TRPT1Q86TN4 253 aaKnown RBP7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 BPIFA4PQ86YQ2 179 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 ZNF709Q8N972 641 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 MUC7Q8TAX7 377 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 LRRC20Q8TCA0 184 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 UHRF2Q96PU4 802 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 RPRMQ9NS64 109 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 MBD2Q9UBB5 411 aa7.63□□□□□ -1.19
HLA-DQB1-206ENST00000443574 RPL12P30050 165 aaKnown RBP7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 NHLH2Q02577 135 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 CLINT1Q14677 625 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 MIC13Q5XKP0 118 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 EBLN2Q6P2I7 272 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 LCN15Q6UWW0 184 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 FOXI2Q6ZQN5 318 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 RNF183Q96D59 192 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 LINC00052Q96N35 136 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 ATP5SQ99766 215 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 OVOL2Q9BRP0 275 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 RSG1Q9BU20 258 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 NPCDR1Q9BY65 106 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 EDA2RQ9HAV5 297 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 SLC39A9Q9NUM3 307 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 PXMP4Q9Y6I8 212 aa7.62□□□□□ -1.19
HLA-DQB1-206ENST00000443574 A0A087X0K7 114 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 KNCNA6PVL3 124 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 H0YIZ8 118 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 IFNA5P01569 189 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 HLA-DRB4P13762 266 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 CXCL2P19875 107 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 CHAC2Q8WUX2 184 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 SLC50A1Q9BRV3 221 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 DNAJC4Q9NNZ3 241 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 HSPB11Q9Y547 144 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 HLA-DRB4X5D2U9 266 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 DNAH7Q8WXX0 4024 aa7.61□□□□□ -1.19
HLA-DQB1-206ENST00000443574 SOCS3O14543 225 aa7.6□□□□□ -1.19
HLA-DQB1-206ENST00000443574 GIPP09681 153 aaPredicted RBP7.6□□□□□ -1.19
HLA-DQB1-206ENST00000443574 LYL1P12980 280 aa7.6□□□□□ -1.19
HLA-DQB1-206ENST00000443574 CXCL3P19876 107 aa7.6□□□□□ -1.19
HLA-DQB1-206ENST00000443574 FCN2Q15485 313 aa7.6□□□□□ -1.19
HLA-DQB1-206ENST00000443574 SCGB1C1Q8TD33 95 aa7.6□□□□□ -1.19
HLA-DQB1-206ENST00000443574 RARRES2Q99969 163 aa7.6□□□□□ -1.19
HLA-DQB1-206ENST00000443574 WDR61Q9GZS3 305 aaKnown RBP7.6□□□□□ -1.19
HLA-DQB1-206ENST00000443574 SAV1Q9H4B6 383 aaPredicted RBP7.6□□□□□ -1.19
HLA-DQB1-206ENST00000443574 ZNF266Q14584 549 aa7.59□□□□□ -1.19
HLA-DQB1-206ENST00000443574 OXA1LQ15070 435 aa7.59□□□□□ -1.19
HLA-DQB1-206ENST00000443574 GUK1Q16774 197 aa7.59□□□□□ -1.19
HLA-DQB1-206ENST00000443574 PATE2Q6UY27 113 aa7.59□□□□□ -1.19
HLA-DQB1-206ENST00000443574 OR11H7Q8NGC8 314 aa7.59□□□□□ -1.19
HLA-DQB1-206ENST00000443574 OR4B1Q8NGF8 309 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms