RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PATE2Q6UY27 113 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 OR1L4Q8NGR5 311 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 RCHY1Q96PM5 261 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 SCRT1Q9BWW7 348 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 DNAJC4Q9NNZ3 241 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 HSPB11Q9Y547 144 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 ID1P41134 155 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 PSMB3P49720 205 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 B2MP61769 119 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 CLINT1Q14677 625 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 ZNF124Q15973 351 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 C10orf113Q5VZT2 155 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 MIC13Q5XKP0 118 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 LEMD1Q68G75 181 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 UHRF2Q96PU4 802 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 PFDN5Q99471 154 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 ATP5SQ99766 215 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 NPCDR1Q9BY65 106 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 SLC39A9Q9NUM3 307 aa8.73□□□□□ -1.01
HSPG2-206ENST00000439717 ISLRO14498 428 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 SOCS3O14543 225 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
HSPG2-206ENST00000439717 PSMG4Q5JS54 123 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 Q6ZWC4 215 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 LINC00305Q7Z4B0 112 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 STHQ8IWL8 128 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 TMEM37Q8WXS4 190 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 RSG1Q9BU20 258 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 WDR61Q9GZS3 305 aaKnown RBP8.72□□□□□ -1.01
HSPG2-206ENST00000439717 KCNIP2Q9NS61 270 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 PXMP4Q9Y6I8 212 aa8.72□□□□□ -1.01
HSPG2-206ENST00000439717 HUWE1Q7Z6Z7 4374 aaKnown RBP8.71□□□□□ -1.01
HSPG2-206ENST00000439717 A0A087X0K7 114 aa8.71□□□□□ -1.02
HSPG2-206ENST00000439717 IFNA5P01569 189 aa8.71□□□□□ -1.02
HSPG2-206ENST00000439717 ATF4P18848 351 aaPredicted RBP8.71□□□□□ -1.02
HSPG2-206ENST00000439717 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.71□□□□□ -1.02
HSPG2-206ENST00000439717 ZNF709Q8N972 641 aa8.71□□□□□ -1.02
HSPG2-206ENST00000439717 GATAD1Q8WUU5 269 aa8.71□□□□□ -1.02
HSPG2-206ENST00000439717 C16orf92Q96LL3 132 aa8.71□□□□□ -1.02
HSPG2-206ENST00000439717 WWC2-AS2Q96NR7 200 aa8.71□□□□□ -1.02
HSPG2-206ENST00000439717 PARD6GQ9BYG4 376 aaPredicted RBP8.71□□□□□ -1.02
HSPG2-206ENST00000439717 CSTL1Q9H114 145 aa8.71□□□□□ -1.02
HSPG2-206ENST00000439717 TP53TG1Q9Y2A0 90 aa8.71□□□□□ -1.02
HSPG2-206ENST00000439717 C17orf112F2Z3M2 114 aa8.7□□□□□ -1.02
HSPG2-206ENST00000439717 TRPT1Q86TN4 253 aaKnown RBP8.7□□□□□ -1.02
HSPG2-206ENST00000439717 BPIFA4PQ86YQ2 179 aa8.7□□□□□ -1.02
HSPG2-206ENST00000439717 SCGB1C1Q8TD33 95 aa8.7□□□□□ -1.02
HSPG2-206ENST00000439717 C17orf77Q96MU5 243 aa8.7□□□□□ -1.02
HSPG2-206ENST00000439717 LINC00052Q96N35 136 aa8.7□□□□□ -1.02
HSPG2-206ENST00000439717 AQP10Q96PS8 301 aa8.7□□□□□ -1.02
HSPG2-206ENST00000439717 KNCNA6PVL3 124 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 MRPS12O15235 138 aaKnown RBP8.69□□□□□ -1.02
HSPG2-206ENST00000439717 SPP1P10451 314 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 CXCL2P19875 107 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 TMEM41BQ5BJD5 291 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 Q5BKY6 102 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 ACTL10Q5JWF8 245 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 SPATA31B1PQ5VZV4 182 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 MORN3Q6PF18 240 aaPredicted RBP8.69□□□□□ -1.02
HSPG2-206ENST00000439717 FOXI2Q6ZQN5 318 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 OR2T35Q8NGX2 323 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 OVOL2Q9BRP0 275 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 SMIM3Q9BZL3 60 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 RETNQ9HD89 108 aa8.69□□□□□ -1.02
HSPG2-206ENST00000439717 H3BMM0 161 aa8.68□□□□□ -1.02
HSPG2-206ENST00000439717 SPRY2O43597 315 aa8.68□□□□□ -1.02
HSPG2-206ENST00000439717 HLA-DRB4P13762 266 aa8.68□□□□□ -1.02
HSPG2-206ENST00000439717 MORN5Q5VZ52 161 aa8.68□□□□□ -1.02
HSPG2-206ENST00000439717 INO80EQ8NBZ0 244 aaPredicted RBP8.68□□□□□ -1.02
HSPG2-206ENST00000439717 RNF183Q96D59 192 aa8.68□□□□□ -1.02
HSPG2-206ENST00000439717 SAV1Q9H4B6 383 aaPredicted RBP8.68□□□□□ -1.02
HSPG2-206ENST00000439717 WFDC1Q9HC57 220 aa8.68□□□□□ -1.02
HSPG2-206ENST00000439717 RPRMQ9NS64 109 aa8.68□□□□□ -1.02
HSPG2-206ENST00000439717 HLA-DRB4X5D2U9 266 aa8.68□□□□□ -1.02
HSPG2-206ENST00000439717 CA1P00915 261 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-206ENST00000439717 NUTF2P61970 127 aaKnown RBP8.67□□□□□ -1.02
HSPG2-206ENST00000439717 ZNF266Q14584 549 aa8.67□□□□□ -1.02
HSPG2-206ENST00000439717 GUK1Q16774 197 aa8.67□□□□□ -1.02
HSPG2-206ENST00000439717 DEFB135Q30KP9 77 aa8.67□□□□□ -1.02
HSPG2-206ENST00000439717 EBLN2Q6P2I7 272 aa8.67□□□□□ -1.02
HSPG2-206ENST00000439717 LCN15Q6UWW0 184 aa8.67□□□□□ -1.02
HSPG2-206ENST00000439717 LRRC20Q8TCA0 184 aa8.67□□□□□ -1.02
HSPG2-206ENST00000439717 CLUHP3Q96NS8 147 aa8.67□□□□□ -1.02
HSPG2-206ENST00000439717 HRH4Q9H3N8 390 aa8.67□□□□□ -1.02
HSPG2-206ENST00000439717 TNFSF18Q9UNG2 199 aa8.67□□□□□ -1.02
HSPG2-206ENST00000439717 NBEAL2Q6ZNJ1 2754 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 FXYD6-FXYD2A0A087WZ82 144 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 TRAV8-2A0A0B4J237 113 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 TRAV5A0A0B4J249 113 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 IGLC2P0DOY2 106 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 FAM78BQ5VT40 261 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 C20orf173Q96LM9 149 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 MRPL32Q9BYC8 188 aaKnown RBP8.66□□□□□ -1.02
HSPG2-206ENST00000439717 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 CLEC5AQ9NY25 188 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 TMEM14CQ9P0S9 112 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 TIMM9Q9Y5J7 89 aa8.66□□□□□ -1.02
HSPG2-206ENST00000439717 A0A0J9YX75 114 aa8.65□□□□□ -1.02
HSPG2-206ENST00000439717 G3V3Q6 166 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms