RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 IL4P05112 153 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 COX8AP10176 69 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 SEC11AP67812 179 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 RPRMLQ8N4K4 120 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 ZADH2Q8N4Q0 377 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 C1orf162Q8NEQ5 155 aaPredicted RBP7.27□□□□□ -1.25
COPB1-202ENST00000439561 SLC25A15Q9Y619 301 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 PPIAL4EA0A075B759 164 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 PPIAL4FP0DN26 164 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 CNTFRP26992 372 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 SMAGPQ0VAQ4 97 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 Q5PR19 223 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 TIMM23BQ5SRD1 257 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 FAM71F2Q6NXP2 309 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 LINC00312Q9Y6C7 94 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 A0A1B0GXF2 115 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 C22orf46C9J442 243 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 FAM106CPP0CH98 169 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 FAM106AQ4KMX7 169 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 RPEQ96AT9 228 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 C17orf77Q96MU5 243 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 SCNM1Q9BWG6 230 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 GTSF1LQ9H1H1 148 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 PSG8Q9UQ74 426 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 VSTM5A8MXK1 200 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 K7EMI3 77 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 POU2AF1Q16633 256 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 TMEM200BQ69YZ2 307 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 Q71RC1 249 aaPredicted RBP7.26□□□□□ -1.25
COPB1-202ENST00000439561 MTURNQ8N3F0 131 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 TMEM167AQ8TBQ9 72 aa7.26□□□□□ -1.25
COPB1-202ENST00000439561 TMEM238C9JI98 176 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 TM4SF5O14894 197 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 IGHV3-23P01764 117 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 PPBPP02775 128 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 PPIFP30405 207 aaKnown RBP7.25□□□□□ -1.25
COPB1-202ENST00000439561 LOXL1Q08397 574 aaPredicted RBP7.25□□□□□ -1.25
COPB1-202ENST00000439561 ZNF788Q6ZQV5 615 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 RITA1Q96K30 269 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 ZNF747Q9BV97 191 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 COL25A1Q9BXS0 654 aaPredicted RBP7.25□□□□□ -1.25
COPB1-202ENST00000439561 SLC25A39Q9BZJ4 359 aaPredicted RBP7.25□□□□□ -1.25
COPB1-202ENST00000439561 OTORQ9NRC9 128 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 NHP2Q9NX24 153 aaKnown RBP7.25□□□□□ -1.25
COPB1-202ENST00000439561 DSCAMO60469 2012 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 EVI2AP22794 236 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 RHOGP84095 191 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 LYZL1Q6UWQ5 148 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 PCP2Q8IVA1 136 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 ORMDL3Q8N138 153 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 C8orf46Q8TAG6 207 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 TMEM186Q96B77 213 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 IFI27L1Q96BM0 104 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 NDFIP1Q9BT67 221 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 TTTY13Q9BZ97 58 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 IGKV1D-37A0A075B6S9 117 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 IGLC1P0CG04 106 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 PAX2Q02962 417 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 KLF17Q5JT82 389 aaPredicted RBP7.25□□□□□ -1.25
COPB1-202ENST00000439561 FAM120AOSQ5T036 256 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 SAMD13Q5VXD3 122 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 IGFL4Q6B9Z1 124 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 TMEM108Q6UXF1 575 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 NEU4Q8WWR8 484 aaPredicted RBP7.25□□□□□ -1.25
COPB1-202ENST00000439561 TMEM133Q9H2Q1 129 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 PLSCR4Q9NRQ2 329 aa7.25□□□□□ -1.25
COPB1-202ENST00000439561 MC5RP33032 325 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 FOXE3Q13461 319 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 RUSC1-AS1Q66K80 236 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 LYPD2Q6UXB3 125 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 HIF1ANQ9NWT6 349 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 TMEM160Q9NX00 188 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 UFC1Q9Y3C8 167 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 PIEZO2Q9H5I5 2752 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 C9orf118A6NHY6 69 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 K7ERJ3 54 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 ZNF207O43670 478 aaKnown RBP7.24□□□□□ -1.25
COPB1-202ENST00000439561 LTAP01374 205 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 SP9P0CG40 484 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 MEF2CQ06413 473 aaPredicted RBP7.24□□□□□ -1.25
COPB1-202ENST00000439561 HSD52Q0P140 79 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 ZNF474Q6S9Z5 364 aaPredicted RBP7.24□□□□□ -1.25
COPB1-202ENST00000439561 BCL6BQ8N143 479 aaPredicted RBP7.24□□□□□ -1.25
COPB1-202ENST00000439561 Q8TAT8 98 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 C8orf49Q96NF6 230 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 TTC28Q96AY4 2481 aa7.24□□□□□ -1.25
COPB1-202ENST00000439561 CGB1A6NKQ9 187 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 SMAD7O15105 426 aaKnown RBP7.23□□□□□ -1.25
COPB1-202ENST00000439561 IGLV1-44P01699 117 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 HBDP02042 147 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 SFTA2Q6UW10 78 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 NGBQ9NPG2 151 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 SIGLEC8Q9NYZ4 499 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 COL6A3P12111 3177 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 IGKV2-40A0A087WW87 121 aaPredicted RBP7.23□□□□□ -1.25
COPB1-202ENST00000439561 NPIPB5A8MRT5 1133 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 J3KRW8 73 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 IGKV2D-40P01614 121 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms