RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CAMLGP49069 296 aa11.9□□□□□ -0.5
SMPD4-207ENST00000435455 NUTF2P61970 127 aaKnown RBP11.9□□□□□ -0.5
SMPD4-207ENST00000435455 VWC2Q2TAL6 325 aa11.9□□□□□ -0.5
SMPD4-207ENST00000435455 C16orf92Q96LL3 132 aa11.9□□□□□ -0.5
SMPD4-207ENST00000435455 LINC00052Q96N35 136 aa11.9□□□□□ -0.5
SMPD4-207ENST00000435455 MGST2Q99735 147 aa11.9□□□□□ -0.5
SMPD4-207ENST00000435455 RARRES2Q99969 163 aa11.9□□□□□ -0.5
SMPD4-207ENST00000435455 SLC25A31Q9H0C2 315 aa11.9□□□□□ -0.5
SMPD4-207ENST00000435455 WDR83OSQ9Y284 106 aa11.9□□□□□ -0.5
SMPD4-207ENST00000435455 HLA-DRB4X5D2U9 266 aa11.9□□□□□ -0.5
SMPD4-207ENST00000435455 A0A0J9YWU9 116 aa11.89□□□□□ -0.51
SMPD4-207ENST00000435455 H3BMM0 161 aa11.89□□□□□ -0.51
SMPD4-207ENST00000435455 ATF4P18848 351 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-207ENST00000435455 H2BFSP57053 126 aa11.89□□□□□ -0.51
SMPD4-207ENST00000435455 SPATA31B1PQ5VZV4 182 aa11.89□□□□□ -0.51
SMPD4-207ENST00000435455 UHRF2Q96PU4 802 aa11.89□□□□□ -0.51
SMPD4-207ENST00000435455 ARV1Q9H2C2 271 aa11.89□□□□□ -0.51
SMPD4-207ENST00000435455 RPRMQ9NS64 109 aa11.89□□□□□ -0.51
SMPD4-207ENST00000435455 ELOA3CA0A087WX78 387 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-207ENST00000435455 COX7A2P2O60397 106 aa11.88□□□□□ -0.51
SMPD4-207ENST00000435455 GIG44P09565 113 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-207ENST00000435455 LRRC37A5PQ49AS3 106 aa11.88□□□□□ -0.51
SMPD4-207ENST00000435455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.88□□□□□ -0.51
SMPD4-207ENST00000435455 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
SMPD4-207ENST00000435455 FOXI2Q6ZQN5 318 aa11.88□□□□□ -0.51
SMPD4-207ENST00000435455 OR11H2Q8NH07 326 aa11.88□□□□□ -0.51
SMPD4-207ENST00000435455 C1QTNF4Q9BXJ3 329 aa11.88□□□□□ -0.51
SMPD4-207ENST00000435455 UBE2L5PA0A1B0GUS4 154 aa11.87□□□□□ -0.51
SMPD4-207ENST00000435455 MPDU1O75352 247 aa11.87□□□□□ -0.51
SMPD4-207ENST00000435455 PET100P0DJ07 73 aa11.87□□□□□ -0.51
SMPD4-207ENST00000435455 BAXQ07812 192 aa11.87□□□□□ -0.51
SMPD4-207ENST00000435455 Q6ZRG5 221 aa11.87□□□□□ -0.51
SMPD4-207ENST00000435455 CHAC2Q8WUX2 184 aa11.87□□□□□ -0.51
SMPD4-207ENST00000435455 PPP1R1CQ8WVI7 109 aa11.87□□□□□ -0.51
SMPD4-207ENST00000435455 CLUHP3Q96NS8 147 aa11.87□□□□□ -0.51
SMPD4-207ENST00000435455 SAV1Q9H4B6 383 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-207ENST00000435455 OR5AC2Q9NZP5 309 aa11.87□□□□□ -0.51
SMPD4-207ENST00000435455 H0YIZ8 118 aa11.86□□□□□ -0.51
SMPD4-207ENST00000435455 C4BPBP20851 252 aa11.86□□□□□ -0.51
SMPD4-207ENST00000435455 RPL29P47914 159 aaKnown RBP11.86□□□□□ -0.51
SMPD4-207ENST00000435455 EWSR1Q01844 656 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMPD4-207ENST00000435455 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
SMPD4-207ENST00000435455 EBLN2Q6P2I7 272 aa11.86□□□□□ -0.51
SMPD4-207ENST00000435455 LINC00305Q7Z4B0 112 aa11.86□□□□□ -0.51
SMPD4-207ENST00000435455 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
SMPD4-207ENST00000435455 C17orf77Q96MU5 243 aa11.86□□□□□ -0.51
SMPD4-207ENST00000435455 C11orf68Q9H3H3 251 aaKnown RBP11.86□□□□□ -0.51
SMPD4-207ENST00000435455 STARD9Q9P2P6 4700 aa11.86□□□□□ -0.51
SMPD4-207ENST00000435455 A0A087X0K7 114 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 FGF7P21781 194 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 PRR20EP86478 221 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 PRR20CP86479 221 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 PRR20DP86480 221 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 PRR20BP86481 221 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 PRR20AP86496 221 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 NHLH2Q02577 135 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 FGL1Q08830 312 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 OPCMLQ14982 345 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 MIC13Q5XKP0 118 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 PFDN5Q99471 154 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 ALG5Q9Y673 324 aa11.85□□□□□ -0.51
SMPD4-207ENST00000435455 A0A0J9YX75 114 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 MPC2O95563 127 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 DEFB1P60022 68 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 B2MP61769 119 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 GDF5OSQ5U4N7 250 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 BPIFA4PQ86YQ2 179 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 OR5C1Q8NGR4 320 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 LRRC20Q8TCA0 184 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 TMEM37Q8WXS4 190 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 SLC39A9Q9NUM3 307 aa11.84□□□□□ -0.51
SMPD4-207ENST00000435455 CXCL2P19875 107 aa11.83□□□□□ -0.52
SMPD4-207ENST00000435455 CSNK1G2-AS1Q8NCQ2 148 aa11.83□□□□□ -0.52
SMPD4-207ENST00000435455 OR4B1Q8NGF8 309 aa11.83□□□□□ -0.52
SMPD4-207ENST00000435455 C20orf173Q96LM9 149 aa11.83□□□□□ -0.52
SMPD4-207ENST00000435455 RNF126Q9BV68 326 aa11.83□□□□□ -0.52
SMPD4-207ENST00000435455 CLEC5AQ9NY25 188 aa11.83□□□□□ -0.52
SMPD4-207ENST00000435455 XCL2Q9UBD3 114 aa11.83□□□□□ -0.52
SMPD4-207ENST00000435455 PXMP4Q9Y6I8 212 aa11.83□□□□□ -0.52
SMPD4-207ENST00000435455 ZNF705EA8MWA4 302 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-207ENST00000435455 MRPS12O15235 138 aaKnown RBP11.82□□□□□ -0.52
SMPD4-207ENST00000435455 DUSP14O95147 198 aaKnown RBP11.82□□□□□ -0.52
SMPD4-207ENST00000435455 IGKV3-20P01619 116 aa11.82□□□□□ -0.52
SMPD4-207ENST00000435455 MIFP14174 115 aa11.82□□□□□ -0.52
SMPD4-207ENST00000435455 PSG9Q00887 426 aa11.82□□□□□ -0.52
SMPD4-207ENST00000435455 CLINT1Q14677 625 aa11.82□□□□□ -0.52
SMPD4-207ENST00000435455 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
SMPD4-207ENST00000435455 LCN15Q6UWW0 184 aa11.82□□□□□ -0.52
SMPD4-207ENST00000435455 NPCDR1Q9BY65 106 aa11.82□□□□□ -0.52
SMPD4-207ENST00000435455 TRAV8-2A0A0B4J237 113 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 CXorf65A6NEN9 183 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 A8MTW9 85 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 F6UB75 175 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 RNF182Q8N6D2 247 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 ZNF709Q8N972 641 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 Q8NAQ8 132 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 ZNF738Q8NE65 137 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 THAP6Q8TBB0 222 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 MED28Q9H204 178 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms