RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ST6GAL2Q96JF0 529 aa13.54□□□□□ -0.24
HLA-F-220ENST00000434407 SCRT1Q9BWW7 348 aa13.54□□□□□ -0.24
HLA-F-220ENST00000434407 MBD2Q9UBB5 411 aa13.54□□□□□ -0.24
HLA-F-220ENST00000434407 UBE2CO00762 179 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 MPDU1O75352 247 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 OR5G3P0C626 314 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 GALR1P47211 349 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 SNRPD3P62318 126 aaKnown RBP13.53□□□□□ -0.24
HLA-F-220ENST00000434407 OPCMLQ14982 345 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 S100A7AQ86SG5 101 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 ASB13Q8WXK3 278 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 TMEM37Q8WXS4 190 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 WWC2-AS2Q96NR7 200 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 UHRF2Q96PU4 802 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 ARV1Q9H2C2 271 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 SLC25A22Q9H936 323 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 HSPB11Q9Y547 144 aa13.53□□□□□ -0.24
HLA-F-220ENST00000434407 ELOA3CA0A087WX78 387 aaPredicted RBP13.52□□□□□ -0.25
HLA-F-220ENST00000434407 RPL35AP18077 110 aaKnown RBP13.52□□□□□ -0.25
HLA-F-220ENST00000434407 CD300CQ08708 224 aa13.52□□□□□ -0.25
HLA-F-220ENST00000434407 MIC13Q5XKP0 118 aa13.52□□□□□ -0.25
HLA-F-220ENST00000434407 Q6ZWC4 215 aa13.52□□□□□ -0.25
HLA-F-220ENST00000434407 RETNQ9HD89 108 aa13.52□□□□□ -0.25
HLA-F-220ENST00000434407 GIPP09681 153 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-220ENST00000434407 FGF7P21781 194 aa13.51□□□□□ -0.25
HLA-F-220ENST00000434407 RPL12P30050 165 aaKnown RBP13.51□□□□□ -0.25
HLA-F-220ENST00000434407 PSMB3P49720 205 aa13.51□□□□□ -0.25
HLA-F-220ENST00000434407 MEOX2P50222 304 aa13.51□□□□□ -0.25
HLA-F-220ENST00000434407 PSMG4Q5JS54 123 aa13.51□□□□□ -0.25
HLA-F-220ENST00000434407 SAMD13Q5VXD3 122 aa13.51□□□□□ -0.25
HLA-F-220ENST00000434407 NPCDR1Q9BY65 106 aa13.51□□□□□ -0.25
HLA-F-220ENST00000434407 DNAJC4Q9NNZ3 241 aa13.51□□□□□ -0.25
HLA-F-220ENST00000434407 RNF24Q9Y225 148 aa13.51□□□□□ -0.25
HLA-F-220ENST00000434407 ISLRO14498 428 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 MRPS12O15235 138 aaKnown RBP13.5□□□□□ -0.25
HLA-F-220ENST00000434407 RPL7P18124 248 aaKnown RBP13.5□□□□□ -0.25
HLA-F-220ENST00000434407 B2MP61769 119 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 CLINT1Q14677 625 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 Q6ZRG5 221 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 LINC00305Q7Z4B0 112 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 TRPT1Q86TN4 253 aaKnown RBP13.5□□□□□ -0.25
HLA-F-220ENST00000434407 TCTE3Q8IZS6 198 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 OVOL2Q9BRP0 275 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 RSG1Q9BU20 258 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 CSTL1Q9H114 145 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 SLC39A9Q9NUM3 307 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 TP53TG1Q9Y2A0 90 aa13.5□□□□□ -0.25
HLA-F-220ENST00000434407 COX7A2P2O60397 106 aa13.49□□□□□ -0.25
HLA-F-220ENST00000434407 ID1P41134 155 aa13.49□□□□□ -0.25
HLA-F-220ENST00000434407 STHQ8IWL8 128 aa13.49□□□□□ -0.25
HLA-F-220ENST00000434407 THAP6Q8TBB0 222 aa13.49□□□□□ -0.25
HLA-F-220ENST00000434407 ATP5SQ99766 215 aa13.49□□□□□ -0.25
HLA-F-220ENST00000434407 WDR61Q9GZS3 305 aaKnown RBP13.49□□□□□ -0.25
HLA-F-220ENST00000434407 A0A087X0K7 114 aa13.48□□□□□ -0.25
HLA-F-220ENST00000434407 KNCNA6PVL3 124 aa13.48□□□□□ -0.25
HLA-F-220ENST00000434407 MORN5Q5VZ52 161 aa13.48□□□□□ -0.25
HLA-F-220ENST00000434407 C10orf113Q5VZT2 155 aa13.48□□□□□ -0.25
HLA-F-220ENST00000434407 OR1L4Q8NGR5 311 aa13.48□□□□□ -0.25
HLA-F-220ENST00000434407 EDA2RQ9HAV5 297 aa13.48□□□□□ -0.25
HLA-F-220ENST00000434407 PXMP4Q9Y6I8 212 aa13.48□□□□□ -0.25
HLA-F-220ENST00000434407 BOLA2-SMG1P6H3BVE0 249 aa13.47□□□□□ -0.25
HLA-F-220ENST00000434407 GIG44P09565 113 aaPredicted RBP13.47□□□□□ -0.25
HLA-F-220ENST00000434407 FGL1Q08830 312 aa13.47□□□□□ -0.25
HLA-F-220ENST00000434407 Q5BKY6 102 aa13.47□□□□□ -0.25
HLA-F-220ENST00000434407 ACTL10Q5JWF8 245 aa13.47□□□□□ -0.25
HLA-F-220ENST00000434407 GATAD1Q8WUU5 269 aa13.47□□□□□ -0.25
HLA-F-220ENST00000434407 RNF183Q96D59 192 aa13.47□□□□□ -0.25
HLA-F-220ENST00000434407 PFDN5Q99471 154 aa13.47□□□□□ -0.25
HLA-F-220ENST00000434407 PARD6GQ9BYG4 376 aaPredicted RBP13.47□□□□□ -0.25
HLA-F-220ENST00000434407 H3BMM0 161 aa13.46□□□□□ -0.25
HLA-F-220ENST00000434407 DEFB135Q30KP9 77 aa13.46□□□□□ -0.25
HLA-F-220ENST00000434407 C16orf92Q96LL3 132 aa13.46□□□□□ -0.25
HLA-F-220ENST00000434407 C20orf173Q96LM9 149 aa13.46□□□□□ -0.25
HLA-F-220ENST00000434407 TRAV8-2A0A0B4J237 113 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 SPRY2O43597 315 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 SPP1P10451 314 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 HLA-DRB4P13762 266 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 ATF4P18848 351 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-220ENST00000434407 ZFP69Q49AA0 526 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 FOXI2Q6ZQN5 318 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 BPIFA4PQ86YQ2 179 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 LINC00052Q96N35 136 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 CLUHP3Q96NS8 147 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 AQP10Q96PS8 301 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 SAV1Q9H4B6 383 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-220ENST00000434407 WFDC1Q9HC57 220 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 HLA-DRB4X5D2U9 266 aa13.45□□□□□ -0.26
HLA-F-220ENST00000434407 CSMD3Q7Z407 3707 aa13.44□□□□□ -0.26
HLA-F-220ENST00000434407 C1QBP02746 253 aa13.44□□□□□ -0.26
HLA-F-220ENST00000434407 CXCL2P19875 107 aa13.44□□□□□ -0.26
HLA-F-220ENST00000434407 SPATA31B1PQ5VZV4 182 aa13.44□□□□□ -0.26
HLA-F-220ENST00000434407 MORN3Q6PF18 240 aaPredicted RBP13.44□□□□□ -0.26
HLA-F-220ENST00000434407 OR2T35Q8NGX2 323 aa13.44□□□□□ -0.26
HLA-F-220ENST00000434407 KCNIP2Q9NS61 270 aa13.44□□□□□ -0.26
HLA-F-220ENST00000434407 G3V3Q6 166 aa13.43□□□□□ -0.26
HLA-F-220ENST00000434407 SMLR1H3BR10 107 aa13.43□□□□□ -0.26
HLA-F-220ENST00000434407 CA1P00915 261 aaPredicted RBP13.43□□□□□ -0.26
HLA-F-220ENST00000434407 DEFB1P60022 68 aa13.43□□□□□ -0.26
HLA-F-220ENST00000434407 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms