RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CRYBB3P26998 211 aa13.96□□□□□ -0.17
HMGN1-206ENST00000431390 UBE2L3P68036 154 aaKnown RBP13.96□□□□□ -0.17
HMGN1-206ENST00000431390 SRSF3P84103 164 aaKnown RBP13.96□□□□□ -0.17
HMGN1-206ENST00000431390 RPEL1Q2QD12 228 aa13.96□□□□□ -0.17
HMGN1-206ENST00000431390 KHDC1LQ5JSQ8 128 aa13.96□□□□□ -0.17
HMGN1-206ENST00000431390 LEMD1Q68G75 181 aa13.96□□□□□ -0.17
HMGN1-206ENST00000431390 BPIFA4PQ86YQ2 179 aa13.96□□□□□ -0.17
HMGN1-206ENST00000431390 RARRES2Q99969 163 aa13.96□□□□□ -0.17
HMGN1-206ENST00000431390 IGHV4OR15-8A0A075B7B6 117 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 IGHV3OR16-8A0A075B7F1 116 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 A0A087WW49 117 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 PYYP10082 97 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 CD28P10747 220 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 NPPCP23582 126 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 ICAM4Q14773 271 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 AWAT1Q58HT5 328 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 UNQ9165/PRO28630Q6UXU0 137 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 FXYD5Q96DB9 178 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 TXNDC17Q9BRA2 123 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 C20orf24Q9BUV8 137 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 TMEM231Q9H6L2 316 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 TREM1Q9NP99 234 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 U3KQE9 123 aa13.96□□□□□ -0.18
HMGN1-206ENST00000431390 PAGE4O60829 102 aa13.95□□□□□ -0.18
HMGN1-206ENST00000431390 NDUFS6O75380 124 aaKnown RBP13.95□□□□□ -0.18
HMGN1-206ENST00000431390 OR10J4P0C629 311 aa13.95□□□□□ -0.18
HMGN1-206ENST00000431390 ZP3P21754 424 aa13.95□□□□□ -0.18
HMGN1-206ENST00000431390 KLHL30-AS1Q8NEE0 82 aa13.95□□□□□ -0.18
HMGN1-206ENST00000431390 TSSC4Q9Y5U2 329 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-206ENST00000431390 K7EMT4 169 aa13.94□□□□□ -0.18
HMGN1-206ENST00000431390 BUB3O43684 328 aa13.94□□□□□ -0.18
HMGN1-206ENST00000431390 MEF2BQ02080 365 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-206ENST00000431390 C1orf194Q5T5A4 169 aa13.94□□□□□ -0.18
HMGN1-206ENST00000431390 C18orf65Q6ZTR6 163 aa13.94□□□□□ -0.18
HMGN1-206ENST00000431390 REC114Q7Z4M0 266 aa13.94□□□□□ -0.18
HMGN1-206ENST00000431390 NARS2Q96I59 477 aaKnown RBP13.94□□□□□ -0.18
HMGN1-206ENST00000431390 ZNF320A2RRD8 509 aa13.93□□□□□ -0.18
HMGN1-206ENST00000431390 LGALS9O00182 355 aa13.93□□□□□ -0.18
HMGN1-206ENST00000431390 MRPS12O15235 138 aaKnown RBP13.93□□□□□ -0.18
HMGN1-206ENST00000431390 HIST1H1EP10412 219 aaKnown RBP13.93□□□□□ -0.18
HMGN1-206ENST00000431390 RPL7P18124 248 aaKnown RBP13.93□□□□□ -0.18
HMGN1-206ENST00000431390 OR4F17Q8NGA8 305 aa13.93□□□□□ -0.18
HMGN1-206ENST00000431390 RXFP4Q8TDU9 374 aa13.93□□□□□ -0.18
HMGN1-206ENST00000431390 GPR82Q96P67 336 aa13.93□□□□□ -0.18
HMGN1-206ENST00000431390 OR4F4Q96R69 305 aa13.93□□□□□ -0.18
HMGN1-206ENST00000431390 DAZ1Q9NQZ3 744 aaKnown RBP13.93□□□□□ -0.18
HMGN1-206ENST00000431390 UFC1Q9Y3C8 167 aa13.93□□□□□ -0.18
HMGN1-206ENST00000431390 A0A1W2PRE2 83 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 FAM74A7A6NL05 159 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 LINC01619G3V211 115 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 ZNF207O43670 478 aaKnown RBP13.92□□□□□ -0.18
HMGN1-206ENST00000431390 S100A1P23297 94 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 HOXD3P31249 432 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-206ENST00000431390 UBE2G2P60604 165 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 PRR31Q5SQ13 230 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 OR8I2Q8N0Y5 310 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 CITED2Q99967 270 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-206ENST00000431390 TMEM218A2RU14 115 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 A8MWP6 167 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 C9JQL5 133 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 NBEAP1P0C6P0 100 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 IGLC2P0DOY2 106 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 FOXL1Q12952 345 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 OR11H1Q8NG94 326 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 OR1N2Q8NGR9 330 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 DPF1Q92782 380 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 SLC35B3Q9H1N7 401 aa13.92□□□□□ -0.18
HMGN1-206ENST00000431390 YTHDF2Q9Y5A9 579 aaKnown RBP13.92□□□□□ -0.18
HMGN1-206ENST00000431390 A0A1W2PS18 150 aa13.91□□□□□ -0.18
HMGN1-206ENST00000431390 KRBOX1C9JBD0 128 aa13.91□□□□□ -0.18
HMGN1-206ENST00000431390 C11orf94C9JXX5 98 aa13.91□□□□□ -0.18
HMGN1-206ENST00000431390 SRP19P09132 144 aaKnown RBP13.91□□□□□ -0.18
HMGN1-206ENST00000431390 CD81P60033 236 aa13.91□□□□□ -0.18
HMGN1-206ENST00000431390 CST9LP1Q5W188 147 aa13.91□□□□□ -0.18
HMGN1-206ENST00000431390 C1QL4Q86Z23 238 aa13.91□□□□□ -0.18
HMGN1-206ENST00000431390 C11orf44Q8N8P7 122 aa13.91□□□□□ -0.18
HMGN1-206ENST00000431390 NKX6-2Q9C056 277 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-206ENST00000431390 APOHP02749 345 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-206ENST00000431390 KLF5Q13887 457 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-206ENST00000431390 DEFB136Q30KP8 78 aa13.9□□□□□ -0.18
HMGN1-206ENST00000431390 C16orf54Q6UWD8 224 aa13.9□□□□□ -0.18
HMGN1-206ENST00000431390 C8orf86Q6ZUL3 223 aa13.9□□□□□ -0.18
HMGN1-206ENST00000431390 GRAMD2BQ96HH9 432 aa13.9□□□□□ -0.18
HMGN1-206ENST00000431390 ZNF586Q9NXT0 402 aa13.9□□□□□ -0.18
HMGN1-206ENST00000431390 IGHV7-4-1A0A0J9YVY3 117 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 TMEM250H0YL14 139 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 H3BQ15 152 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 PDE6DO43924 150 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 SFTA3P0C7M3 94 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 ATP5G3P48201 142 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 TM4SF20Q53R12 229 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 BLNKQ8WV28 456 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 ZNF747Q9BV97 191 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 PKD1L1Q8TDX9 2849 aa13.89□□□□□ -0.19
HMGN1-206ENST00000431390 TRBV19A0A075B6N1 114 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 BMI1P35226 326 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 GALR1P47211 349 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 SYNJ2BPP57105 145 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 FHL3Q13643 280 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 PDE6HQ13956 83 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms