RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TCTEX1D4Q5JR98 221 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 FAM24BQ8N5W8 94 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 Q8N6K4 173 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 C5orf56Q8N8D9 126 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 TMEM116Q8NCL8 245 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 C11orf52Q96A22 123 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 ISOC2Q96AB3 205 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 TRGV9Q99603 122 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 PYGO2Q9BRQ0 406 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 FNDC4Q9H6D8 234 aaPredicted RBP6.72□□□□□ -1.33
HDAC1-202ENST00000428704 METTL1Q9UBP6 276 aaKnown RBP6.72□□□□□ -1.33
HDAC1-202ENST00000428704 ZMAT5Q9UDW3 170 aaKnown RBP6.72□□□□□ -1.33
HDAC1-202ENST00000428704 MOB4Q9Y3A3 225 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 LY96Q9Y6Y9 160 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 ABCA13Q86UQ4 5058 aa6.72□□□□□ -1.33
HDAC1-202ENST00000428704 IGKV1D-37A0A075B6S9 117 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 IGHV3-72A0A0B4J1Y9 119 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 TEX22C9J3V5 150 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 MOSP00540 346 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 FAM106CPP0CH98 169 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 C8orf88P0DMB2 117 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 TMEM11P17152 192 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 PLP1P60201 277 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 GNB1P62873 340 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 SSBP2P81877 361 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-202ENST00000428704 TNXAQ16473 311 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 C10orf55Q5SWW7 151 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 FAM78BQ5VT40 261 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 OR1L4Q8NGR5 311 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 PFDN5Q99471 154 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 DNAJC4Q9NNZ3 241 aa6.71□□□□□ -1.34
HDAC1-202ENST00000428704 F11RQ9Y624 299 aaKnown RBP6.71□□□□□ -1.34
HDAC1-202ENST00000428704 A0A1W2PRE2 83 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 C5orf52A6NGY3 159 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 M0QZK8 103 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 NBR2O15453 112 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 EIF3GO75821 320 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC1-202ENST00000428704 PFN1P07737 140 aaKnown RBP6.7□□□□□ -1.34
HDAC1-202ENST00000428704 DEFA4P12838 97 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 CNTFRP26992 372 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 HES1Q14469 280 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 MIR17HGQ75NE6 70 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 STXBP6Q8NFX7 210 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 OR5AU1Q8NGC0 362 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 OR2T10Q8NGZ9 312 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 Q8WTZ3 238 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 SRSF12Q8WXF0 261 aaKnown RBP6.7□□□□□ -1.34
HDAC1-202ENST00000428704 TMEM37Q8WXS4 190 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 TMEM190Q8WZ59 177 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 NPIPB3Q92617 1050 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 ZNF503Q96F45 646 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 UHRF2Q96PU4 802 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 IMMP2LQ96T52 175 aa6.7□□□□□ -1.34
HDAC1-202ENST00000428704 C9JCJ5 164 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 PPP1R2P9O14990 202 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 IGHG2P01859 326 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 ATP5G3P48201 142 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 MFAP2P55001 183 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 KLK9Q2XQG4 91 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 SMUG1Q53HV7 270 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 C9orf152Q5JTZ5 239 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 SPATA31B1PQ5VZV4 182 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 CST9LP1Q5W188 147 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 ZNF562Q6V9R5 426 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 LINC01551Q86U37 167 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 IQCF2Q8IXL9 164 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 Q8N9W7 124 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 OR51G1Q8NGK1 321 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 RPUSD4Q96CM3 377 aaKnown RBP6.69□□□□□ -1.34
HDAC1-202ENST00000428704 BTF3L4Q96K17 158 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 FAM167A-AS1Q96KT0 104 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 NOL4LQ96MY1 436 aaPredicted RBP6.69□□□□□ -1.34
HDAC1-202ENST00000428704 TCEAL7Q9BRU2 100 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 FBXL15Q9H469 300 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 KLK9Q9UKQ9 250 aa6.69□□□□□ -1.34
HDAC1-202ENST00000428704 LINC01548A6NM66 108 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 I3L2K1 104 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 FCN1O00602 326 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 NDUFB4O95168 129 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 CXCL1P09341 107 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 ADIRFQ15847 76 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 C5orf64Q2M2E5 130 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 ZNF674Q2M3X9 581 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 C10orf113Q5VZT2 155 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 PATE2Q6UY27 113 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 OR4X1Q8NH49 305 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 ACY3Q96HD9 319 aa6.68□□□□□ -1.34
HDAC1-202ENST00000428704 MCRIP2Q9BUT9 160 aaKnown RBP6.68□□□□□ -1.34
HDAC1-202ENST00000428704 MRPL36Q9P0J6 103 aaKnown RBP6.68□□□□□ -1.34
HDAC1-202ENST00000428704 YTHDF2Q9Y5A9 579 aaKnown RBP6.68□□□□□ -1.34
HDAC1-202ENST00000428704 NPIPB5A8MRT5 1133 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 H7BYZ3 331 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 UBE2CO00762 179 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 TYMSP04818 313 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 GATA2P23769 480 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-202ENST00000428704 S100PP25815 95 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 RPS10P46783 165 aaKnown RBP6.67□□□□□ -1.34
HDAC1-202ENST00000428704 UBE2G2P60604 165 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 MMDQ15546 238 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 ZNF343Q6P1L6 599 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms