RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SLC25A32Q9H2D1 315 aa11.67□□□□□ -0.54
VARS-216ENST00000428445 SLC25A22Q9H936 323 aa11.67□□□□□ -0.54
VARS-216ENST00000428445 M0R2Z0 102 aa11.66□□□□□ -0.54
VARS-216ENST00000428445 TMEM208Q9BTX3 173 aa11.66□□□□□ -0.54
VARS-216ENST00000428445 DOK5Q9P104 306 aa11.66□□□□□ -0.54
VARS-216ENST00000428445 A8MTW9 85 aa11.65□□□□□ -0.54
VARS-216ENST00000428445 NOL3O60936 208 aaKnown RBP11.65□□□□□ -0.54
VARS-216ENST00000428445 AZU1P20160 251 aa11.65□□□□□ -0.54
VARS-216ENST00000428445 B2MP61769 119 aa11.65□□□□□ -0.54
VARS-216ENST00000428445 SPINK13Q1W4C9 94 aa11.65□□□□□ -0.54
VARS-216ENST00000428445 SOHLH1Q5JUK2 328 aa11.65□□□□□ -0.54
VARS-216ENST00000428445 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.54
VARS-216ENST00000428445 TOMM5Q8N4H5 51 aa11.65□□□□□ -0.54
VARS-216ENST00000428445 OR1B1Q8NGR6 318 aa11.65□□□□□ -0.54
VARS-216ENST00000428445 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
VARS-216ENST00000428445 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
VARS-216ENST00000428445 SYNGR2O43760 224 aa11.64□□□□□ -0.55
VARS-216ENST00000428445 DEFB130BP0DP73 79 aa11.64□□□□□ -0.55
VARS-216ENST00000428445 DEFB130AP0DP74 79 aa11.64□□□□□ -0.55
VARS-216ENST00000428445 RNF182Q8N6D2 247 aa11.64□□□□□ -0.55
VARS-216ENST00000428445 BPIFCQ8NFQ6 507 aa11.64□□□□□ -0.55
VARS-216ENST00000428445 MCFD2Q8NI22 146 aa11.64□□□□□ -0.55
VARS-216ENST00000428445 IGF2BP2-AS1Q96M15 143 aa11.64□□□□□ -0.55
VARS-216ENST00000428445 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
VARS-216ENST00000428445 TRAV8-2A0A0B4J237 113 aa11.63□□□□□ -0.55
VARS-216ENST00000428445 PRSS46E5RG02 174 aa11.63□□□□□ -0.55
VARS-216ENST00000428445 DUSP14O95147 198 aaKnown RBP11.63□□□□□ -0.55
VARS-216ENST00000428445 ORM2P19652 201 aa11.63□□□□□ -0.55
VARS-216ENST00000428445 CNN1P51911 297 aaKnown RBP11.63□□□□□ -0.55
VARS-216ENST00000428445 TMED4Q7Z7H5 227 aa11.63□□□□□ -0.55
VARS-216ENST00000428445 S100A7AQ86SG5 101 aa11.63□□□□□ -0.55
VARS-216ENST00000428445 BAP18Q8IXM2 172 aa11.63□□□□□ -0.55
VARS-216ENST00000428445 OR11H7Q8NGC8 314 aa11.63□□□□□ -0.55
VARS-216ENST00000428445 APOBP04114 4563 aaKnown RBP11.62□□□□□ -0.55
VARS-216ENST00000428445 C16orf90A8MZG2 172 aa11.62□□□□□ -0.55
VARS-216ENST00000428445 SFT2D2O95562 160 aa11.62□□□□□ -0.55
VARS-216ENST00000428445 NUDT3O95989 172 aa11.62□□□□□ -0.55
VARS-216ENST00000428445 FAM3BP58499 235 aaPredicted RBP11.62□□□□□ -0.55
VARS-216ENST00000428445 UBE2MP61081 183 aaKnown RBP11.62□□□□□ -0.55
VARS-216ENST00000428445 FGL1Q08830 312 aa11.62□□□□□ -0.55
VARS-216ENST00000428445 ATG101Q9BSB4 218 aa11.62□□□□□ -0.55
VARS-216ENST00000428445 SLC25A39Q9BZJ4 359 aaPredicted RBP11.62□□□□□ -0.55
VARS-216ENST00000428445 RNF24Q9Y225 148 aa11.62□□□□□ -0.55
VARS-216ENST00000428445 F5H768 121 aa11.61□□□□□ -0.55
VARS-216ENST00000428445 H3BMQ9 156 aa11.61□□□□□ -0.55
VARS-216ENST00000428445 WRBO00258 174 aa11.61□□□□□ -0.55
VARS-216ENST00000428445 VAMP1P23763 118 aa11.61□□□□□ -0.55
VARS-216ENST00000428445 PYDC2Q56P42 97 aa11.61□□□□□ -0.55
VARS-216ENST00000428445 TMEM144Q7Z5S9 345 aa11.61□□□□□ -0.55
VARS-216ENST00000428445 TRIM63Q969Q1 353 aa11.61□□□□□ -0.55
VARS-216ENST00000428445 TMEM147Q9BVK8 224 aa11.61□□□□□ -0.55
VARS-216ENST00000428445 STRAPQ9Y3F4 350 aaKnown RBP11.61□□□□□ -0.55
VARS-216ENST00000428445 PLAC8L1A1L4L8 177 aa11.6□□□□□ -0.55
VARS-216ENST00000428445 TSPOP30536 169 aa11.6□□□□□ -0.55
VARS-216ENST00000428445 ID3Q02535 119 aa11.6□□□□□ -0.55
VARS-216ENST00000428445 C15orf53Q8NAA6 179 aa11.6□□□□□ -0.55
VARS-216ENST00000428445 ZNRF2Q8NHG8 242 aa11.6□□□□□ -0.55
VARS-216ENST00000428445 NBDYA0A0U1RRE5 68 aa11.59□□□□□ -0.55
VARS-216ENST00000428445 LYRM9A8MSI8 78 aa11.59□□□□□ -0.55
VARS-216ENST00000428445 H3BP45 60 aa11.59□□□□□ -0.55
VARS-216ENST00000428445 HTN1P15515 57 aa11.59□□□□□ -0.55
VARS-216ENST00000428445 S100A5P33763 92 aa11.59□□□□□ -0.55
VARS-216ENST00000428445 SELENOTP62341 195 aa11.59□□□□□ -0.55
VARS-216ENST00000428445 SPANXN5Q5MJ07 72 aa11.59□□□□□ -0.55
VARS-216ENST00000428445 INSP01308 110 aa11.58□□□□□ -0.56
VARS-216ENST00000428445 HOXB5P09067 269 aa11.58□□□□□ -0.56
VARS-216ENST00000428445 RPL7P18124 248 aaKnown RBP11.58□□□□□ -0.56
VARS-216ENST00000428445 PLP1P60201 277 aa11.58□□□□□ -0.56
VARS-216ENST00000428445 RAP2BP61225 183 aa11.58□□□□□ -0.56
VARS-216ENST00000428445 PPP1R1AQ13522 171 aa11.58□□□□□ -0.56
VARS-216ENST00000428445 C6orf223Q8N319 242 aa11.58□□□□□ -0.56
VARS-216ENST00000428445 MAPKAPK5-AS1Q8N8E1 139 aa11.58□□□□□ -0.56
VARS-216ENST00000428445 LINC00588Q9Y4M8 146 aa11.58□□□□□ -0.56
VARS-216ENST00000428445 FNDC10F2Z333 226 aa11.57□□□□□ -0.56
VARS-216ENST00000428445 IL5P05113 134 aa11.57□□□□□ -0.56
VARS-216ENST00000428445 AKR1C1Q04828 323 aa11.57□□□□□ -0.56
VARS-216ENST00000428445 ZNF738Q8NE65 137 aa11.57□□□□□ -0.56
VARS-216ENST00000428445 LINC01587Q99440 93 aa11.57□□□□□ -0.56
VARS-216ENST00000428445 V9GYH0 126 aa11.57□□□□□ -0.56
VARS-216ENST00000428445 DNAH5Q8TE73 4624 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 HYPMO75409 117 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 SNRPCP09234 159 aaKnown RBP11.56□□□□□ -0.56
VARS-216ENST00000428445 RHOBP62745 196 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 C4orf46Q504U0 113 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 CYP2G1PQ6ZSU1 146 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 CCDC190Q86UF4 302 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 TMEM256Q8N2U0 113 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 RNF141Q8WVD5 230 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 SMIM8Q96KF7 97 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 UHRF2Q96PU4 802 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 SHANK2-AS3Q9BTD1 123 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 NPVFQ9HCQ7 196 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 HIGD1AQ9Y241 93 aa11.56□□□□□ -0.56
VARS-216ENST00000428445 NAP1L6A6NFF2 107 aa11.55□□□□□ -0.56
VARS-216ENST00000428445 H3BRN7 92 aa11.55□□□□□ -0.56
VARS-216ENST00000428445 HIST1H1AQ02539 215 aaPredicted RBP11.55□□□□□ -0.56
VARS-216ENST00000428445 KIR3DS1Q14943 382 aa11.55□□□□□ -0.56
VARS-216ENST00000428445 PXDC1Q5TGL8 231 aa11.55□□□□□ -0.56
VARS-216ENST00000428445 ACOT7LQ6ZUV0 252 aa11.55□□□□□ -0.56
VARS-216ENST00000428445 PSENENQ9NZ42 101 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms