RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 C11orf68Q9H3H3 251 aaKnown RBP6.72□□□□□ -1.33
RFX3-AS1-202ENST00000427722 SEPSECSQ9HD40 501 aaKnown RBP6.72□□□□□ -1.33
RFX3-AS1-202ENST00000427722 SLC45A2Q9UMX9 530 aa6.72□□□□□ -1.33
RFX3-AS1-202ENST00000427722 HIGD1AQ9Y241 93 aa6.72□□□□□ -1.33
RFX3-AS1-202ENST00000427722 HLA-DRB4X5D2U9 266 aa6.72□□□□□ -1.33
RFX3-AS1-202ENST00000427722 RYR3Q15413 4870 aa6.72□□□□□ -1.33
RFX3-AS1-202ENST00000427722 STARD9Q9P2P6 4700 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 NUPR2A6NF83 97 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 H3BMM0 161 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 H3BRN7 92 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 HYPMO75409 117 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 CST7O76096 145 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 IGKV3-20P01619 116 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 ATF4P18848 351 aaPredicted RBP6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 S100A7P31151 101 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 IFITM3Q01628 133 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 TMEM41BQ5BJD5 291 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 GDF5OSQ5U4N7 250 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 FOXI2Q6ZQN5 318 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 ZNF546Q86UE3 836 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 C2orf50Q96LR7 162 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 UHRF2Q96PU4 802 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 SHANK2-AS3Q9BTD1 123 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 RSG1Q9BU20 258 aa6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 SLC25A39Q9BZJ4 359 aaPredicted RBP6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 GPN1Q9HCN4 374 aaPredicted RBP6.71□□□□□ -1.34
RFX3-AS1-202ENST00000427722 IGHV4-28A0A0C4DH34 117 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 FAM24AA6NFZ4 105 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 FNDC10F2Z333 226 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 F6UB75 175 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 ISLRO14498 428 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 GOSR2O14653 212 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 PVALBP20472 110 aaPredicted RBP6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 MEOX2P50222 304 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 FXYD7P58549 80 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 SELENOTP62341 195 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 FGL1Q08830 312 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 SAMD13Q5VXD3 122 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 TEPPQ6URK8 271 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 NRARPQ7Z6K4 114 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 Q8NAQ8 132 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 C16orf92Q96LL3 132 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 C20orf173Q96LM9 149 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 ARL6Q9H0F7 186 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 SAV1Q9H4B6 383 aaPredicted RBP6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 C11orf1Q9H5F2 150 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 NPVFQ9HCQ7 196 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 XCL2Q9UBD3 114 aa6.7□□□□□ -1.34
RFX3-AS1-202ENST00000427722 DYNC2H1Q8NCM8 4307 aaKnown RBP6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 UBE2L5PA0A1B0GUS4 154 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 IGSF23A1L1A6 192 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 AGPAT2O15120 278 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 DEDDO75618 318 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 RPL7P18124 248 aaKnown RBP6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 DEFA1P59665 94 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 DEFA3P59666 94 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 PLP1P60201 277 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 NUTF2P61970 127 aaKnown RBP6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 RAB32Q13637 225 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 IGFL4Q6B9Z1 124 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 EBLN2Q6P2I7 272 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 CEMP1Q6PRD7 247 aaPredicted RBP6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 OR4B1Q8NGF8 309 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 C17orf77Q96MU5 243 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 GPR82Q96P67 336 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 MGST2Q99735 147 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 GGACTQ9BVM4 153 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 C1QTNF4Q9BXJ3 329 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 MFFQ9GZY8 342 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 LYRM2Q9NU23 88 aaPredicted RBP6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 X6R8D5 127 aa6.69□□□□□ -1.34
RFX3-AS1-202ENST00000427722 ZNF705EA8MWA4 302 aaPredicted RBP6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 INMT-MINDY4F8WBC2 141 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 COX7A2P2O60397 106 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 PRAF2O60831 178 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 SIX6O95475 246 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 RBMY1A1P0DJD3 496 aaKnown RBP6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 RBMY1CP0DJD4 496 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 MIFP14174 115 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 RBMY1FQ15415 496 aaKnown RBP6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 LRRC37A5PQ49AS3 106 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 FAM78BQ5VT40 261 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 STX12Q86Y82 276 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 RNF182Q8N6D2 247 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 TMEM252Q8N6L7 170 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 CSNK1G2-AS1Q8NCQ2 148 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 PHLDA1Q8WV24 401 aaPredicted RBP6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 ARV1Q9H2C2 271 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 RPRMQ9NS64 109 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 UQCC1Q9NVA1 299 aa6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 KLK5Q9Y337 293 aaPredicted RBP6.68□□□□□ -1.34
RFX3-AS1-202ENST00000427722 IGHV3OR16-12A0A075B7B8 117 aa6.67□□□□□ -1.34
RFX3-AS1-202ENST00000427722 TRAV8-2A0A0B4J237 113 aa6.67□□□□□ -1.34
RFX3-AS1-202ENST00000427722 A0A0J9YX75 114 aa6.67□□□□□ -1.34
RFX3-AS1-202ENST00000427722 CAMLGP49069 296 aa6.67□□□□□ -1.34
RFX3-AS1-202ENST00000427722 SULT1A1P50225 295 aa6.67□□□□□ -1.34
RFX3-AS1-202ENST00000427722 HBG1P69891 147 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms