RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TPTE2P1Q5T6R2 138 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 STUMQ69YW2 141 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 ZNF826PQ6ZT77 177 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 FAM231DQ6ZW35 169 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 PDPNQ86YL7 162 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 TGIF2LXQ8IUE1 241 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 C11orf53Q8IXP5 236 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 CD177Q8N6Q3 437 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 TMEM105Q8N8V8 129 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 OR4P4Q8NGL7 312 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 OR10X1Q8NGY0 326 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 FAM222BQ8WU58 562 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 BORCS7Q96B45 105 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 NABP2Q9BQ15 211 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 HSPB9Q9BQS6 159 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 ZNF430Q9H8G1 570 aaPredicted RBP3.91□□□□□ -1.78
LINC00458-202ENST00000427299 ZNF331Q9NQX6 463 aaPredicted RBP3.91□□□□□ -1.78
LINC00458-202ENST00000427299 IDI2-AS1Q9NZ38 188 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 UQCR10Q9UDW1 63 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 NAT8BQ9UHF3 227 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 PYGO1Q9Y3Y4 419 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 YTHDF2Q9Y5A9 579 aaKnown RBP3.91□□□□□ -1.78
LINC00458-202ENST00000427299 LINC00312Q9Y6C7 94 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 V9GYV3 84 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 TRIOBPQ9H2D6 2365 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 WDFY3Q8IZQ1 3526 aa3.91□□□□□ -1.78
LINC00458-202ENST00000427299 SPEGQ15772 3267 aa3.9□□□□□ -1.78
LINC00458-202ENST00000427299 IGLV3-9A0A075B6K5 115 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 SMIM27A0A1W2PRY6 76 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 GRIFINA4D1Z8 144 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 IZUMO1RA6ND01 250 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 DEFB108AA8MXU0 73 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 K7EN84 100 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 CA2P00918 260 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 SNRPCP09234 159 aaKnown RBP3.9□□□□□ -1.79
LINC00458-202ENST00000427299 DEFA4P12838 97 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 NPPCP23582 126 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 PPOXP50336 477 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 HNRNPA3P51991 378 aaKnown RBP3.9□□□□□ -1.79
LINC00458-202ENST00000427299 UBE2G1P62253 170 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 MRPS11P82912 194 aaKnown RBP3.9□□□□□ -1.79
LINC00458-202ENST00000427299 MEF2CQ06413 473 aaPredicted RBP3.9□□□□□ -1.79
LINC00458-202ENST00000427299 CLEC12BQ2HXU8 276 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 ALKBH6Q3KRA9 238 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 RPL39P5Q59GN2 51 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 GCSAMLQ5JQS6 135 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 IGFL2Q6UWQ7 119 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF705AQ6ZN79 300 aaPredicted RBP3.9□□□□□ -1.79
LINC00458-202ENST00000427299 Q6ZR03 302 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 SLC25A48Q6ZT89 311 aaKnown RBP3.9□□□□□ -1.79
LINC00458-202ENST00000427299 ASCL5Q7RTU5 278 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 S100A7AQ86SG5 101 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 LRP11Q86VZ4 500 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 OR8I2Q8N0Y5 310 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 TPRX1Q8N7U7 411 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 C8orf31Q8N9H6 132 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF439Q8NDP4 499 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 RFESDQ8TAC1 157 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 IGF2BP2-AS1Q96M15 143 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 CDX2Q99626 313 aaPredicted RBP3.9□□□□□ -1.79
LINC00458-202ENST00000427299 OPRPNQ99935 248 aaPredicted RBP3.9□□□□□ -1.79
LINC00458-202ENST00000427299 SNHG12Q9BXW3 62 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 LINC00574Q9H8X3 128 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 TBL2Q9Y4P3 447 aaKnown RBP3.9□□□□□ -1.79
LINC00458-202ENST00000427299 SLC25A15Q9Y619 301 aa3.9□□□□□ -1.79
LINC00458-202ENST00000427299 A0A087WZ39 114 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 GGTLC3B5MD39 225 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 H0Y8G0 127 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 M0R1B8 84 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 UPK2O00526 184 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 PEX7O00628 323 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 DLEU1O43261 78 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 HSBP1O75506 76 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 APCSP02743 223 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 LINC00869P0C866 280 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 SAA1P0DJI8 122 aaPredicted RBP3.89□□□□□ -1.79
LINC00458-202ENST00000427299 CT45A6P0DMU7 189 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 CT45A5P0DMU8 189 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 CT45A7P0DMV0 189 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 MGST1P10620 155 aaKnown RBP3.89□□□□□ -1.79
LINC00458-202ENST00000427299 PMCHP20382 165 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 HNF1AP20823 631 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 FABP6P51161 128 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 KRTDAPP60985 99 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 RPL8P62917 257 aaKnown RBP3.89□□□□□ -1.79
LINC00458-202ENST00000427299 TNFAIP6P98066 277 aaPredicted RBP3.89□□□□□ -1.79
LINC00458-202ENST00000427299 VMA21Q3ZAQ7 101 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 SPATA45Q537H7 98 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 CT45A1Q5HYN5 189 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 ADAMTSL4-AS1Q5T5F5 129 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 C1orf185Q5T7R7 199 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 TEX36Q5VZQ5 186 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 C10orf113Q5VZT2 155 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 TMEM136Q6ZRR5 245 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF833PQ6ZTB9 187 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 MIR17HGQ75NE6 70 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 TCF23Q7RTU1 214 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 TMEM256Q8N2U0 113 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms