RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 CHAC2Q8WUX2 184 aa12.61□□□□□ -0.39
LMCD1-204ENST00000426878 RSG1Q9BU20 258 aa12.61□□□□□ -0.39
LMCD1-204ENST00000426878 SCRT1Q9BWW7 348 aa12.61□□□□□ -0.39
LMCD1-204ENST00000426878 H0YIZ8 118 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 H3BMM0 161 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 HLA-DRB4P13762 266 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 RPL7P18124 248 aaKnown RBP12.6□□□□□ -0.39
LMCD1-204ENST00000426878 ATF4P18848 351 aaPredicted RBP12.6□□□□□ -0.39
LMCD1-204ENST00000426878 CAMLGP49069 296 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 PPP1R1CQ8WVI7 109 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 UHRF2Q96PU4 802 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 SLC25A31Q9H0C2 315 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 ARV1Q9H2C2 271 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 OR5AC2Q9NZP5 309 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 HLA-DRB4X5D2U9 266 aa12.6□□□□□ -0.39
LMCD1-204ENST00000426878 STARD9Q9P2P6 4700 aa12.59□□□□□ -0.39
LMCD1-204ENST00000426878 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
LMCD1-204ENST00000426878 SPATA31B1PQ5VZV4 182 aa12.59□□□□□ -0.39
LMCD1-204ENST00000426878 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.59□□□□□ -0.39
LMCD1-204ENST00000426878 FOXI2Q6ZQN5 318 aa12.59□□□□□ -0.39
LMCD1-204ENST00000426878 CLUHP3Q96NS8 147 aa12.59□□□□□ -0.39
LMCD1-204ENST00000426878 RPL29P47914 159 aaKnown RBP12.58□□□□□ -0.4
LMCD1-204ENST00000426878 PRR20EP86478 221 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 PRR20CP86479 221 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 PRR20DP86480 221 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 PRR20BP86481 221 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 PRR20AP86496 221 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 LRRC37A5PQ49AS3 106 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 C16orf92Q96LL3 132 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 LINC00052Q96N35 136 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 RARRES2Q99969 163 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
LMCD1-204ENST00000426878 SAV1Q9H4B6 383 aaPredicted RBP12.58□□□□□ -0.4
LMCD1-204ENST00000426878 TENM2Q9NT68 2774 aa12.57□□□□□ -0.4
LMCD1-204ENST00000426878 A0A0J9YWU9 116 aa12.57□□□□□ -0.4
LMCD1-204ENST00000426878 NUTF2P61970 127 aaKnown RBP12.57□□□□□ -0.4
LMCD1-204ENST00000426878 EWSR1Q01844 656 aaKnown RBP eCLIP12.57□□□□□ -0.4
LMCD1-204ENST00000426878 NHLH2Q02577 135 aa12.57□□□□□ -0.4
LMCD1-204ENST00000426878 BAXQ07812 192 aa12.57□□□□□ -0.4
LMCD1-204ENST00000426878 Q6ZRG5 221 aa12.57□□□□□ -0.4
LMCD1-204ENST00000426878 OR11H2Q8NH07 326 aa12.57□□□□□ -0.4
LMCD1-204ENST00000426878 TMEM37Q8WXS4 190 aa12.57□□□□□ -0.4
LMCD1-204ENST00000426878 A0A087X0K7 114 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 UBE2L5PA0A1B0GUS4 154 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 MRPS12O15235 138 aaKnown RBP12.56□□□□□ -0.4
LMCD1-204ENST00000426878 COX7A2P2O60397 106 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 MPDU1O75352 247 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 MPC2O95563 127 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 PET100P0DJ07 73 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 C4BPBP20851 252 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 OPCMLQ14982 345 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 LINC00305Q7Z4B0 112 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 CSNK1G2-AS1Q8NCQ2 148 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 DNAJC4Q9NNZ3 241 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 RPRMQ9NS64 109 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 ALG5Q9Y673 324 aa12.56□□□□□ -0.4
LMCD1-204ENST00000426878 GDF5OSQ5U4N7 250 aa12.55□□□□□ -0.4
LMCD1-204ENST00000426878 C10orf113Q5VZT2 155 aa12.55□□□□□ -0.4
LMCD1-204ENST00000426878 MIC13Q5XKP0 118 aa12.55□□□□□ -0.4
LMCD1-204ENST00000426878 ZFAND6Q6FIF0 208 aa12.55□□□□□ -0.4
LMCD1-204ENST00000426878 OR5C1Q8NGR4 320 aa12.55□□□□□ -0.4
LMCD1-204ENST00000426878 C1QTNF4Q9BXJ3 329 aa12.55□□□□□ -0.4
LMCD1-204ENST00000426878 DYNC2H1Q8NCM8 4307 aaKnown RBP12.55□□□□□ -0.4
LMCD1-204ENST00000426878 FGF7P21781 194 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 C20orf173Q96LM9 149 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 C11orf68Q9H3H3 251 aaKnown RBP12.54□□□□□ -0.4
LMCD1-204ENST00000426878 SLC39A9Q9NUM3 307 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 TRAV8-2A0A0B4J237 113 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 A0A0J9YX75 114 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 ZNF705EA8MWA4 302 aaPredicted RBP12.54□□□□□ -0.4
LMCD1-204ENST00000426878 DEFB1P60022 68 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 B2MP61769 119 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 EBLN2Q6P2I7 272 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 PFDN5Q99471 154 aa12.54□□□□□ -0.4
LMCD1-204ENST00000426878 A8MTW9 85 aa12.53□□□□□ -0.4
LMCD1-204ENST00000426878 CXCL2P19875 107 aa12.53□□□□□ -0.4
LMCD1-204ENST00000426878 CXCL3P19876 107 aa12.53□□□□□ -0.4
LMCD1-204ENST00000426878 BPIFA4PQ86YQ2 179 aa12.53□□□□□ -0.4
LMCD1-204ENST00000426878 NPCDR1Q9BY65 106 aa12.53□□□□□ -0.4
LMCD1-204ENST00000426878 PXMP4Q9Y6I8 212 aa12.53□□□□□ -0.4
LMCD1-204ENST00000426878 LYSTQ99698 3801 aa12.52□□□□□ -0.41
LMCD1-204ENST00000426878 FGL1Q08830 312 aa12.52□□□□□ -0.41
LMCD1-204ENST00000426878 F6UB75 175 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 MIFP14174 115 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 CLINT1Q14677 625 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 FAM78BQ5VT40 261 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 MORN5Q5VZ52 161 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 LCN15Q6UWW0 184 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 ZNF709Q8N972 641 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 Q8NAQ8 132 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 XCL2Q9UBD3 114 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 HSPB11Q9Y547 144 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 X6R8D5 127 aa12.51□□□□□ -0.41
LMCD1-204ENST00000426878 IGLC2P0DOY2 106 aa12.5□□□□□ -0.41
LMCD1-204ENST00000426878 RPL12P30050 165 aaKnown RBP12.5□□□□□ -0.41
LMCD1-204ENST00000426878 PSG3Q16557 428 aa12.5□□□□□ -0.41
LMCD1-204ENST00000426878 OR4B1Q8NGF8 309 aa12.5□□□□□ -0.41
LMCD1-204ENST00000426878 THAP6Q8TBB0 222 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms