RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 C1orf194Q5T5A4 169 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 MIC13Q5XKP0 118 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 OR11H4Q8NGC9 324 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 OR1B1Q8NGR6 318 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 TMEM37Q8WXS4 190 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 NARS2Q96I59 477 aaKnown RBP5.53□□□□□ -1.52
LINC01049-201ENST00000426840 C8orf49Q96NF6 230 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 ATP5SQ99766 215 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 SPAG8Q99932 426 aaPredicted RBP5.53□□□□□ -1.52
LINC01049-201ENST00000426840 SMIM3Q9BZL3 60 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 TMEM231Q9H6L2 316 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 SMAD5-AS1Q9Y6J3 95 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 FBN3Q75N90 2809 aa5.53□□□□□ -1.52
LINC01049-201ENST00000426840 IGKV3-7A0A075B6H7 116 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 FXYD6-FXYD2A0A087WZ82 144 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 ZNF98A6NK75 572 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 H3BRN7 92 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 DEFB121Q5J5C9 76 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 PXDC1Q5TGL8 231 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 GBGT1Q8N5D6 347 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 MRAPQ8TCY5 172 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 GRAMD2BQ96HH9 432 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 C17orf77Q96MU5 243 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 SHANK2-AS3Q9BTD1 123 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 NPCDR1Q9BY65 106 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 PARD6GQ9BYG4 376 aaPredicted RBP5.52□□□□□ -1.53
LINC01049-201ENST00000426840 SLC25A39Q9BZJ4 359 aaPredicted RBP5.52□□□□□ -1.53
LINC01049-201ENST00000426840 ARL6Q9H0F7 186 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 ARV1Q9H2C2 271 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 MS4A6AQ9H2W1 248 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 DNAJC4Q9NNZ3 241 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 SLC39A9Q9NUM3 307 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 DOK5Q9P104 306 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 FBXL17Q9UF56 701 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 HIGD1AQ9Y241 93 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 RFNGQ9Y644 331 aa5.52□□□□□ -1.53
LINC01049-201ENST00000426840 TRAV2A0A0B4J234 112 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 HELTA6NFD8 242 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 OR4C46A6NHA9 309 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 HMSDA8MTL9 139 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 A8MZ25 164 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 K7EQG2 157 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 MRPS12O15235 138 aaKnown RBP5.51□□□□□ -1.53
LINC01049-201ENST00000426840 IFNA5P01569 189 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 OR5G3P0C626 314 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 NUP62P37198 522 aaPredicted RBP5.51□□□□□ -1.53
LINC01049-201ENST00000426840 TFPI2P48307 235 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 AP2S1P53680 142 aaPredicted RBP5.51□□□□□ -1.53
LINC01049-201ENST00000426840 CD81P60033 236 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 B2MP61769 119 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 PAFAH1B2P68402 229 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 ODF3L2Q3SX64 289 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 MORN5Q5VZ52 161 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 LEMD1Q68G75 181 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 LINC00322Q6ZN03 302 aaPredicted RBP5.51□□□□□ -1.53
LINC01049-201ENST00000426840 Q6ZRG5 221 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 OR8I2Q8N0Y5 310 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 FAM24BQ8N5W8 94 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 DEFB125Q8N687 156 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 INO80EQ8NBZ0 244 aaPredicted RBP5.51□□□□□ -1.53
LINC01049-201ENST00000426840 DCANP1Q8TF63 244 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 PPP1R14BQ96C90 147 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 UHRF2Q96PU4 802 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 RSG1Q9BU20 258 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 SCRT1Q9BWW7 348 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 SLC25A32Q9H2D1 315 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 PXMP4Q9Y6I8 212 aa5.51□□□□□ -1.53
LINC01049-201ENST00000426840 TRAV5A0A0B4J249 113 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 OR11H12B2RN74 326 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 DNASE2O00115 360 aaPredicted RBP5.5□□□□□ -1.53
LINC01049-201ENST00000426840 ARPC5O15511 151 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 COX7A2P2O60397 106 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 IGHV4-30-4P0DP06 118 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 CMC4P56277 68 aaPredicted RBP5.5□□□□□ -1.53
LINC01049-201ENST00000426840 CT83Q5H943 113 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 GCSAMLQ5JQS6 135 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 TOR2AQ5JU69 321 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 C10orf113Q5VZT2 155 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 SIGLEC15Q6ZMC9 328 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 LINC00305Q7Z4B0 112 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 GTSCR1Q86UQ5 136 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 TCTE3Q8IZS6 198 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 KCNRGQ8N5I3 272 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 ZNF709Q8N972 641 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 STXBP6Q8NFX7 210 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 OR1L4Q8NGR5 311 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 SCGB1C1Q8TD33 95 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 GATAD1Q8WUU5 269 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 FAM110AQ9BQ89 295 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 MFFQ9GZY8 342 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 WFDC10AQ9H1F0 79 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 SLC25A22Q9H936 323 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 CYTL1Q9NRR1 136 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 UBQLN2Q9UHD9 624 aa5.5□□□□□ -1.53
LINC01049-201ENST00000426840 DNAH9Q9NYC9 4486 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 C17orf112F2Z3M2 114 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 SOCS3O14543 225 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 CXCL2P19875 107 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms