RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 C2orf83Q53S99 150 aa10.71□□□□□ -0.69
USP42-203ENST00000426246 BCL6BQ8N143 479 aaPredicted RBP10.71□□□□□ -0.69
USP42-203ENST00000426246 BEND2Q8NDZ0 799 aa10.71□□□□□ -0.69
USP42-203ENST00000426246 ZNF596Q8TC21 504 aa10.71□□□□□ -0.69
USP42-203ENST00000426246 RAB37Q96AX2 223 aa10.71□□□□□ -0.69
USP42-203ENST00000426246 RBM14Q96PK6 669 aaKnown RBP10.71□□□□□ -0.69
USP42-203ENST00000426246 LRRK2Q5S007 2527 aa10.71□□□□□ -0.7
USP42-203ENST00000426246 C9JCJ5 164 aa10.71□□□□□ -0.7
USP42-203ENST00000426246 SMKR1H3BMG3 65 aa10.71□□□□□ -0.7
USP42-203ENST00000426246 DLEU1O43261 78 aa10.71□□□□□ -0.7
USP42-203ENST00000426246 LHBP01229 141 aa10.71□□□□□ -0.7
USP42-203ENST00000426246 OR5AL1P0C617 328 aa10.71□□□□□ -0.7
USP42-203ENST00000426246 EBLN2Q6P2I7 272 aa10.71□□□□□ -0.7
USP42-203ENST00000426246 OR4C5Q8NGB2 326 aa10.71□□□□□ -0.7
USP42-203ENST00000426246 TMUB1Q9BVT8 246 aa10.71□□□□□ -0.7
USP42-203ENST00000426246 TMEM178BH3BS89 294 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 MT-ND6P03923 174 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 ECSCRQ19T08 205 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 NUP37Q8NFH4 326 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 TIMM23O14925 209 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 CT45A10P0DMU9 189 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 RPL11P62913 178 aaKnown RBP10.7□□□□□ -0.7
USP42-203ENST00000426246 MPV17L2Q567V2 206 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 KLHDC1Q8N7A1 406 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 FAM167A-AS1Q96KT0 104 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 F11RQ9Y624 299 aaKnown RBP10.7□□□□□ -0.7
USP42-203ENST00000426246 FBLL1A6NHQ2 334 aaKnown RBP10.7□□□□□ -0.7
USP42-203ENST00000426246 A8MWL6 223 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 SPRY2O43597 315 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 NCR2O95944 276 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 TEX45Q8NA69 505 aa10.7□□□□□ -0.7
USP42-203ENST00000426246 IGLV2-8P01709 118 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 ORM1P02763 201 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 IGLL1P15814 213 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 RBPJQ06330 500 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 FA2HQ7L5A8 372 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 PPP1R27Q86WC6 154 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 GPR82Q96P67 336 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 BET1LQ9NYM9 111 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 A0A087X0K7 114 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 FAM181BA6NEQ2 426 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 CCL21O00585 134 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 OR2J3O76001 311 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 CD3EP07766 207 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 IGHV1-8P0DP01 117 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 CDSNQ15517 529 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 TMEM75Q8N9X5 138 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 OR2T8A6NH00 312 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 E7EQL1 145 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 HBBP68871 147 aa10.69□□□□□ -0.7
USP42-203ENST00000426246 BTF3P20290 206 aaKnown RBP10.68□□□□□ -0.7
USP42-203ENST00000426246 LOXP28300 417 aaPredicted RBP10.68□□□□□ -0.7
USP42-203ENST00000426246 CFHR2P36980 270 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 OR4F17Q8NGA8 305 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 FXYD5Q96DB9 178 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 VWC2LB2RUY7 222 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 APOHP02749 345 aaPredicted RBP10.68□□□□□ -0.7
USP42-203ENST00000426246 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 CGB3P0DN86 165 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 CGB7P0DN87 165 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 PRRX1P54821 245 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 TMEM133Q9H2Q1 129 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 RPP21Q9H633 154 aaKnown RBP10.68□□□□□ -0.7
USP42-203ENST00000426246 IGSF10Q6WRI0 2623 aa10.68□□□□□ -0.7
USP42-203ENST00000426246 IGKV2-40A0A087WW87 121 aaPredicted RBP10.67□□□□□ -0.7
USP42-203ENST00000426246 IGKV2D-40P01614 121 aaPredicted RBP10.67□□□□□ -0.7
USP42-203ENST00000426246 LBHQ53QV2 105 aaPredicted RBP10.67□□□□□ -0.7
USP42-203ENST00000426246 TMEM186Q96B77 213 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 GRAMD2BQ96HH9 432 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 RAI1Q7Z5J4 1906 aaPredicted RBP10.67□□□□□ -0.7
USP42-203ENST00000426246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.67□□□□□ -0.7
USP42-203ENST00000426246 IGHV2-26A0A0B4J1V2 119 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 KIR2DL5BA0A0G2JN68 375 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 KIR2DL5BA0A0G2JPC4 375 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 NPIPB5A8MRT5 1133 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 NDUFS7O75251 213 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 FCN3O75636 299 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 IGLC3P0DOY3 106 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 HLA-DMBP28068 263 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 GATA4P43694 442 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 KIR2DL5AQ8N109 375 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.67□□□□□ -0.7
USP42-203ENST00000426246 TMEM70Q9BUB7 260 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 NGBQ9NPG2 151 aa10.67□□□□□ -0.7
USP42-203ENST00000426246 NMUP48645 174 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 ADORA2A-AS1P86434 159 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 FBXL19-AS1Q494R0 122 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 HIF1ANQ9NWT6 349 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 TEX43Q6ZNM6 134 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 C5orf17Q8NAS9 161 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 C11orf52Q96A22 123 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 C8orf49Q96NF6 230 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 VPS25Q9BRG1 176 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 TCRAP04437 139 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 FCER1GP30273 86 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 SELENOTP62341 195 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 LY6DQ14210 128 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 OR5AN1Q8NGI8 311 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 CACNG8Q8WXS5 425 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms