RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 S100A7AQ86SG5 101 aa16.35■□□□□ 0.21
PTCHD3P2-201ENST00000424937 GATAD1Q8WUU5 269 aa16.35■□□□□ 0.21
PTCHD3P2-201ENST00000424937 PPP1R1CQ8WVI7 109 aa16.35■□□□□ 0.21
PTCHD3P2-201ENST00000424937 ALG5Q9Y673 324 aa16.35■□□□□ 0.21
PTCHD3P2-201ENST00000424937 A0A0J9YWU9 116 aa16.34■□□□□ 0.21
PTCHD3P2-201ENST00000424937 ISLRO14498 428 aa16.34■□□□□ 0.21
PTCHD3P2-201ENST00000424937 COX7A2P2O60397 106 aa16.34■□□□□ 0.21
PTCHD3P2-201ENST00000424937 ATF4P18848 351 aaPredicted RBP16.34■□□□□ 0.21
PTCHD3P2-201ENST00000424937 DEFB1P60022 68 aa16.34■□□□□ 0.21
PTCHD3P2-201ENST00000424937 MORN3Q6PF18 240 aaPredicted RBP16.34■□□□□ 0.21
PTCHD3P2-201ENST00000424937 PATE2Q6UY27 113 aa16.34■□□□□ 0.21
PTCHD3P2-201ENST00000424937 C16orf92Q96LL3 132 aa16.34■□□□□ 0.21
PTCHD3P2-201ENST00000424937 SLC25A31Q9H0C2 315 aa16.34■□□□□ 0.21
PTCHD3P2-201ENST00000424937 RPL7P18124 248 aaKnown RBP16.33■□□□□ 0.2
PTCHD3P2-201ENST00000424937 EWSR1Q01844 656 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTCHD3P2-201ENST00000424937 ATP6V1FQ16864 119 aa16.33■□□□□ 0.2
PTCHD3P2-201ENST00000424937 MIC13Q5XKP0 118 aa16.33■□□□□ 0.2
PTCHD3P2-201ENST00000424937 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.33■□□□□ 0.2
PTCHD3P2-201ENST00000424937 H3BMM0 161 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 PET100P0DJ07 73 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 HLA-DRB4P13762 266 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 FGF7P21781 194 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 NHLH2Q02577 135 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 FGL1Q08830 312 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 GDF5OSQ5U4N7 250 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 LINC00305Q7Z4B0 112 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 C17orf77Q96MU5 243 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 RARRES2Q99969 163 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 HLA-DRB4X5D2U9 266 aa16.32■□□□□ 0.2
PTCHD3P2-201ENST00000424937 GIG44P09565 113 aaPredicted RBP16.31■□□□□ 0.2
PTCHD3P2-201ENST00000424937 TMEM41BQ5BJD5 291 aa16.31■□□□□ 0.2
PTCHD3P2-201ENST00000424937 FOXI2Q6ZQN5 318 aa16.31■□□□□ 0.2
PTCHD3P2-201ENST00000424937 OR5C1Q8NGR4 320 aa16.31■□□□□ 0.2
PTCHD3P2-201ENST00000424937 OR11H2Q8NH07 326 aa16.31■□□□□ 0.2
PTCHD3P2-201ENST00000424937 IL17DQ8TAD2 202 aa16.31■□□□□ 0.2
PTCHD3P2-201ENST00000424937 SAV1Q9H4B6 383 aaPredicted RBP16.31■□□□□ 0.2
PTCHD3P2-201ENST00000424937 MPC2O95563 127 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 PRR20EP86478 221 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 PRR20CP86479 221 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 PRR20DP86480 221 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 PRR20BP86481 221 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 PRR20AP86496 221 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 CLINT1Q14677 625 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 C10orf113Q5VZT2 155 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 Q6ZRG5 221 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 C20orf173Q96LM9 149 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 RNF24Q9Y225 148 aa16.3■□□□□ 0.2
PTCHD3P2-201ENST00000424937 ELOA3CA0A087WX78 387 aaPredicted RBP16.29■□□□□ 0.2
PTCHD3P2-201ENST00000424937 IGKV3-20P01619 116 aa16.29■□□□□ 0.2
PTCHD3P2-201ENST00000424937 B2MP61769 119 aa16.29■□□□□ 0.2
PTCHD3P2-201ENST00000424937 OPCMLQ14982 345 aa16.29■□□□□ 0.2
PTCHD3P2-201ENST00000424937 TMEM37Q8WXS4 190 aa16.29■□□□□ 0.2
PTCHD3P2-201ENST00000424937 RPRMQ9NS64 109 aa16.29■□□□□ 0.2
PTCHD3P2-201ENST00000424937 CLEC5AQ9NY25 188 aa16.29■□□□□ 0.2
PTCHD3P2-201ENST00000424937 STARD9Q9P2P6 4700 aa16.29■□□□□ 0.2
PTCHD3P2-201ENST00000424937 CSMD3Q7Z407 3707 aa16.29■□□□□ 0.2
PTCHD3P2-201ENST00000424937 KMT2CQ8NEZ4 4911 aaKnown RBP16.28■□□□□ 0.2
PTCHD3P2-201ENST00000424937 F6UB75 175 aa16.28■□□□□ 0.2
PTCHD3P2-201ENST00000424937 RPL29P47914 159 aaKnown RBP16.28■□□□□ 0.2
PTCHD3P2-201ENST00000424937 NUTF2P61970 127 aaKnown RBP16.28■□□□□ 0.2
PTCHD3P2-201ENST00000424937 EBLN2Q6P2I7 272 aa16.28■□□□□ 0.2
PTCHD3P2-201ENST00000424937 THAP6Q8TBB0 222 aa16.28■□□□□ 0.2
PTCHD3P2-201ENST00000424937 RNF126Q9BV68 326 aa16.28■□□□□ 0.2
PTCHD3P2-201ENST00000424937 SLC39A9Q9NUM3 307 aa16.28■□□□□ 0.2
PTCHD3P2-201ENST00000424937 MBD2Q9UBB5 411 aa16.28■□□□□ 0.2
PTCHD3P2-201ENST00000424937 A0A087X0K7 114 aa16.27■□□□□ 0.2
PTCHD3P2-201ENST00000424937 MPDU1O75352 247 aa16.27■□□□□ 0.2
PTCHD3P2-201ENST00000424937 MORN5Q5VZ52 161 aa16.27■□□□□ 0.2
PTCHD3P2-201ENST00000424937 IGFL4Q6B9Z1 124 aa16.27■□□□□ 0.2
PTCHD3P2-201ENST00000424937 RNF182Q8N6D2 247 aa16.27■□□□□ 0.2
PTCHD3P2-201ENST00000424937 OR1L4Q8NGR5 311 aa16.27■□□□□ 0.2
PTCHD3P2-201ENST00000424937 NPCDR1Q9BY65 106 aa16.27■□□□□ 0.2
PTCHD3P2-201ENST00000424937 DNAJC4Q9NNZ3 241 aa16.27■□□□□ 0.2
PTCHD3P2-201ENST00000424937 PXMP4Q9Y6I8 212 aa16.27■□□□□ 0.2
PTCHD3P2-201ENST00000424937 TRAV8-2A0A0B4J237 113 aa16.26■□□□□ 0.19
PTCHD3P2-201ENST00000424937 MRPS12O15235 138 aaKnown RBP16.26■□□□□ 0.19
PTCHD3P2-201ENST00000424937 CXCL3P19876 107 aa16.26■□□□□ 0.19
PTCHD3P2-201ENST00000424937 SPATA31B1PQ5VZV4 182 aa16.26■□□□□ 0.19
PTCHD3P2-201ENST00000424937 OR4B1Q8NGF8 309 aa16.26■□□□□ 0.19
PTCHD3P2-201ENST00000424937 PFDN5Q99471 154 aa16.26■□□□□ 0.19
PTCHD3P2-201ENST00000424937 MED28Q9H204 178 aa16.26■□□□□ 0.19
PTCHD3P2-201ENST00000424937 XCL2Q9UBD3 114 aa16.26■□□□□ 0.19
PTCHD3P2-201ENST00000424937 A0A0J9YX75 114 aa16.25■□□□□ 0.19
PTCHD3P2-201ENST00000424937 BPIFA4PQ86YQ2 179 aa16.25■□□□□ 0.19
PTCHD3P2-201ENST00000424937 ZNF738Q8NE65 137 aa16.25■□□□□ 0.19
PTCHD3P2-201ENST00000424937 LRRC20Q8TCA0 184 aa16.25■□□□□ 0.19
PTCHD3P2-201ENST00000424937 CHAC2Q8WUX2 184 aa16.25■□□□□ 0.19
PTCHD3P2-201ENST00000424937 C1QTNF4Q9BXJ3 329 aa16.25■□□□□ 0.19
PTCHD3P2-201ENST00000424937 HSPB11Q9Y547 144 aa16.25■□□□□ 0.19
PTCHD3P2-201ENST00000424937 SNRPCP09234 159 aaKnown RBP16.24■□□□□ 0.19
PTCHD3P2-201ENST00000424937 FXYD7P58549 80 aa16.24■□□□□ 0.19
PTCHD3P2-201ENST00000424937 PMS2P11Q13670 270 aa16.24■□□□□ 0.19
PTCHD3P2-201ENST00000424937 FCN2Q15485 313 aa16.24■□□□□ 0.19
PTCHD3P2-201ENST00000424937 FAM78BQ5VT40 261 aa16.24■□□□□ 0.19
PTCHD3P2-201ENST00000424937 C11orf68Q9H3H3 251 aaKnown RBP16.24■□□□□ 0.19
PTCHD3P2-201ENST00000424937 DEFB4AO15263 64 aa16.23■□□□□ 0.19
PTCHD3P2-201ENST00000424937 RPL12P30050 165 aaKnown RBP16.23■□□□□ 0.19
PTCHD3P2-201ENST00000424937 RGS21Q2M5E4 152 aa16.23■□□□□ 0.19
PTCHD3P2-201ENST00000424937 CSNK1G2-AS1Q8NCQ2 148 aa16.23■□□□□ 0.19
PTCHD3P2-201ENST00000424937 OR11H7Q8NGC8 314 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms