RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SLC25A22Q9H936 323 aa12.76□□□□□ -0.37
COL7A1-202ENST00000422991 GP9P14770 177 aa12.75□□□□□ -0.37
COL7A1-202ENST00000422991 GUCA2BQ16661 112 aa12.75□□□□□ -0.37
COL7A1-202ENST00000422991 OR8I2Q8N0Y5 310 aa12.75□□□□□ -0.37
COL7A1-202ENST00000422991 ZNF471Q9BX82 626 aaPredicted RBP12.75□□□□□ -0.37
COL7A1-202ENST00000422991 RPL11P62913 178 aaKnown RBP12.74□□□□□ -0.37
COL7A1-202ENST00000422991 GPR82Q96P67 336 aa12.74□□□□□ -0.37
COL7A1-202ENST00000422991 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
COL7A1-202ENST00000422991 IGKV3-7A0A075B6H7 116 aa12.73□□□□□ -0.37
COL7A1-202ENST00000422991 NKX2-5P52952 324 aaPredicted RBP12.73□□□□□ -0.37
COL7A1-202ENST00000422991 RAB2AP61019 212 aa12.73□□□□□ -0.37
COL7A1-202ENST00000422991 SERF2P84101 59 aa12.73□□□□□ -0.37
COL7A1-202ENST00000422991 ACOT6Q3I5F7 207 aaPredicted RBP12.73□□□□□ -0.37
COL7A1-202ENST00000422991 SPATA31B1PQ5VZV4 182 aa12.73□□□□□ -0.37
COL7A1-202ENST00000422991 STXBP6Q8NFX7 210 aa12.73□□□□□ -0.37
COL7A1-202ENST00000422991 PRR25Q96S07 402 aa12.73□□□□□ -0.37
COL7A1-202ENST00000422991 MRPL32Q9BYC8 188 aaKnown RBP12.73□□□□□ -0.37
COL7A1-202ENST00000422991 MS4A6AQ9H2W1 248 aa12.73□□□□□ -0.37
COL7A1-202ENST00000422991 SEPSECSQ9HD40 501 aaKnown RBP12.73□□□□□ -0.37
COL7A1-202ENST00000422991 TRAV2A0A0B4J234 112 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 SPP1P10451 314 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 RPL7P18124 248 aaKnown RBP12.72□□□□□ -0.37
COL7A1-202ENST00000422991 M6PRP20645 277 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 GALR1P47211 349 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 FAM78BQ5VT40 261 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 STOML3Q8TAV4 291 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 NRN1Q9NPD7 142 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 FUT9Q9Y231 359 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 SMAD5-AS1Q9Y6J3 95 aa12.72□□□□□ -0.37
COL7A1-202ENST00000422991 TRAV5A0A0B4J249 113 aa12.71□□□□□ -0.37
COL7A1-202ENST00000422991 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.37
COL7A1-202ENST00000422991 TFPI2P48307 235 aa12.71□□□□□ -0.37
COL7A1-202ENST00000422991 RHOBP62745 196 aa12.71□□□□□ -0.37
COL7A1-202ENST00000422991 EIF5AP63241 154 aaKnown RBP12.71□□□□□ -0.37
COL7A1-202ENST00000422991 PAFAH1B2P68402 229 aa12.71□□□□□ -0.37
COL7A1-202ENST00000422991 MIR17HGQ75NE6 70 aa12.71□□□□□ -0.37
COL7A1-202ENST00000422991 DCANP1Q8TF63 244 aa12.71□□□□□ -0.37
COL7A1-202ENST00000422991 C17orf77Q96MU5 243 aa12.71□□□□□ -0.37
COL7A1-202ENST00000422991 AURKAIP1Q9NWT8 199 aaPredicted RBP12.71□□□□□ -0.37
COL7A1-202ENST00000422991 PRKDCP78527 4128 aaKnown RBP12.7□□□□□ -0.38
COL7A1-202ENST00000422991 K7EQG2 157 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
COL7A1-202ENST00000422991 MBP02144 154 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 PRB2P02812 416 aaPredicted RBP12.7□□□□□ -0.38
COL7A1-202ENST00000422991 TPT1P13693 172 aaKnown RBP12.7□□□□□ -0.38
COL7A1-202ENST00000422991 GTSCR1Q86UQ5 136 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 BPIFA4PQ86YQ2 179 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 BAP18Q8IXM2 172 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 OR10G4Q8NGN3 311 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 OR10G9Q8NGN4 311 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 OR10G7Q8NGN6 311 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 FAM167A-AS1Q96KT0 104 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 SLC25A2Q9BXI2 301 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 TGP01266 2768 aa12.7□□□□□ -0.38
COL7A1-202ENST00000422991 A0A087X0K7 114 aa12.69□□□□□ -0.38
COL7A1-202ENST00000422991 CD7P09564 240 aa12.69□□□□□ -0.38
COL7A1-202ENST00000422991 ATF4P18848 351 aaPredicted RBP12.69□□□□□ -0.38
COL7A1-202ENST00000422991 C4BPBP20851 252 aa12.69□□□□□ -0.38
COL7A1-202ENST00000422991 CD81P60033 236 aa12.69□□□□□ -0.38
COL7A1-202ENST00000422991 TMEM41BQ5BJD5 291 aa12.69□□□□□ -0.38
COL7A1-202ENST00000422991 FAM122CQ6P4D5 195 aa12.69□□□□□ -0.38
COL7A1-202ENST00000422991 SLC51BQ86UW2 128 aa12.69□□□□□ -0.38
COL7A1-202ENST00000422991 WFDC3Q8IUB2 231 aa12.69□□□□□ -0.38
COL7A1-202ENST00000422991 BOLA2-SMG1P6H3BVE0 249 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 SOCS3O14543 225 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 SEC11BP0C7V7 166 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 MEOX2P50222 304 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 ODF3L2Q3SX64 289 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 Q8N1Y9 231 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 RPP25LQ8N5L8 163 aaKnown RBP12.68□□□□□ -0.38
COL7A1-202ENST00000422991 FAM24BQ8N5W8 94 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 RPRMQ9NS64 109 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 TMEM14CQ9P0S9 112 aa12.68□□□□□ -0.38
COL7A1-202ENST00000422991 IGLC2P0DOY2 106 aa12.67□□□□□ -0.38
COL7A1-202ENST00000422991 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
COL7A1-202ENST00000422991 AKR1C8PQ5T2L2 129 aa12.67□□□□□ -0.38
COL7A1-202ENST00000422991 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
COL7A1-202ENST00000422991 A0A1W2PPV4 95 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 K7EIL1 84 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 PYYP10082 97 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 TAS2R45P59539 299 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 KHDC3LQ587J8 217 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 TMED6Q8WW62 240 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 FAM110AQ9BQ89 295 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 MAP6D1Q9H9H5 199 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 PLA2G2EQ9NZK7 142 aa12.66□□□□□ -0.38
COL7A1-202ENST00000422991 H3BQ15 152 aa12.65□□□□□ -0.38
COL7A1-202ENST00000422991 EIF3GO75821 320 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL7A1-202ENST00000422991 PSMB3P49720 205 aa12.65□□□□□ -0.38
COL7A1-202ENST00000422991 LCN15Q6UWW0 184 aa12.65□□□□□ -0.38
COL7A1-202ENST00000422991 SSX7Q7RTT5 188 aa12.65□□□□□ -0.38
COL7A1-202ENST00000422991 ZNF503Q96F45 646 aa12.65□□□□□ -0.38
COL7A1-202ENST00000422991 WFDC10AQ9H1F0 79 aa12.65□□□□□ -0.38
COL7A1-202ENST00000422991 HRH4Q9H3N8 390 aa12.65□□□□□ -0.38
COL7A1-202ENST00000422991 UBQLN2Q9UHD9 624 aa12.65□□□□□ -0.38
COL7A1-202ENST00000422991 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms