RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 SYNGR2O43760 224 aa13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 FAUP35544 74 aaKnown RBP13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 TMBIM6P55061 237 aa13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 SPINK13Q1W4C9 94 aa13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 TMEM182Q6ZP80 229 aaPredicted RBP13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 TMED4Q7Z7H5 227 aa13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 BPIFCQ8NFQ6 507 aa13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 TMEM208Q9BTX3 173 aa13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 TMED3Q9Y3Q3 217 aa13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 LRP1BQ9NZR2 4599 aa13.11□□□□□ -0.31
AC004540.1-203ENST00000421862 M0R2Z0 102 aa13.1□□□□□ -0.31
AC004540.1-203ENST00000421862 DUSP14O95147 198 aaKnown RBP13.1□□□□□ -0.31
AC004540.1-203ENST00000421862 GATA2P23769 480 aaPredicted RBP13.1□□□□□ -0.31
AC004540.1-203ENST00000421862 TNFSF8P32971 234 aa13.1□□□□□ -0.31
AC004540.1-203ENST00000421862 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
AC004540.1-203ENST00000421862 KRTAP4-5Q9BYR2 181 aa13.1□□□□□ -0.31
AC004540.1-203ENST00000421862 PAIP2BQ9ULR5 123 aaKnown RBP13.1□□□□□ -0.31
AC004540.1-203ENST00000421862 FABP12A6NFH5 140 aa13.09□□□□□ -0.31
AC004540.1-203ENST00000421862 VAMP1P23763 118 aa13.09□□□□□ -0.31
AC004540.1-203ENST00000421862 B2MP61769 119 aa13.09□□□□□ -0.31
AC004540.1-203ENST00000421862 ACOT7LQ6ZUV0 252 aa13.09□□□□□ -0.31
AC004540.1-203ENST00000421862 BAP18Q8IXM2 172 aa13.09□□□□□ -0.31
AC004540.1-203ENST00000421862 TMEM147Q9BVK8 224 aa13.09□□□□□ -0.31
AC004540.1-203ENST00000421862 ZNF705GA8MUZ8 300 aaPredicted RBP13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 SFT2D2O95562 160 aa13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 PRM2P04554 102 aa13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 ORM2P19652 201 aa13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 S100A7P31151 101 aa13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 PPP1R1AQ13522 171 aa13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 TMEM144Q7Z5S9 345 aa13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 RNF182Q8N6D2 247 aa13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 ZNRF2Q8NHG8 242 aa13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 DEDD2Q8WXF8 326 aa13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 SLC25A21Q9BQT8 299 aaPredicted RBP13.08□□□□□ -0.32
AC004540.1-203ENST00000421862 H3BMQ9 156 aa13.07□□□□□ -0.32
AC004540.1-203ENST00000421862 BOLA2-SMG1P6H3BVE0 249 aa13.07□□□□□ -0.32
AC004540.1-203ENST00000421862 WRBO00258 174 aa13.07□□□□□ -0.32
AC004540.1-203ENST00000421862 AP3S2P59780 193 aa13.07□□□□□ -0.32
AC004540.1-203ENST00000421862 PLP1P60201 277 aa13.07□□□□□ -0.32
AC004540.1-203ENST00000421862 AKR1C1Q04828 323 aa13.07□□□□□ -0.32
AC004540.1-203ENST00000421862 SHANK2-AS3Q9BTD1 123 aa13.07□□□□□ -0.32
AC004540.1-203ENST00000421862 SLC25A39Q9BZJ4 359 aaPredicted RBP13.07□□□□□ -0.32
AC004540.1-203ENST00000421862 V9GYH0 126 aa13.07□□□□□ -0.32
AC004540.1-203ENST00000421862 A0A087X0K7 114 aa13.06□□□□□ -0.32
AC004540.1-203ENST00000421862 NBDYA0A0U1RRE5 68 aa13.06□□□□□ -0.32
AC004540.1-203ENST00000421862 H3BP45 60 aa13.06□□□□□ -0.32
AC004540.1-203ENST00000421862 SPANXN5Q5MJ07 72 aa13.06□□□□□ -0.32
AC004540.1-203ENST00000421862 IGFL4Q6B9Z1 124 aa13.06□□□□□ -0.32
AC004540.1-203ENST00000421862 TOMM5Q8N4H5 51 aa13.06□□□□□ -0.32
AC004540.1-203ENST00000421862 RPL7P18124 248 aaKnown RBP13.05□□□□□ -0.32
AC004540.1-203ENST00000421862 TNP2Q05952 138 aa13.05□□□□□ -0.32
AC004540.1-203ENST00000421862 CYP2G1PQ6ZSU1 146 aa13.05□□□□□ -0.32
AC004540.1-203ENST00000421862 TMEM256Q8N2U0 113 aa13.05□□□□□ -0.32
AC004540.1-203ENST00000421862 MCFD2Q8NI22 146 aa13.05□□□□□ -0.32
AC004540.1-203ENST00000421862 ATG101Q9BSB4 218 aa13.05□□□□□ -0.32
AC004540.1-203ENST00000421862 STRAPQ9Y3F4 350 aaKnown RBP13.05□□□□□ -0.32
AC004540.1-203ENST00000421862 TRAV12-2A0A075B6T6 113 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 PMS2P5A8MQ11 134 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 CDK2AP2O75956 126 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 DEFB130BP0DP73 79 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 DEFB130AP0DP74 79 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 CXCL3P19876 107 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 AZU1P20160 251 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 ZNF738Q8NE65 137 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 HIGD1AQ9Y241 93 aa13.04□□□□□ -0.32
AC004540.1-203ENST00000421862 APOBP04114 4563 aaKnown RBP13.03□□□□□ -0.32
AC004540.1-203ENST00000421862 ATP5G1P05496 136 aa13.03□□□□□ -0.32
AC004540.1-203ENST00000421862 HOXB5P09067 269 aa13.03□□□□□ -0.32
AC004540.1-203ENST00000421862 ATP5G3P48201 142 aa13.03□□□□□ -0.32
AC004540.1-203ENST00000421862 UBE2MP61081 183 aaKnown RBP13.03□□□□□ -0.32
AC004540.1-203ENST00000421862 RAP2BP61225 183 aa13.03□□□□□ -0.32
AC004540.1-203ENST00000421862 ID3Q02535 119 aa13.03□□□□□ -0.32
AC004540.1-203ENST00000421862 C6orf223Q8N319 242 aa13.03□□□□□ -0.32
AC004540.1-203ENST00000421862 F5H768 121 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 K7EPK0 472 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 MRPS12O15235 138 aaKnown RBP13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 IL5P05113 134 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 LINC00869P0C866 280 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 TAS2R60P59551 318 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 SELENOTP62341 195 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 HIST1H1AQ02539 215 aaPredicted RBP13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 FGL1Q08830 312 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 RNASE8Q8TDE3 154 aaKnown RBP13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 C16orf74Q96GX8 76 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 UHRF2Q96PU4 802 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 LINC00588Q9Y4M8 146 aa13.02□□□□□ -0.33
AC004540.1-203ENST00000421862 CBY3A6NI87 242 aa13.01□□□□□ -0.33
AC004540.1-203ENST00000421862 HYPMO75409 117 aa13.01□□□□□ -0.33
AC004540.1-203ENST00000421862 FCN2Q15485 313 aa13.01□□□□□ -0.33
AC004540.1-203ENST00000421862 PYDC2Q56P42 97 aa13.01□□□□□ -0.33
AC004540.1-203ENST00000421862 RNF141Q8WVD5 230 aa13.01□□□□□ -0.33
AC004540.1-203ENST00000421862 C16orf90A8MZG2 172 aa13□□□□□ -0.33
AC004540.1-203ENST00000421862 FNDC10F2Z333 226 aa13□□□□□ -0.33
AC004540.1-203ENST00000421862 NOL3O60936 208 aaKnown RBP13□□□□□ -0.33
AC004540.1-203ENST00000421862 ADAP1O75689 374 aa13□□□□□ -0.33
AC004540.1-203ENST00000421862 NUDT3O95989 172 aa13□□□□□ -0.33
AC004540.1-203ENST00000421862 CXCL2P19875 107 aa13□□□□□ -0.33
AC004540.1-203ENST00000421862 POLR2GP62487 172 aaKnown RBP eCLIP13□□□□□ -0.33
AC004540.1-203ENST00000421862 DLK1P80370 383 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms