RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 STXBP6Q8NFX7 210 aa20.29■□□□□ 0.84
FAAP20-207ENST00000420515 KCNIP2Q9NS61 270 aa20.29■□□□□ 0.84
FAAP20-207ENST00000420515 TIMM9Q9Y5J7 89 aa20.29■□□□□ 0.84
FAAP20-207ENST00000420515 BORCS7-ASMTA0A0B4J1R7 106 aa20.28■□□□□ 0.84
FAAP20-207ENST00000420515 DEFA6Q01524 100 aa20.28■□□□□ 0.84
FAAP20-207ENST00000420515 PFDN5Q99471 154 aa20.28■□□□□ 0.84
FAAP20-207ENST00000420515 WFDC10AQ9H1F0 79 aa20.28■□□□□ 0.84
FAAP20-207ENST00000420515 SEPSECSQ9HD40 501 aaKnown RBP20.28■□□□□ 0.84
FAAP20-207ENST00000420515 PFDN2Q9UHV9 154 aa20.28■□□□□ 0.84
FAAP20-207ENST00000420515 K7EIL1 84 aa20.27■□□□□ 0.84
FAAP20-207ENST00000420515 NKX2-5P52952 324 aaPredicted RBP20.27■□□□□ 0.84
FAAP20-207ENST00000420515 Q8N1Y9 231 aa20.27■□□□□ 0.84
FAAP20-207ENST00000420515 HELTA6NFD8 242 aa20.27■□□□□ 0.83
FAAP20-207ENST00000420515 EIF3GO75821 320 aaKnown RBP eCLIP20.27■□□□□ 0.83
FAAP20-207ENST00000420515 DCANP1Q8TF63 244 aa20.27■□□□□ 0.83
FAAP20-207ENST00000420515 GATAD1Q8WUU5 269 aa20.27■□□□□ 0.83
FAAP20-207ENST00000420515 ZMAT5Q9UDW3 170 aaKnown RBP20.27■□□□□ 0.83
FAAP20-207ENST00000420515 KANTRA0A1W2PQU2 76 aa20.26■□□□□ 0.83
FAAP20-207ENST00000420515 MRPS12O15235 138 aaKnown RBP20.26■□□□□ 0.83
FAAP20-207ENST00000420515 JTBO76095 146 aa20.26■□□□□ 0.83
FAAP20-207ENST00000420515 CD5P06127 495 aa20.26■□□□□ 0.83
FAAP20-207ENST00000420515 CD81P60033 236 aa20.26■□□□□ 0.83
FAAP20-207ENST00000420515 FAM78BQ5VT40 261 aa20.26■□□□□ 0.83
FAAP20-207ENST00000420515 C9orf62Q8N4C0 152 aa20.26■□□□□ 0.83
FAAP20-207ENST00000420515 PSMG3Q9BT73 122 aaPredicted RBP20.26■□□□□ 0.83
FAAP20-207ENST00000420515 UBQLN2Q9UHD9 624 aa20.26■□□□□ 0.83
FAAP20-207ENST00000420515 SNRPCP09234 159 aaKnown RBP20.25■□□□□ 0.83
FAAP20-207ENST00000420515 RAB2AP61019 212 aa20.25■□□□□ 0.83
FAAP20-207ENST00000420515 MIR17HGQ75NE6 70 aa20.25■□□□□ 0.83
FAAP20-207ENST00000420515 C19orf73Q9NVV2 129 aa20.25■□□□□ 0.83
FAAP20-207ENST00000420515 DNASE2O00115 360 aaPredicted RBP20.24■□□□□ 0.83
FAAP20-207ENST00000420515 PFDN1O60925 122 aa20.24■□□□□ 0.83
FAAP20-207ENST00000420515 ZNF471Q9BX82 626 aaPredicted RBP20.24■□□□□ 0.83
FAAP20-207ENST00000420515 K7EQG2 157 aa20.23■□□□□ 0.83
FAAP20-207ENST00000420515 ODF3L2Q3SX64 289 aa20.23■□□□□ 0.83
FAAP20-207ENST00000420515 OR2G3Q8NGZ4 309 aa20.23■□□□□ 0.83
FAAP20-207ENST00000420515 NRN1Q9NPD7 142 aa20.23■□□□□ 0.83
FAAP20-207ENST00000420515 OR4C46A6NHA9 309 aa20.22■□□□□ 0.83
FAAP20-207ENST00000420515 GTSCR1Q86UQ5 136 aa20.22■□□□□ 0.83
FAAP20-207ENST00000420515 SLC25A2Q9BXI2 301 aa20.22■□□□□ 0.83
FAAP20-207ENST00000420515 S100A7P31151 101 aa20.22■□□□□ 0.83
FAAP20-207ENST00000420515 PAFAH1B2P68402 229 aa20.22■□□□□ 0.83
FAAP20-207ENST00000420515 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.22■□□□□ 0.83
FAAP20-207ENST00000420515 GNPNAT1Q96EK6 184 aaPredicted RBP20.22■□□□□ 0.83
FAAP20-207ENST00000420515 PRKDCP78527 4128 aaKnown RBP20.21■□□□□ 0.83
FAAP20-207ENST00000420515 SOCS3O14543 225 aa20.21■□□□□ 0.83
FAAP20-207ENST00000420515 RPL7P18124 248 aaKnown RBP20.21■□□□□ 0.83
FAAP20-207ENST00000420515 M6PRP20645 277 aa20.21■□□□□ 0.83
FAAP20-207ENST00000420515 GALR1P47211 349 aa20.21■□□□□ 0.83
FAAP20-207ENST00000420515 ZNF124Q15973 351 aa20.21■□□□□ 0.83
FAAP20-207ENST00000420515 S100A7AQ86SG5 101 aa20.21■□□□□ 0.83
FAAP20-207ENST00000420515 FAM167A-AS1Q96KT0 104 aa20.21■□□□□ 0.83
FAAP20-207ENST00000420515 FUT9Q9Y231 359 aa20.21■□□□□ 0.83
FAAP20-207ENST00000420515 ACOT6Q3I5F7 207 aaPredicted RBP20.2■□□□□ 0.82
FAAP20-207ENST00000420515 GPR82Q96P67 336 aa20.2■□□□□ 0.82
FAAP20-207ENST00000420515 PLA2G2EQ9NZK7 142 aa20.2■□□□□ 0.82
FAAP20-207ENST00000420515 TRAV2A0A0B4J234 112 aa20.19■□□□□ 0.82
FAAP20-207ENST00000420515 H3BTX0 84 aa20.19■□□□□ 0.82
FAAP20-207ENST00000420515 PYYP10082 97 aa20.19■□□□□ 0.82
FAAP20-207ENST00000420515 SPP1P10451 314 aa20.19■□□□□ 0.82
FAAP20-207ENST00000420515 FAM122CQ6P4D5 195 aa20.19■□□□□ 0.82
FAAP20-207ENST00000420515 DEFB125Q8N687 156 aa20.19■□□□□ 0.82
FAAP20-207ENST00000420515 MAP6D1Q9H9H5 199 aa20.19■□□□□ 0.82
FAAP20-207ENST00000420515 ZNF688P0C7X2 276 aa20.18■□□□□ 0.82
FAAP20-207ENST00000420515 SERF2P84101 59 aa20.18■□□□□ 0.82
FAAP20-207ENST00000420515 BPIFA4PQ86YQ2 179 aa20.18■□□□□ 0.82
FAAP20-207ENST00000420515 OR10G4Q8NGN3 311 aa20.18■□□□□ 0.82
FAAP20-207ENST00000420515 OR10G9Q8NGN4 311 aa20.18■□□□□ 0.82
FAAP20-207ENST00000420515 OR10G7Q8NGN6 311 aa20.18■□□□□ 0.82
FAAP20-207ENST00000420515 CITED4Q96RK1 184 aa20.18■□□□□ 0.82
FAAP20-207ENST00000420515 MRPL32Q9BYC8 188 aaKnown RBP20.18■□□□□ 0.82
FAAP20-207ENST00000420515 H3BQ15 152 aa20.17■□□□□ 0.82
FAAP20-207ENST00000420515 ATF4P18848 351 aaPredicted RBP20.17■□□□□ 0.82
FAAP20-207ENST00000420515 IGFL4Q6B9Z1 124 aa20.17■□□□□ 0.82
FAAP20-207ENST00000420515 APRG1Q8IVJ8 170 aa20.17■□□□□ 0.82
FAAP20-207ENST00000420515 RPP25LQ8N5L8 163 aaKnown RBP20.17■□□□□ 0.82
FAAP20-207ENST00000420515 RPRMQ9NS64 109 aa20.17■□□□□ 0.82
FAAP20-207ENST00000420515 OR11H12B2RN74 326 aa20.17■□□□□ 0.82
FAAP20-207ENST00000420515 IGLC2P0DOY2 106 aa20.17■□□□□ 0.82
FAAP20-207ENST00000420515 SSX7Q7RTT5 188 aa20.17■□□□□ 0.82
FAAP20-207ENST00000420515 ZNF503Q96F45 646 aa20.17■□□□□ 0.82
FAAP20-207ENST00000420515 BOLA1Q9Y3E2 137 aa20.17■□□□□ 0.82
FAAP20-207ENST00000420515 A0A087X0K7 114 aa20.16■□□□□ 0.82
FAAP20-207ENST00000420515 HMGB3O15347 200 aaKnown RBP20.16■□□□□ 0.82
FAAP20-207ENST00000420515 RHOBP62745 196 aa20.16■□□□□ 0.82
FAAP20-207ENST00000420515 STOML3Q8TAV4 291 aa20.16■□□□□ 0.82
FAAP20-207ENST00000420515 MRAPQ8TCY5 172 aa20.16■□□□□ 0.82
FAAP20-207ENST00000420515 IGHV4-30-4P0DP06 118 aa20.15■□□□□ 0.82
FAAP20-207ENST00000420515 DEFB131AP59861 70 aa20.15■□□□□ 0.82
FAAP20-207ENST00000420515 TMEM41BQ5BJD5 291 aa20.15■□□□□ 0.82
FAAP20-207ENST00000420515 BAP18Q8IXM2 172 aa20.15■□□□□ 0.82
FAAP20-207ENST00000420515 ZNF586Q9NXT0 402 aa20.15■□□□□ 0.82
FAAP20-207ENST00000420515 AGRNO00468 2067 aa20.15■□□□□ 0.82
FAAP20-207ENST00000420515 TRAV8-2A0A0B4J237 113 aa20.14■□□□□ 0.81
FAAP20-207ENST00000420515 BOLA2-SMG1P6H3BVE0 249 aa20.14■□□□□ 0.81
FAAP20-207ENST00000420515 SLC17A3O00476 420 aa20.14■□□□□ 0.81
FAAP20-207ENST00000420515 C20orf173Q96LM9 149 aa20.14■□□□□ 0.81
FAAP20-207ENST00000420515 RNF24Q9Y225 148 aa20.14■□□□□ 0.81
FAAP20-207ENST00000420515 TPT1P13693 172 aaKnown RBP20.13■□□□□ 0.81
FAAP20-207ENST00000420515 HLA-DMBP28068 263 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms