RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 NHLH2Q02577 135 aa13.42□□□□□ -0.26
ECHDC3-202ENST00000420401 CSTL1Q9H114 145 aa13.42□□□□□ -0.26
ECHDC3-202ENST00000420401 SLC25A32Q9H2D1 315 aa13.42□□□□□ -0.26
ECHDC3-202ENST00000420401 H3BRN7 92 aa13.41□□□□□ -0.26
ECHDC3-202ENST00000420401 MPDU1O75352 247 aa13.41□□□□□ -0.26
ECHDC3-202ENST00000420401 MEOX2P50222 304 aa13.41□□□□□ -0.26
ECHDC3-202ENST00000420401 Q6ZRG5 221 aa13.41□□□□□ -0.26
ECHDC3-202ENST00000420401 OR5C1Q8NGR4 320 aa13.41□□□□□ -0.26
ECHDC3-202ENST00000420401 RSG1Q9BU20 258 aa13.41□□□□□ -0.26
ECHDC3-202ENST00000420401 RNF126Q9BV68 326 aa13.41□□□□□ -0.26
ECHDC3-202ENST00000420401 SCRT1Q9BWW7 348 aa13.41□□□□□ -0.26
ECHDC3-202ENST00000420401 ARV1Q9H2C2 271 aa13.41□□□□□ -0.26
ECHDC3-202ENST00000420401 ELOA3CA0A087WX78 387 aaPredicted RBP13.4□□□□□ -0.26
ECHDC3-202ENST00000420401 COX7A2P2O60397 106 aa13.4□□□□□ -0.26
ECHDC3-202ENST00000420401 RPL7P18124 248 aaKnown RBP13.4□□□□□ -0.26
ECHDC3-202ENST00000420401 CXCL3P19876 107 aa13.4□□□□□ -0.26
ECHDC3-202ENST00000420401 PSMB3P49720 205 aa13.4□□□□□ -0.26
ECHDC3-202ENST00000420401 CHAC2Q8WUX2 184 aa13.4□□□□□ -0.26
ECHDC3-202ENST00000420401 TP53TG1Q9Y2A0 90 aa13.4□□□□□ -0.26
ECHDC3-202ENST00000420401 ISLRO14498 428 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 SPRY2O43597 315 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 FGF7P21781 194 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 FCN2Q15485 313 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 ACTL10Q5JWF8 245 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 PATE2Q6UY27 113 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 THAP6Q8TBB0 222 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 LINC00052Q96N35 136 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 UHRF2Q96PU4 802 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 OVOL2Q9BRP0 275 aa13.39□□□□□ -0.27
ECHDC3-202ENST00000420401 STARD9Q9P2P6 4700 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 KNCNA6PVL3 124 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 SOCS3O14543 225 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 ATF4P18848 351 aaPredicted RBP13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 RPL29P47914 159 aaKnown RBP13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 PRR20EP86478 221 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 PRR20CP86479 221 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 PRR20DP86480 221 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 PRR20BP86481 221 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 PRR20AP86496 221 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 OXA1LQ15070 435 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 C10orf113Q5VZT2 155 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 MIC13Q5XKP0 118 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 LINC00305Q7Z4B0 112 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 C16orf92Q96LL3 132 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 DNAJC4Q9NNZ3 241 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 MBD2Q9UBB5 411 aa13.38□□□□□ -0.27
ECHDC3-202ENST00000420401 RPL12P30050 165 aaKnown RBP13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 B2MP61769 119 aa13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 CLINT1Q14677 625 aa13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 OPCMLQ14982 345 aa13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 DEFB135Q30KP9 77 aa13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 MORN3Q6PF18 240 aaPredicted RBP13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 TRPT1Q86TN4 253 aaKnown RBP13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 OR11H7Q8NGC8 314 aa13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 ASB13Q8WXK3 278 aa13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 TMEM37Q8WXS4 190 aa13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 RNF183Q96D59 192 aa13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 PFDN5Q99471 154 aa13.37□□□□□ -0.27
ECHDC3-202ENST00000420401 CA1P00915 261 aaPredicted RBP13.36□□□□□ -0.27
ECHDC3-202ENST00000420401 SPP1P10451 314 aa13.36□□□□□ -0.27
ECHDC3-202ENST00000420401 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.36□□□□□ -0.27
ECHDC3-202ENST00000420401 NPCDR1Q9BY65 106 aa13.36□□□□□ -0.27
ECHDC3-202ENST00000420401 EDA2RQ9HAV5 297 aa13.36□□□□□ -0.27
ECHDC3-202ENST00000420401 SLC39A9Q9NUM3 307 aa13.36□□□□□ -0.27
ECHDC3-202ENST00000420401 HSPB11Q9Y547 144 aa13.36□□□□□ -0.27
ECHDC3-202ENST00000420401 PXMP4Q9Y6I8 212 aa13.36□□□□□ -0.27
ECHDC3-202ENST00000420401 JTBO76095 146 aa13.35□□□□□ -0.27
ECHDC3-202ENST00000420401 FGL1Q08830 312 aa13.35□□□□□ -0.27
ECHDC3-202ENST00000420401 TMEM41BQ5BJD5 291 aa13.35□□□□□ -0.27
ECHDC3-202ENST00000420401 ZNF709Q8N972 641 aa13.35□□□□□ -0.27
ECHDC3-202ENST00000420401 GATAD1Q8WUU5 269 aa13.35□□□□□ -0.27
ECHDC3-202ENST00000420401 ATP5SQ99766 215 aa13.35□□□□□ -0.27
ECHDC3-202ENST00000420401 KRTAP17-1Q9BYP8 105 aa13.35□□□□□ -0.27
ECHDC3-202ENST00000420401 HYDINQ4G0P3 5121 aa13.34□□□□□ -0.27
ECHDC3-202ENST00000420401 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
ECHDC3-202ENST00000420401 BPIFA4PQ86YQ2 179 aa13.34□□□□□ -0.27
ECHDC3-202ENST00000420401 WDR61Q9GZS3 305 aaKnown RBP13.34□□□□□ -0.27
ECHDC3-202ENST00000420401 KCNIP2Q9NS61 270 aa13.34□□□□□ -0.27
ECHDC3-202ENST00000420401 RPRMQ9NS64 109 aa13.34□□□□□ -0.27
ECHDC3-202ENST00000420401 A0A087X0K7 114 aa13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 H3BMM0 161 aa13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 GIPP09681 153 aaPredicted RBP13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 HLA-DRB4P13762 266 aa13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 NUTF2P61970 127 aaKnown RBP13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 SPATA31B1PQ5VZV4 182 aa13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 LRRC20Q8TCA0 184 aa13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 C17orf77Q96MU5 243 aa13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 SAV1Q9H4B6 383 aaPredicted RBP13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 HLA-DRB4X5D2U9 266 aa13.33□□□□□ -0.28
ECHDC3-202ENST00000420401 C17orf112F2Z3M2 114 aa13.32□□□□□ -0.28
ECHDC3-202ENST00000420401 IFNA5P01569 189 aa13.32□□□□□ -0.28
ECHDC3-202ENST00000420401 EBLN2Q6P2I7 272 aa13.32□□□□□ -0.28
ECHDC3-202ENST00000420401 SCGB1C1Q8TD33 95 aa13.32□□□□□ -0.28
ECHDC3-202ENST00000420401 MRPS12O15235 138 aaKnown RBP13.31□□□□□ -0.28
ECHDC3-202ENST00000420401 IL17DQ8TAD2 202 aa13.31□□□□□ -0.28
ECHDC3-202ENST00000420401 C20orf173Q96LM9 149 aa13.31□□□□□ -0.28
ECHDC3-202ENST00000420401 SMIM3Q9BZL3 60 aa13.31□□□□□ -0.28
ECHDC3-202ENST00000420401 TRAV8-2A0A0B4J237 113 aa13.3□□□□□ -0.28
ECHDC3-202ENST00000420401 CXCL2P19875 107 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms