RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 SCRT1Q9BWW7 348 aa11.54□□□□□ -0.56
NOD1-204ENST00000419601 RPRMQ9NS64 109 aa11.54□□□□□ -0.56
NOD1-204ENST00000419601 XCL2Q9UBD3 114 aa11.54□□□□□ -0.56
NOD1-204ENST00000419601 X6R8D5 127 aa11.54□□□□□ -0.56
NOD1-204ENST00000419601 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
NOD1-204ENST00000419601 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
NOD1-204ENST00000419601 PVALBP20472 110 aaPredicted RBP11.53□□□□□ -0.56
NOD1-204ENST00000419601 BCAP31P51572 246 aa11.53□□□□□ -0.56
NOD1-204ENST00000419601 DEFB1P60022 68 aa11.53□□□□□ -0.56
NOD1-204ENST00000419601 SLC38A11Q08AI6 406 aa11.53□□□□□ -0.56
NOD1-204ENST00000419601 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
NOD1-204ENST00000419601 EBLN2Q6P2I7 272 aa11.53□□□□□ -0.56
NOD1-204ENST00000419601 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
NOD1-204ENST00000419601 ZNF546Q86UE3 836 aa11.53□□□□□ -0.56
NOD1-204ENST00000419601 ENKURQ8TC29 256 aa11.53□□□□□ -0.56
NOD1-204ENST00000419601 PLECQ15149 4684 aaKnown RBP11.53□□□□□ -0.56
NOD1-204ENST00000419601 GOSR2O14653 212 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 IGKV3-20P01619 116 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 RPL7P18124 248 aaKnown RBP11.52□□□□□ -0.57
NOD1-204ENST00000419601 CAV2P51636 162 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 PXDC1Q5TGL8 231 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 OR4B1Q8NGF8 309 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 LINC00476Q8WZB0 136 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 C17orf77Q96MU5 243 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 ARL6Q9H0F7 186 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 HRH4Q9H3N8 390 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 C11orf1Q9H5F2 150 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 GPN1Q9HCN4 374 aaPredicted RBP11.52□□□□□ -0.57
NOD1-204ENST00000419601 RNF24Q9Y225 148 aa11.52□□□□□ -0.57
NOD1-204ENST00000419601 A0A0J9YX75 114 aa11.51□□□□□ -0.57
NOD1-204ENST00000419601 AGPAT2O15120 278 aa11.51□□□□□ -0.57
NOD1-204ENST00000419601 S100A10P60903 97 aa11.51□□□□□ -0.57
NOD1-204ENST00000419601 IL15RAQ13261 267 aa11.51□□□□□ -0.57
NOD1-204ENST00000419601 UHRF2Q96PU4 802 aa11.51□□□□□ -0.57
NOD1-204ENST00000419601 ALMS1Q8TCU4 4167 aa11.51□□□□□ -0.57
NOD1-204ENST00000419601 F6UB75 175 aa11.5□□□□□ -0.57
NOD1-204ENST00000419601 CST7O76096 145 aa11.5□□□□□ -0.57
NOD1-204ENST00000419601 FAM78BQ5VT40 261 aa11.5□□□□□ -0.57
NOD1-204ENST00000419601 PATE2Q6UY27 113 aa11.5□□□□□ -0.57
NOD1-204ENST00000419601 C20orf173Q96LM9 149 aa11.5□□□□□ -0.57
NOD1-204ENST00000419601 ARV1Q9H2C2 271 aa11.5□□□□□ -0.57
NOD1-204ENST00000419601 LYRM2Q9NU23 88 aaPredicted RBP11.5□□□□□ -0.57
NOD1-204ENST00000419601 HYDINQ4G0P3 5121 aa11.5□□□□□ -0.57
NOD1-204ENST00000419601 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
NOD1-204ENST00000419601 FAM24AA6NFZ4 105 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 PSG9Q00887 426 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 IFITM3Q01628 133 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 FGL1Q08830 312 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 RAB31Q13636 194 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 RAB32Q13637 225 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 ZNF705AQ6ZN79 300 aaPredicted RBP11.49□□□□□ -0.57
NOD1-204ENST00000419601 ZNF709Q8N972 641 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 MGST2Q99735 147 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 SLC35B3Q9H1N7 401 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 UQCC1Q9NVA1 299 aa11.49□□□□□ -0.57
NOD1-204ENST00000419601 A0A087X0K7 114 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 TRAV8-2A0A0B4J237 113 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 ZNF705FA8MVS1 300 aaPredicted RBP11.48□□□□□ -0.57
NOD1-204ENST00000419601 C11orf94C9JXX5 98 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 COX7A2P2O60397 106 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 PRAF2O60831 178 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 LY6G6CO95867 125 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 ZNF705DP0CH99 300 aaPredicted RBP11.48□□□□□ -0.57
NOD1-204ENST00000419601 ZNF705BP0CI00 300 aaPredicted RBP11.48□□□□□ -0.57
NOD1-204ENST00000419601 CAMLGP49069 296 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 SULT1A1P50225 295 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 FXYD7P58549 80 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 NRARPQ7Z6K4 114 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 STX12Q86Y82 276 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 NEU1Q99519 415 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 BATF3Q9NR55 127 aa11.48□□□□□ -0.57
NOD1-204ENST00000419601 SMIM9A6NGZ8 99 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 A8MTW9 85 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
NOD1-204ENST00000419601 HLA-DMBP28068 263 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 S100A11P31949 105 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 HBG1P69891 147 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 HBG2P69892 147 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 VWC2Q2TAL6 325 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 LINC00305Q7Z4B0 112 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 TMEM252Q8N6L7 170 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 C2CD4CQ8TF44 421 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 KRTAP17-1Q9BYP8 105 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
NOD1-204ENST00000419601 IGSF23A1L1A6 192 aa11.46□□□□□ -0.57
NOD1-204ENST00000419601 INMT-MINDY4F8WBC2 141 aa11.46□□□□□ -0.57
NOD1-204ENST00000419601 DEFA1P59665 94 aa11.46□□□□□ -0.57
NOD1-204ENST00000419601 DEFA3P59666 94 aa11.46□□□□□ -0.57
NOD1-204ENST00000419601 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.57
NOD1-204ENST00000419601 Q6ZRG5 221 aa11.46□□□□□ -0.57
NOD1-204ENST00000419601 RNF182Q8N6D2 247 aa11.46□□□□□ -0.57
NOD1-204ENST00000419601 LRRC20Q8TCA0 184 aa11.46□□□□□ -0.57
NOD1-204ENST00000419601 IGHV3OR16-12A0A075B7B8 117 aa11.45□□□□□ -0.58
NOD1-204ENST00000419601 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
NOD1-204ENST00000419601 MRPS12O15235 138 aaKnown RBP11.45□□□□□ -0.58
NOD1-204ENST00000419601 AMBPP02760 352 aa11.45□□□□□ -0.58
NOD1-204ENST00000419601 CXCL2P19875 107 aa11.45□□□□□ -0.58
NOD1-204ENST00000419601 CXCL3P19876 107 aa11.45□□□□□ -0.58
NOD1-204ENST00000419601 CNN1P51911 297 aaKnown RBP11.45□□□□□ -0.58
NOD1-204ENST00000419601 TCTAP57738 103 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms