RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 SLC39A9Q9NUM3 307 aa13.97□□□□□ -0.17
SEMA3B-202ENST00000418576 HIGD1AQ9Y241 93 aa13.97□□□□□ -0.17
SEMA3B-202ENST00000418576 ELOA3CA0A087WX78 387 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-202ENST00000418576 TRAV25A0A0B4J276 109 aa13.96□□□□□ -0.17
SEMA3B-202ENST00000418576 ZNF705EA8MWA4 302 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-202ENST00000418576 BUB3O43684 328 aa13.96□□□□□ -0.17
SEMA3B-202ENST00000418576 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-202ENST00000418576 CMYA5Q8N3K9 4069 aa13.96□□□□□ -0.17
SEMA3B-202ENST00000418576 COX7A2P2O60397 106 aa13.96□□□□□ -0.18
SEMA3B-202ENST00000418576 SEC11BP0C7V7 166 aa13.96□□□□□ -0.18
SEMA3B-202ENST00000418576 BEAN1Q3B7T3 259 aa13.96□□□□□ -0.18
SEMA3B-202ENST00000418576 KPRPQ5T749 579 aaPredicted RBP13.96□□□□□ -0.18
SEMA3B-202ENST00000418576 TMEM61Q8N0U2 210 aa13.96□□□□□ -0.18
SEMA3B-202ENST00000418576 OR1L4Q8NGR5 311 aa13.96□□□□□ -0.18
SEMA3B-202ENST00000418576 PFDN5Q99471 154 aa13.96□□□□□ -0.18
SEMA3B-202ENST00000418576 RNF24Q9Y225 148 aa13.96□□□□□ -0.18
SEMA3B-202ENST00000418576 SELENOKQ9Y6D0 94 aa13.96□□□□□ -0.18
SEMA3B-202ENST00000418576 SPP1P10451 314 aa13.95□□□□□ -0.18
SEMA3B-202ENST00000418576 RPL11P62913 178 aaKnown RBP13.95□□□□□ -0.18
SEMA3B-202ENST00000418576 C1orf194Q5T5A4 169 aa13.95□□□□□ -0.18
SEMA3B-202ENST00000418576 RSG1Q9BU20 258 aa13.95□□□□□ -0.18
SEMA3B-202ENST00000418576 DNAJC4Q9NNZ3 241 aa13.95□□□□□ -0.18
SEMA3B-202ENST00000418576 ZNF256Q9Y2P7 627 aaPredicted RBP13.95□□□□□ -0.18
SEMA3B-202ENST00000418576 HELTA6NFD8 242 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 C10orf113Q5VZT2 155 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 C16orf54Q6UWD8 224 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 TCF24Q7RTU0 167 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 SLC25A39Q9BZJ4 359 aaPredicted RBP13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 IZUMO1RA6ND01 250 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 PAFAH1B2P68402 229 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 GUCA2BQ16661 112 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 OR8I2Q8N0Y5 310 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 HSD17B11Q8NBQ5 300 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 TIMM9Q9Y5J7 89 aa13.94□□□□□ -0.18
SEMA3B-202ENST00000418576 ZNF98A6NK75 572 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 H2AFB1P0C5Y9 115 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 GP9P14770 177 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 KRTAP10-11P60412 298 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 BLOC1S1P78537 153 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 PATE2Q6UY27 113 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 LINC00305Q7Z4B0 112 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 IQCF2Q8IXL9 164 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 CLRN3Q8NCR9 226 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 LYPD6BQ8NI32 183 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 GATAD1Q8WUU5 269 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 TMEM37Q8WXS4 190 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 UHRF2Q96PU4 802 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 SPAG8Q99932 426 aaPredicted RBP13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 SHANK2-AS3Q9BTD1 123 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 SLC25A22Q9H936 323 aa13.93□□□□□ -0.18
SEMA3B-202ENST00000418576 FAM90A2PQ658T7 463 aa13.92□□□□□ -0.18
SEMA3B-202ENST00000418576 SIGLEC15Q6ZMC9 328 aa13.92□□□□□ -0.18
SEMA3B-202ENST00000418576 GLMPQ8WWB7 406 aa13.92□□□□□ -0.18
SEMA3B-202ENST00000418576 IGKV3-7A0A075B6H7 116 aa13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 H3BRN7 92 aa13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 GNPNAT1Q96EK6 184 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 GPR82Q96P67 336 aa13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 SH3BGRL3Q9H299 93 aa13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 ZNF785A8K8V0 405 aa13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 DNASE2O00115 360 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 APOC3P02656 99 aa13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 FLI1Q01543 452 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 FFAR4Q5NUL3 377 aa13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 GTSCR1Q86UQ5 136 aa13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 PSMG3Q9BT73 122 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-202ENST00000418576 OR4C46A6NHA9 309 aa13.9□□□□□ -0.18
SEMA3B-202ENST00000418576 ATP6V0CP27449 155 aa13.9□□□□□ -0.18
SEMA3B-202ENST00000418576 SCRT1Q9BWW7 348 aa13.9□□□□□ -0.18
SEMA3B-202ENST00000418576 HRH4Q9H3N8 390 aa13.9□□□□□ -0.18
SEMA3B-202ENST00000418576 RPL7P18124 248 aaKnown RBP13.89□□□□□ -0.19
SEMA3B-202ENST00000418576 GALR1P47211 349 aa13.89□□□□□ -0.19
SEMA3B-202ENST00000418576 RAB5CP51148 216 aa13.89□□□□□ -0.19
SEMA3B-202ENST00000418576 LEMD1Q68G75 181 aa13.89□□□□□ -0.19
SEMA3B-202ENST00000418576 GBGT1Q8N5D6 347 aa13.89□□□□□ -0.19
SEMA3B-202ENST00000418576 NKX6-2Q9C056 277 aaPredicted RBP13.89□□□□□ -0.19
SEMA3B-202ENST00000418576 MS4A6AQ9H2W1 248 aa13.89□□□□□ -0.19
SEMA3B-202ENST00000418576 TMEM218A2RU14 115 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 SERF2P84101 59 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 SRSF3P84103 164 aaKnown RBP13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 ACOT6Q3I5F7 207 aaPredicted RBP13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 C10orf91Q5T1B1 145 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 SVBPQ8N300 66 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 STXBP6Q8NFX7 210 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 PRR25Q96S07 402 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 SORL1Q92673 2214 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 NOTCH1P46531 2555 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 TFPI2P48307 235 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 GCSAMLQ5JQS6 135 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 FAM78BQ5VT40 261 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 OR2G3Q8NGZ4 309 aa13.88□□□□□ -0.19
SEMA3B-202ENST00000418576 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
SEMA3B-202ENST00000418576 MBP02144 154 aa13.87□□□□□ -0.19
SEMA3B-202ENST00000418576 MRPL32Q9BYC8 188 aaKnown RBP13.87□□□□□ -0.19
SEMA3B-202ENST00000418576 NRN1Q9NPD7 142 aa13.87□□□□□ -0.19
SEMA3B-202ENST00000418576 NBEAL1Q6ZS30 2694 aa13.87□□□□□ -0.19
SEMA3B-202ENST00000418576 ADCYAP1P18509 176 aa13.86□□□□□ -0.19
SEMA3B-202ENST00000418576 BPIFA4PQ86YQ2 179 aa13.86□□□□□ -0.19
SEMA3B-202ENST00000418576 WFDC3Q8IUB2 231 aa13.86□□□□□ -0.19
SEMA3B-202ENST00000418576 SEPSECSQ9HD40 501 aaKnown RBP13.86□□□□□ -0.19
SEMA3B-202ENST00000418576 AURKAIP1Q9NWT8 199 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms