RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 EMP1P54849 157 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 PLP1P60201 277 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 SELENOTP62341 195 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 DLK1P80370 383 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 TMEM14EPQ6UXP3 125 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 S100A7AQ86SG5 101 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 SLC25A39Q9BZJ4 359 aaPredicted RBP12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 NPVFQ9HCQ7 196 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 HIGD1AQ9Y241 93 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 A8MTW9 85 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 FNDC10F2Z333 226 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 HYPMO75409 117 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 DUSP14O95147 198 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 SCGB1D2O95969 90 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 IL7P13232 177 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 TAS2R30P59541 319 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 IAH1Q2TAA2 248 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 C1orf158Q8N1D5 194 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 OR10P1Q8NGE3 313 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 SHANK2-AS3Q9BTD1 123 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 NDUFAF3Q9BU61 184 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 SCRT1Q9BWW7 348 aa12.59□□□□□ -0.39
PDLIM2-208ENST00000416159 HBE1P02100 147 aa12.58□□□□□ -0.4
PDLIM2-208ENST00000416159 METTL15P1P0C7V9 234 aa12.58□□□□□ -0.4
PDLIM2-208ENST00000416159 RPL7P18124 248 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-208ENST00000416159 RRAS2P62070 204 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-208ENST00000416159 ZBTB8BQ8NAP8 495 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-208ENST00000416159 MITD1Q8WV92 249 aa12.58□□□□□ -0.4
PDLIM2-208ENST00000416159 GSKIPQ9P0R6 139 aa12.58□□□□□ -0.4
PDLIM2-208ENST00000416159 MGAT4CQ9UBM8 478 aa12.58□□□□□ -0.4
PDLIM2-208ENST00000416159 DKK2Q9UBU2 259 aa12.58□□□□□ -0.4
PDLIM2-208ENST00000416159 TSC22D2O75157 780 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 CCNKO75909 580 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 OR5G3P0C626 314 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 LINC00869P0C866 280 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 P0DMU3 169 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 FAM231AP0DMU4 169 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 FAM231CP0DMU5 169 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 FGL1Q08830 312 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 AMTNQ6UX39 209 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 IGF2BP2-AS1Q96M15 143 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 NIPSNAP3BQ9BS92 247 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 RNF24Q9Y225 148 aa12.57□□□□□ -0.4
PDLIM2-208ENST00000416159 VPS13DQ5THJ4 4388 aa12.56□□□□□ -0.4
PDLIM2-208ENST00000416159 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
PDLIM2-208ENST00000416159 K7EPK0 472 aa12.56□□□□□ -0.4
PDLIM2-208ENST00000416159 OXA1LQ15070 435 aa12.56□□□□□ -0.4
PDLIM2-208ENST00000416159 FAM222AQ5U5X8 452 aa12.56□□□□□ -0.4
PDLIM2-208ENST00000416159 TEPPQ6URK8 271 aa12.56□□□□□ -0.4
PDLIM2-208ENST00000416159 FAM210BQ96KR6 192 aa12.56□□□□□ -0.4
PDLIM2-208ENST00000416159 LOC102723971A0A1B0GUV8 181 aa12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 CNN1P51911 297 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 PXDC1Q5TGL8 231 aa12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 IGFL4Q6B9Z1 124 aa12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 OR11H7Q8NGC8 314 aa12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 TMEM208Q9BTX3 173 aa12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 GGACTQ9BVM4 153 aa12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 NDUFA13Q9P0J0 144 aa12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 RCL1Q9Y2P8 373 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 DNAH6Q9C0G6 4158 aa12.55□□□□□ -0.4
PDLIM2-208ENST00000416159 A0A087X0K7 114 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 PLA2G10O15496 165 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 LYRM1O43325 122 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 MBPP02686 304 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 B2MP61769 119 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 ZNF846Q147U1 533 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 RNF182Q8N6D2 247 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 POM121L12Q8N7R1 296 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 ZNF738Q8NE65 137 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 UHRF2Q96PU4 802 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 ARL6Q9H0F7 186 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 C20orf85Q9H1P6 137 aa12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 YTHDF2Q9Y5A9 579 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-208ENST00000416159 DNAH10Q8IVF4 4471 aa12.53□□□□□ -0.4
PDLIM2-208ENST00000416159 C7orf66A4D0T2 115 aa12.53□□□□□ -0.4
PDLIM2-208ENST00000416159 GOSR2O14653 212 aa12.53□□□□□ -0.4
PDLIM2-208ENST00000416159 PATE2Q6UY27 113 aa12.53□□□□□ -0.4
PDLIM2-208ENST00000416159 LRRC20Q8TCA0 184 aa12.53□□□□□ -0.4
PDLIM2-208ENST00000416159 ARV1Q9H2C2 271 aa12.53□□□□□ -0.4
PDLIM2-208ENST00000416159 FRAS1Q86XX4 4008 aa12.53□□□□□ -0.4
PDLIM2-208ENST00000416159 L7N2F9 121 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 INSP01308 110 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 TCRBP04435 133 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 CXCL3P19876 107 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 VAMP2P63027 116 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 SLC38A11Q08AI6 406 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 ARL16Q0P5N6 197 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 PSG3Q16557 428 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 SPINK13Q1W4C9 94 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 ZNF546Q86UE3 836 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 PLA2G2EQ9NZK7 142 aa12.52□□□□□ -0.41
PDLIM2-208ENST00000416159 M0R2Z0 102 aa12.51□□□□□ -0.41
PDLIM2-208ENST00000416159 AGPAT2O15120 278 aa12.51□□□□□ -0.41
PDLIM2-208ENST00000416159 CRXO43186 299 aaPredicted RBP12.51□□□□□ -0.41
PDLIM2-208ENST00000416159 OR8A1Q8NGG7 326 aa12.51□□□□□ -0.41
PDLIM2-208ENST00000416159 FAM25EA8MYX2 175 aa12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 BOLA2-SMG1P6H3BVE0 249 aa12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 CCSO14618 274 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms