RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 PSMB11A5LHX3 300 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 NPIPB5A8MRT5 1133 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 SOX15O60248 233 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 PF4P02776 101 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 CD28P10747 220 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 SELENOTP62341 195 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 ECSCRQ19T08 205 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 LEMD1Q68G75 181 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 ACSM6Q6P461 480 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 SSX7Q7RTT5 188 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 TTC9CQ8N5M4 171 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 CYB561D1Q8N8Q1 229 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 VSIRQ9H7M9 311 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 NPVFQ9HCQ7 196 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 LINC00527Q9UJ94 153 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 FNDC10F2Z333 226 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 I3L2K1 104 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 K7EIM0 57 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 MT-CO2P00403 227 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 PPBPP02775 128 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 DEFA4P12838 97 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 ELLP55199 621 aaPredicted RBP7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 C19orf54Q5BKX5 351 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 UNQ5815/PRO19632Q6UWF5 114 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 SMIM15Q7Z3B0 74 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 ORAOV1Q8WV07 137 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 CACNG8Q8WXS5 425 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 BTF3L4Q96K17 158 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 PSMG3Q9BT73 122 aaPredicted RBP7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 GGTLC1Q9BX51 225 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 NAGKQ9UJ70 344 aa7.18□□□□□ -1.26
CHRNA1-206ENST00000416004 IGLV11-55A0A075B6I3 123 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 LOC102723971A0A1B0GUV8 181 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 TMEM238LA0A1B0GVL6 79 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 IGHG2P01859 326 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 CD33P20138 364 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 TMEM95Q3KNT9 176 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 GCSAMLQ5JQS6 135 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 MIC13Q5XKP0 118 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 TEPPQ6URK8 271 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 TMEM144Q7Z5S9 345 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 GBGT1Q8N5D6 347 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 OR2D3Q8NGH3 330 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 NPIPB3Q92617 1050 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 SLC35E1Q96K37 410 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 CITED2Q99967 270 aaPredicted RBP7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 RPRMQ9NS64 109 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 TIMM9Q9Y5J7 89 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 S4R3C0 116 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 IGKV1D-37A0A075B6S9 117 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 A0A1W2PRX2 142 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 C20orf202A1L168 122 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 CIDEAO60543 219 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 NDUFB8O95169 186 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 RPL29P47914 159 aaKnown RBP7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 PMS2P11Q13670 270 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 ZNF705AQ6ZN79 300 aaPredicted RBP7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 ZNF709Q8N972 641 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 SDF2L1Q9HCN8 221 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 DNAJC4Q9NNZ3 241 aa7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 AURKAIP1Q9NWT8 199 aaPredicted RBP7.17□□□□□ -1.26
CHRNA1-206ENST00000416004 TRAV41A0A0B4J266 112 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 HSBP1L1C9JCN9 74 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 CORTO00230 105 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 MPDU1O75352 247 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 OR2J3O76001 311 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 TYMSP04818 313 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 PFN1P07737 140 aaKnown RBP7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 GATA2P23769 480 aaPredicted RBP7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 CRIP2P52943 208 aaPredicted RBP7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 SERF2P84101 59 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 ZNF726P1Q15940 193 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 ACTL10Q5JWF8 245 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 FFAR4Q5NUL3 377 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 FAM90A2PQ658T7 463 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 THAP8Q8NA92 274 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 SLC45A2Q9UMX9 530 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 PXMP4Q9Y6I8 212 aa7.16□□□□□ -1.26
CHRNA1-206ENST00000416004 SCGB1D1O95968 90 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 IGF1P05019 195 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 LINC00869P0C866 280 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 RPS20P60866 119 aaKnown RBP7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 CCL20P78556 96 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 PRR20EP86478 221 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 PRR20CP86479 221 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 PRR20DP86480 221 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 PRR20BP86481 221 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 PRR20AP86496 221 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 ZNF90Q03938 601 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 OR5I1Q13606 314 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 TMEM183BQ1AE95 376 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 TEX43Q6ZNM6 134 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 RPP25LQ8N5L8 163 aaKnown RBP7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 STPG3Q8N7X2 389 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 TMEM116Q8NCL8 245 aa7.15□□□□□ -1.26
CHRNA1-206ENST00000416004 A0A1B0GV50 99 aa7.15□□□□□ -1.27
CHRNA1-206ENST00000416004 C17orf112F2Z3M2 114 aa7.15□□□□□ -1.27
CHRNA1-206ENST00000416004 F8W735 103 aaPredicted RBP7.15□□□□□ -1.27
CHRNA1-206ENST00000416004 TMEM41BQ5BJD5 291 aa7.15□□□□□ -1.27
CHRNA1-206ENST00000416004 ETFRF1Q6IPR1 90 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms