RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 EWSR1Q01844 656 aaKnown RBP eCLIP8.17□□□□□ -1.1
RFFL-204ENST00000414419 ARL16Q0P5N6 197 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 RAB32Q13637 225 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 PXDC1Q5TGL8 231 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 SPATA31B1PQ5VZV4 182 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 STX12Q86Y82 276 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 OR4B1Q8NGF8 309 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 C11orf45Q8TAV5 145 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 LRRC20Q8TCA0 184 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 SHANK2-AS3Q9BTD1 123 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 SCRT1Q9BWW7 348 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 SAV1Q9H4B6 383 aaPredicted RBP8.17□□□□□ -1.1
RFFL-204ENST00000414419 XCL2Q9UBD3 114 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 KLK5Q9Y337 293 aaPredicted RBP8.17□□□□□ -1.1
RFFL-204ENST00000414419 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 SOCS3O14543 225 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 DEFB4AO15263 64 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 GIG44P09565 113 aaPredicted RBP8.16□□□□□ -1.1
RFFL-204ENST00000414419 MIFP14174 115 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 S100A11P31949 105 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 SULT1A1P50225 295 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 GDF5OSQ5U4N7 250 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 CEMP1Q6PRD7 247 aaPredicted RBP8.16□□□□□ -1.1
RFFL-204ENST00000414419 Q6ZRG5 221 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 UHRF2Q96PU4 802 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 ARV1Q9H2C2 271 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 LYRM2Q9NU23 88 aaPredicted RBP8.16□□□□□ -1.1
RFFL-204ENST00000414419 UQCC1Q9NVA1 299 aa8.16□□□□□ -1.1
RFFL-204ENST00000414419 COX7A2P2O60397 106 aa8.15□□□□□ -1.1
RFFL-204ENST00000414419 CAMLGP49069 296 aa8.15□□□□□ -1.1
RFFL-204ENST00000414419 DEFB1P60022 68 aa8.15□□□□□ -1.1
RFFL-204ENST00000414419 CYCSP99999 105 aaKnown RBP8.15□□□□□ -1.1
RFFL-204ENST00000414419 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.15□□□□□ -1.1
RFFL-204ENST00000414419 TMEM252Q8N6L7 170 aa8.15□□□□□ -1.1
RFFL-204ENST00000414419 ELOA3CA0A087WX78 387 aaPredicted RBP8.14□□□□□ -1.11
RFFL-204ENST00000414419 IGHV4-28A0A0C4DH34 117 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 ZNF705EA8MWA4 302 aaPredicted RBP8.14□□□□□ -1.11
RFFL-204ENST00000414419 F6UB75 175 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 SSNA1O43805 119 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 SIX6O95475 246 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 FXYD7P58549 80 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 NANOS2P60321 138 aaKnown RBP8.14□□□□□ -1.11
RFFL-204ENST00000414419 PSG9Q00887 426 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 BAXQ07812 192 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 IL15RAQ13261 267 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 ATP6V1FQ16864 119 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 FAM78BQ5VT40 261 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 C10orf113Q5VZT2 155 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 LINC00305Q7Z4B0 112 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 Q8NAQ8 132 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 CSNK1G2-AS1Q8NCQ2 148 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 PHLDA1Q8WV24 401 aaPredicted RBP8.14□□□□□ -1.11
RFFL-204ENST00000414419 CLUHP3Q96NS8 147 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 MGST2Q99735 147 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 MARVELD1Q9BSK0 173 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 NMES1Q9C002 83 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 SLC25A31Q9H0C2 315 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 C11orf1Q9H5F2 150 aa8.14□□□□□ -1.11
RFFL-204ENST00000414419 IGHV3OR16-12A0A075B7B8 117 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 A0A0J9YX75 114 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 UBE2L5PA0A1B0GUS4 154 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 IGSF23A1L1A6 192 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 E5RGE8 158 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 DUSP14O95147 198 aaKnown RBP8.13□□□□□ -1.11
RFFL-204ENST00000414419 LRRC37A5PQ49AS3 106 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 PATE2Q6UY27 113 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 BPIFA4PQ86YQ2 179 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 ZNF738Q8NE65 137 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 OR1L4Q8NGR5 311 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 C20orf173Q96LM9 149 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 PFDN5Q99471 154 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 DNAJC4Q9NNZ3 241 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 WDR83OSQ9Y284 106 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 X6R8D5 127 aa8.13□□□□□ -1.11
RFFL-204ENST00000414419 A0A087X0K7 114 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 RBMY1A1P0DJD3 496 aaKnown RBP8.12□□□□□ -1.11
RFFL-204ENST00000414419 RBMY1CP0DJD4 496 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 FGF7P21781 194 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 RBMY1FQ15415 496 aaKnown RBP8.12□□□□□ -1.11
RFFL-204ENST00000414419 VWC2Q2TAL6 325 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 MIC13Q5XKP0 118 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 IGFL4Q6B9Z1 124 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 SLC35B3Q9H1N7 401 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 HRH4Q9H3N8 390 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 GOLT1BQ9Y3E0 138 aa8.12□□□□□ -1.11
RFFL-204ENST00000414419 STARD9Q9P2P6 4700 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 SMIM9A6NGZ8 99 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 C11orf94C9JXX5 98 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 MPDU1O75352 247 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 B2MP61769 119 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 LCN15Q6UWW0 184 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 TMEM37Q8WXS4 190 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 C17orf77Q96MU5 243 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 SLC50A1Q9BRV3 221 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 TMEM208Q9BTX3 173 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 PPP1R14DQ9NXH3 145 aa8.11□□□□□ -1.11
RFFL-204ENST00000414419 TRAV8-2A0A0B4J237 113 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 LY6G6CO95867 125 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 AMBPP02760 352 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 381.9 ms