RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TMEM182Q6ZP80 229 aaPredicted RBP8.46□□□□□ -1.06
LIMS2-210ENST00000413578 MYCBP2O75592 4640 aa8.46□□□□□ -1.06
LIMS2-210ENST00000413578 CTDSP2O14595 271 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 CTDSPLO15194 276 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 BTF3P20290 206 aaKnown RBP8.45□□□□□ -1.06
LIMS2-210ENST00000413578 GGNBP1Q5YKI7 109 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 IGFL4Q6B9Z1 124 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 SSX7Q7RTT5 188 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 GPR141Q7Z602 305 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 OR1B1Q8NGR6 318 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 GPR82Q96P67 336 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 Q9H8V8 135 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 SLC25A22Q9H936 323 aa8.45□□□□□ -1.06
LIMS2-210ENST00000413578 DMBT1Q9UGM3 2413 aaPredicted RBP8.44□□□□□ -1.06
LIMS2-210ENST00000413578 TRAV12-2A0A075B6T6 113 aa8.44□□□□□ -1.06
LIMS2-210ENST00000413578 BOLA2-SMG1P6H3BVE0 249 aa8.44□□□□□ -1.06
LIMS2-210ENST00000413578 GATA2P23769 480 aaPredicted RBP8.44□□□□□ -1.06
LIMS2-210ENST00000413578 TAS2R60P59551 318 aa8.44□□□□□ -1.06
LIMS2-210ENST00000413578 SRPXP78539 464 aa8.44□□□□□ -1.06
LIMS2-210ENST00000413578 CLVS1Q8IUQ0 354 aaPredicted RBP8.44□□□□□ -1.06
LIMS2-210ENST00000413578 RNF182Q8N6D2 247 aa8.44□□□□□ -1.06
LIMS2-210ENST00000413578 LINC00612Q8N6U2 182 aa8.44□□□□□ -1.06
LIMS2-210ENST00000413578 OR1S1Q8NH92 325 aa8.44□□□□□ -1.06
LIMS2-210ENST00000413578 UPK3BQ9BT76 320 aa8.44□□□□□ -1.06
LIMS2-210ENST00000413578 Q9H3A6 140 aa8.44□□□□□ -1.06
LIMS2-210ENST00000413578 ANKRD20A5PA0PJZ0 165 aa8.43□□□□□ -1.06
LIMS2-210ENST00000413578 H3BRN7 92 aa8.43□□□□□ -1.06
LIMS2-210ENST00000413578 IAPPP10997 89 aa8.43□□□□□ -1.06
LIMS2-210ENST00000413578 AKR1C4P17516 323 aa8.43□□□□□ -1.06
LIMS2-210ENST00000413578 RAB11AP62491 216 aa8.43□□□□□ -1.06
LIMS2-210ENST00000413578 RNASE8Q8TDE3 154 aaKnown RBP8.43□□□□□ -1.06
LIMS2-210ENST00000413578 ZNF503Q96F45 646 aa8.43□□□□□ -1.06
LIMS2-210ENST00000413578 SLC25A39Q9BZJ4 359 aaPredicted RBP8.43□□□□□ -1.06
LIMS2-210ENST00000413578 DUXBA0A1W2PPF3 345 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 A0A1W2PPQ1 181 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 SLC25A6P12236 298 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 ORM2P19652 201 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 CXCL3P19876 107 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 TTC32Q5I0X7 151 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 TMEM256Q8N2U0 113 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 LRTM2Q8N967 370 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 BPIFCQ8NFQ6 507 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 OR8A1Q8NGG7 326 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 C16orf74Q96GX8 76 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 SCGB3A2Q96PL1 93 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 SHANK2-AS3Q9BTD1 123 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 SCP2D1Q9UJQ7 156 aa8.42□□□□□ -1.06
LIMS2-210ENST00000413578 TIMM8BQ9Y5J9 83 aaPredicted RBP8.42□□□□□ -1.06
LIMS2-210ENST00000413578 RGS5O15539 181 aa8.41□□□□□ -1.06
LIMS2-210ENST00000413578 SMIM18P0DKX4 95 aa8.41□□□□□ -1.06
LIMS2-210ENST00000413578 CLINT1Q14677 625 aa8.41□□□□□ -1.06
LIMS2-210ENST00000413578 ZNF493Q6ZR52 646 aa8.41□□□□□ -1.06
LIMS2-210ENST00000413578 ZNF738Q8NE65 137 aa8.41□□□□□ -1.06
LIMS2-210ENST00000413578 RXFP4Q8TDU9 374 aa8.41□□□□□ -1.06
LIMS2-210ENST00000413578 TMEM263Q8WUH6 116 aaKnown RBP8.41□□□□□ -1.06
LIMS2-210ENST00000413578 LINC01587Q99440 93 aa8.41□□□□□ -1.06
LIMS2-210ENST00000413578 TMEM147Q9BVK8 224 aa8.41□□□□□ -1.06
LIMS2-210ENST00000413578 NOP10Q9NPE3 64 aaKnown RBP8.41□□□□□ -1.06
LIMS2-210ENST00000413578 A0A087X0K7 114 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 ANXA3P12429 323 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 M6PRP20645 277 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 PLP1P60201 277 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 HIST1H1AQ02539 215 aaPredicted RBP8.4□□□□□ -1.06
LIMS2-210ENST00000413578 IL18Q14116 193 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 ESRGQ1W209 222 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 Q6ZRN7 208 aaPredicted RBP8.4□□□□□ -1.06
LIMS2-210ENST00000413578 ACOT7LQ6ZUV0 252 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 TMEM144Q7Z5S9 345 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 CIB3Q96Q77 187 aaPredicted RBP8.4□□□□□ -1.06
LIMS2-210ENST00000413578 SOSTQ9BQB4 213 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 RABL2AQ9UBK7 228 aaPredicted RBP8.4□□□□□ -1.06
LIMS2-210ENST00000413578 RABL2BQ9UNT1 228 aa8.4□□□□□ -1.06
LIMS2-210ENST00000413578 TRAV26-1A0A087WT03 109 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 PIGBOS1A0A0B4J2F0 54 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 H3BNG1 76 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 ZNF701M0R085 212 aaPredicted RBP8.39□□□□□ -1.07
LIMS2-210ENST00000413578 MRPS12O15235 138 aaKnown RBP8.39□□□□□ -1.07
LIMS2-210ENST00000413578 SYNGR2O43760 224 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 RPL7P18124 248 aaKnown RBP8.39□□□□□ -1.07
LIMS2-210ENST00000413578 HOXA5P20719 270 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 S100A7P31151 101 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 CDKN1BP46527 198 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 FGL1Q08830 312 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 SPCS2Q15005 226 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 PSG3Q16557 428 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 OR10J6PQ8NGY7 276 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 GNPNAT1Q96EK6 184 aaPredicted RBP8.39□□□□□ -1.07
LIMS2-210ENST00000413578 DIRAS2Q96HU8 199 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 UHRF2Q96PU4 802 aa8.39□□□□□ -1.07
LIMS2-210ENST00000413578 PAIP2BQ9ULR5 123 aaKnown RBP8.39□□□□□ -1.07
LIMS2-210ENST00000413578 MRPS16Q9Y3D3 137 aaKnown RBP8.39□□□□□ -1.07
LIMS2-210ENST00000413578 H7BYZ3 331 aa8.38□□□□□ -1.07
LIMS2-210ENST00000413578 MED6O75586 246 aa8.38□□□□□ -1.07
LIMS2-210ENST00000413578 RHOBP62745 196 aa8.38□□□□□ -1.07
LIMS2-210ENST00000413578 RPP30P78346 268 aaKnown RBP8.38□□□□□ -1.07
LIMS2-210ENST00000413578 KIR3DS1Q14943 382 aa8.38□□□□□ -1.07
LIMS2-210ENST00000413578 TMEM128Q5BJH2 165 aa8.38□□□□□ -1.07
LIMS2-210ENST00000413578 CYP2G1PQ6ZSU1 146 aa8.38□□□□□ -1.07
LIMS2-210ENST00000413578 MCUBQ9NWR8 336 aa8.38□□□□□ -1.07
LIMS2-210ENST00000413578 HIGD1AQ9Y241 93 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms