RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 OXLD1Q5BKU9 147 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 KHDC1LQ5JSQ8 128 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 C18orf65Q6ZTR6 163 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 BPIFA4PQ86YQ2 179 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 OR4F5Q8NH21 305 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 C4orf3Q8WVX3 66 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 METTL26Q96S19 204 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 C20orf24Q9BUV8 137 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 YTHDF2Q9Y5A9 579 aaKnown RBP5.1□□□□□ -1.59
VPS41-204ENST00000413141 A0A1W2PRE2 83 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 A8MWP6 167 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 GGTLC3B5MD39 225 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 C11orf94C9JXX5 98 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 MRPS12O15235 138 aaKnown RBP5.09□□□□□ -1.59
VPS41-204ENST00000413141 ZNF207O43670 478 aaKnown RBP5.09□□□□□ -1.59
VPS41-204ENST00000413141 BUB3O43684 328 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 NDUFS6O75380 124 aaKnown RBP5.09□□□□□ -1.59
VPS41-204ENST00000413141 SRP19P09132 144 aaKnown RBP5.09□□□□□ -1.59
VPS41-204ENST00000413141 IGLC2P0DOY2 106 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 CD28P10747 220 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 RPL7P18124 248 aaKnown RBP5.09□□□□□ -1.59
VPS41-204ENST00000413141 CRYBB3P26998 211 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 RPEL1Q2QD12 228 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 DEFB136Q30KP8 78 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
VPS41-204ENST00000413141 CST9LP1Q5W188 147 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 GPHB5Q86YW7 130 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 CYB561D1Q8N8Q1 229 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 KLHL30-AS1Q8NEE0 82 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 OR4F17Q8NGA8 305 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 WFDC12Q8WWY7 111 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 OR4F4Q96R69 305 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 TXNDC17Q9BRA2 123 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 SLC35B3Q9H1N7 401 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 DAZ1Q9NQZ3 744 aaKnown RBP5.09□□□□□ -1.59
VPS41-204ENST00000413141 RNF24Q9Y225 148 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 RNF114Q9Y508 228 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 U3KQE9 123 aa5.09□□□□□ -1.59
VPS41-204ENST00000413141 TRBV19A0A075B6N1 114 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 F8W036 122 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 LINC01619G3V211 115 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 TMEM250H0YL14 139 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 H3BQ15 152 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 H3BTX0 84 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 PDE6DO43924 150 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 APOHP02749 345 aaPredicted RBP5.08□□□□□ -1.6
VPS41-204ENST00000413141 SNRPCP09234 159 aaKnown RBP5.08□□□□□ -1.6
VPS41-204ENST00000413141 NBEAP1P0C6P0 100 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 HIST1H1EP10412 219 aaKnown RBP5.08□□□□□ -1.6
VPS41-204ENST00000413141 NPPCP23582 126 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 HOXD3P31249 432 aaPredicted RBP5.08□□□□□ -1.6
VPS41-204ENST00000413141 MYCNOSP40205 109 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 FAM106AQ4KMX7 169 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 C10orf91Q5T1B1 145 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 C1orf194Q5T5A4 169 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 FAM90A2PQ658T7 463 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 HIST2H2BDQ6DRA6 164 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 REC114Q7Z4M0 266 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 C1QL4Q86Z23 238 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 CCDC28AQ8IWP9 274 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 OR8I2Q8N0Y5 310 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 C11orf44Q8N8P7 122 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 BLNKQ8WV28 456 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 GPR82Q96P67 336 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 CITED2Q99967 270 aaPredicted RBP5.08□□□□□ -1.6
VPS41-204ENST00000413141 SEC11CQ9BY50 192 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 ZNF586Q9NXT0 402 aa5.08□□□□□ -1.6
VPS41-204ENST00000413141 CARHSP1Q9Y2V2 147 aaKnown RBP5.08□□□□□ -1.6
VPS41-204ENST00000413141 IGHV3OR16-13A0A075B7E8 117 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 A0A087X0K7 114 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 IGHV3-49A0A0A0MS15 119 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 IGHV3-74A0A0B4J1X5 117 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 IGHV3-66A0A0C4DH42 116 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 IGHV7-4-1A0A0J9YVY3 117 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 SCO2A0A1W2PP80 73 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 ZNF320A2RRD8 509 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 TMEM213A2RRL7 107 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 F6UZH7 168 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 K7EMT4 169 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 LGALS9O00182 355 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 SLC17A3O00476 420 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 NDUFB4O95168 129 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 ATF4P18848 351 aaPredicted RBP5.07□□□□□ -1.6
VPS41-204ENST00000413141 CEBPGP53567 150 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 SLURP1P55000 103 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 SYNJ2BPP57105 145 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 FHL3Q13643 280 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 PDE6HQ13956 83 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 C16orf54Q6UWD8 224 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 C8orf86Q6ZUL3 223 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.07□□□□□ -1.6
VPS41-204ENST00000413141 OR11H1Q8NG94 326 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 GLMPQ8WWB7 406 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 C11orf52Q96A22 123 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 C17orf77Q96MU5 243 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 TCEAL7Q9BRU2 100 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 NKX6-2Q9C056 277 aaPredicted RBP5.07□□□□□ -1.6
VPS41-204ENST00000413141 Q9H3A6 140 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 UFC1Q9Y3C8 167 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 TSSC4Q9Y5U2 329 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms